Strain Fitness in Escherichia coli ECOR27 around NOLOHH_07690

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyibT and mtlR are separated by 11 nucleotidesmtlR and mtlD overlap by 1 nucleotidesmtlD and mtlA are separated by 229 nucleotides NOLOHH_07680: yibT - Uncharacterized protein YibT, at 1,466,630 to 1,466,839 yibT NOLOHH_07685: mtlR - mannitol operon repressor MtlR, at 1,466,851 to 1,467,438 mtlR NOLOHH_07690: mtlD - mannitol-1-phosphate 5-dehydrogenase, at 1,467,438 to 1,468,586 mtlD NOLOHH_07695: mtlA - PTS mannitol transporter subunit IICBA, at 1,468,816 to 1,470,729 mtlA Position (kb) 1467 1468 1469Strain fitness (log2 ratio) -2 -1 0 1 2at 1466.579 kb on + strandat 1466.579 kb on + strandat 1466.613 kb on - strandat 1466.615 kb on + strandat 1466.623 kb on + strandat 1466.623 kb on + strandat 1466.624 kb on - strandat 1466.624 kb on - strandat 1466.641 kb on - strandat 1466.711 kb on + strand, within yibTat 1466.711 kb on + strand, within yibTat 1466.712 kb on - strand, within yibTat 1466.775 kb on + strand, within yibTat 1466.775 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.777 kb on + strand, within yibTat 1466.778 kb on - strand, within yibTat 1466.778 kb on - strand, within yibTat 1466.778 kb on - strand, within yibTat 1466.778 kb on - strand, within yibTat 1466.778 kb on - strand, within yibTat 1466.781 kb on + strand, within yibTat 1466.781 kb on + strand, within yibTat 1466.781 kb on + strand, within yibTat 1466.781 kb on + strand, within yibTat 1466.781 kb on + strand, within yibTat 1466.781 kb on + strand, within yibTat 1466.782 kb on - strand, within yibTat 1466.782 kb on - strand, within yibTat 1466.782 kb on - strand, within yibTat 1466.795 kb on + strand, within yibTat 1466.796 kb on - strand, within yibTat 1466.799 kb on - strand, within yibTat 1466.799 kb on - strand, within yibTat 1466.826 kb on + strandat 1466.827 kb on - strandat 1466.852 kb on + strandat 1466.852 kb on + strandat 1466.937 kb on - strand, within mtlRat 1466.957 kb on + strand, within mtlRat 1467.060 kb on - strand, within mtlRat 1467.079 kb on + strand, within mtlRat 1467.080 kb on - strand, within mtlRat 1467.212 kb on - strand, within mtlRat 1467.212 kb on - strand, within mtlRat 1467.218 kb on + strand, within mtlRat 1467.218 kb on + strand, within mtlRat 1467.218 kb on + strand, within mtlRat 1467.218 kb on + strand, within mtlRat 1467.218 kb on + strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.219 kb on - strand, within mtlRat 1467.440 kb on - strandat 1467.453 kb on - strandat 1467.453 kb on - strandat 1467.638 kb on - strand, within mtlDat 1467.718 kb on - strand, within mtlDat 1467.718 kb on - strand, within mtlDat 1467.770 kb on - strand, within mtlDat 1467.770 kb on - strand, within mtlDat 1467.770 kb on - strand, within mtlDat 1467.770 kb on - strand, within mtlDat 1467.814 kb on - strand, within mtlDat 1467.924 kb on - strand, within mtlDat 1467.985 kb on - strand, within mtlDat 1468.304 kb on + strand, within mtlDat 1468.304 kb on + strand, within mtlDat 1468.304 kb on + strand, within mtlDat 1468.416 kb on + strand, within mtlDat 1468.451 kb on - strand, within mtlDat 1468.451 kb on - strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.454 kb on + strand, within mtlDat 1468.455 kb on - strand, within mtlDat 1468.455 kb on - strand, within mtlDat 1468.455 kb on - strand, within mtlDat 1468.455 kb on - strand, within mtlDat 1468.479 kb on + strandat 1468.479 kb on + strandat 1468.479 kb on + strandat 1468.480 kb on - strandat 1468.480 kb on - strandat 1468.480 kb on - strandat 1468.480 kb on - strandat 1468.480 kb on - strandat 1468.575 kb on + strandat 1468.576 kb on - strandat 1468.590 kb on - strandat 1468.590 kb on - strandat 1468.590 kb on - strandat 1468.590 kb on - strandat 1468.747 kb on + strandat 1468.748 kb on - strandat 1468.778 kb on + strandat 1468.779 kb on - strandat 1468.817 kb on + strandat 1468.818 kb on - strandat 1468.821 kb on + strandat 1468.821 kb on + strandat 1468.821 kb on + strandat 1468.822 kb on - strandat 1468.822 kb on - strandat 1468.822 kb on - strandat 1468.822 kb on - strandat 1468.822 kb on - strandat 1468.822 kb on - strandat 1468.822 kb on - strandat 1468.921 kb on - strandat 1468.954 kb on - strandat 1469.042 kb on - strand, within mtlAat 1469.096 kb on + strand, within mtlAat 1469.096 kb on + strand, within mtlAat 1469.096 kb on + strand, within mtlAat 1469.096 kb on + strand, within mtlAat 1469.097 kb on - strand, within mtlAat 1469.139 kb on - strand, within mtlAat 1469.154 kb on - strand, within mtlAat 1469.154 kb on - strand, within mtlAat 1469.296 kb on + strand, within mtlAat 1469.357 kb on + strand, within mtlAat 1469.358 kb on - strand, within mtlAat 1469.358 kb on - strand, within mtlAat 1469.358 kb on - strand, within mtlAat 1469.358 kb on - strand, within mtlAat 1469.358 kb on - strand, within mtlAat 1469.358 kb on - strand, within mtlAat 1469.391 kb on + strand, within mtlAat 1469.391 kb on + strand, within mtlAat 1469.391 kb on + strand, within mtlAat 1469.391 kb on + strand, within mtlAat 1469.392 kb on - strand, within mtlAat 1469.392 kb on - strand, within mtlAat 1469.392 kb on - strand, within mtlAat 1469.392 kb on - strand, within mtlAat 1469.392 kb on - strand, within mtlAat 1469.490 kb on + strand, within mtlAat 1469.491 kb on - strand, within mtlAat 1469.493 kb on + strand, within mtlAat 1469.493 kb on + strand, within mtlAat 1469.532 kb on + strand, within mtlA

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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1,466,579 + -1.3
1,466,579 + -0.1
1,466,613 - -0.5
1,466,615 + -0.1
1,466,623 + -1.5
1,466,623 + -0.6
1,466,624 - -0.2
1,466,624 - -0.3
1,466,641 - -0.4
1,466,711 + yibT NOLOHH_07680 0.39 -1.1
1,466,711 + yibT NOLOHH_07680 0.39 -0.4
1,466,712 - yibT NOLOHH_07680 0.39 -1.1
1,466,775 + yibT NOLOHH_07680 0.69 -0.5
1,466,775 + yibT NOLOHH_07680 0.69 +0.2
1,466,777 + yibT NOLOHH_07680 0.70 +0.4
1,466,777 + yibT NOLOHH_07680 0.70 -0.2
1,466,777 + yibT NOLOHH_07680 0.70 +0.2
1,466,777 + yibT NOLOHH_07680 0.70 +0.3
1,466,777 + yibT NOLOHH_07680 0.70 +0.5
1,466,777 + yibT NOLOHH_07680 0.70 -0.1
1,466,777 + yibT NOLOHH_07680 0.70 +1.0
1,466,777 + yibT NOLOHH_07680 0.70 +0.3
1,466,777 + yibT NOLOHH_07680 0.70 +1.4
1,466,778 - yibT NOLOHH_07680 0.70 +0.1
1,466,778 - yibT NOLOHH_07680 0.70 -0.6
1,466,778 - yibT NOLOHH_07680 0.70 -0.8
1,466,778 - yibT NOLOHH_07680 0.70 -0.3
1,466,778 - yibT NOLOHH_07680 0.70 -2.5
1,466,781 + yibT NOLOHH_07680 0.72 +0.0
1,466,781 + yibT NOLOHH_07680 0.72 +0.5
1,466,781 + yibT NOLOHH_07680 0.72 +0.1
1,466,781 + yibT NOLOHH_07680 0.72 -0.6
1,466,781 + yibT NOLOHH_07680 0.72 +0.0
1,466,781 + yibT NOLOHH_07680 0.72 -0.1
1,466,782 - yibT NOLOHH_07680 0.72 +0.9
1,466,782 - yibT NOLOHH_07680 0.72 +1.7
1,466,782 - yibT NOLOHH_07680 0.72 +1.1
1,466,795 + yibT NOLOHH_07680 0.79 -0.7
1,466,796 - yibT NOLOHH_07680 0.79 +0.9
1,466,799 - yibT NOLOHH_07680 0.80 +1.0
1,466,799 - yibT NOLOHH_07680 0.80 -0.5
1,466,826 + -0.4
1,466,827 - -0.2
1,466,852 + +0.5
1,466,852 + +0.2
1,466,937 - mtlR NOLOHH_07685 0.15 -1.1
1,466,957 + mtlR NOLOHH_07685 0.18 +0.5
1,467,060 - mtlR NOLOHH_07685 0.36 -1.8
1,467,079 + mtlR NOLOHH_07685 0.39 +0.5
1,467,080 - mtlR NOLOHH_07685 0.39 -0.8
1,467,212 - mtlR NOLOHH_07685 0.61 +0.8
1,467,212 - mtlR NOLOHH_07685 0.61 -1.5
1,467,218 + mtlR NOLOHH_07685 0.62 +0.5
1,467,218 + mtlR NOLOHH_07685 0.62 -0.5
1,467,218 + mtlR NOLOHH_07685 0.62 +0.5
1,467,218 + mtlR NOLOHH_07685 0.62 +2.5
1,467,218 + mtlR NOLOHH_07685 0.62 -0.1
1,467,219 - mtlR NOLOHH_07685 0.63 -0.3
1,467,219 - mtlR NOLOHH_07685 0.63 +1.1
1,467,219 - mtlR NOLOHH_07685 0.63 +0.4
1,467,219 - mtlR NOLOHH_07685 0.63 -0.5
1,467,219 - mtlR NOLOHH_07685 0.63 -0.2
1,467,219 - mtlR NOLOHH_07685 0.63 +0.5
1,467,219 - mtlR NOLOHH_07685 0.63 -0.3
1,467,219 - mtlR NOLOHH_07685 0.63 +1.1
1,467,219 - mtlR NOLOHH_07685 0.63 -1.1
1,467,219 - mtlR NOLOHH_07685 0.63 +0.5
1,467,219 - mtlR NOLOHH_07685 0.63 +0.2
1,467,219 - mtlR NOLOHH_07685 0.63 -0.6
1,467,219 - mtlR NOLOHH_07685 0.63 -0.8
1,467,219 - mtlR NOLOHH_07685 0.63 -2.1
1,467,440 - -1.5
1,467,453 - +0.2
1,467,453 - +0.3
1,467,638 - mtlD NOLOHH_07690 0.17 -0.3
1,467,718 - mtlD NOLOHH_07690 0.24 +1.3
1,467,718 - mtlD NOLOHH_07690 0.24 +0.4
1,467,770 - mtlD NOLOHH_07690 0.29 -1.9
1,467,770 - mtlD NOLOHH_07690 0.29 +0.5
1,467,770 - mtlD NOLOHH_07690 0.29 -0.7
1,467,770 - mtlD NOLOHH_07690 0.29 -0.9
1,467,814 - mtlD NOLOHH_07690 0.33 -0.5
1,467,924 - mtlD NOLOHH_07690 0.42 -0.5
1,467,985 - mtlD NOLOHH_07690 0.48 -0.8
1,468,304 + mtlD NOLOHH_07690 0.75 +1.1
1,468,304 + mtlD NOLOHH_07690 0.75 +0.5
1,468,304 + mtlD NOLOHH_07690 0.75 -1.1
1,468,416 + mtlD NOLOHH_07690 0.85 -0.1
1,468,451 - mtlD NOLOHH_07690 0.88 +2.3
1,468,451 - mtlD NOLOHH_07690 0.88 -0.3
1,468,454 + mtlD NOLOHH_07690 0.88 +0.5
1,468,454 + mtlD NOLOHH_07690 0.88 -0.5
1,468,454 + mtlD NOLOHH_07690 0.88 +0.5
1,468,454 + mtlD NOLOHH_07690 0.88 +0.5
1,468,454 + mtlD NOLOHH_07690 0.88 -1.1
1,468,454 + mtlD NOLOHH_07690 0.88 +0.5
1,468,454 + mtlD NOLOHH_07690 0.88 +0.5
1,468,454 + mtlD NOLOHH_07690 0.88 +1.5
1,468,455 - mtlD NOLOHH_07690 0.89 +1.3
1,468,455 - mtlD NOLOHH_07690 0.89 -0.5
1,468,455 - mtlD NOLOHH_07690 0.89 +0.5
1,468,455 - mtlD NOLOHH_07690 0.89 -0.5
1,468,479 + -0.1
1,468,479 + -0.8
1,468,479 + -0.5
1,468,480 - +0.6
1,468,480 - +0.1
1,468,480 - +0.5
1,468,480 - -0.1
1,468,480 - -0.1
1,468,575 + +0.5
1,468,576 - +1.1
1,468,590 - +0.5
1,468,590 - +0.9
1,468,590 - +0.9
1,468,590 - +0.7
1,468,747 + +0.1
1,468,748 - -0.3
1,468,778 + +0.7
1,468,779 - +1.1
1,468,817 + -1.1
1,468,818 - +0.2
1,468,821 + +0.1
1,468,821 + -0.1
1,468,821 + +1.2
1,468,822 - -1.1
1,468,822 - -1.1
1,468,822 - -0.8
1,468,822 - -1.5
1,468,822 - -0.5
1,468,822 - +0.5
1,468,822 - -0.7
1,468,921 - -0.4
1,468,954 - -0.1
1,469,042 - mtlA NOLOHH_07695 0.12 -0.2
1,469,096 + mtlA NOLOHH_07695 0.15 -0.3
1,469,096 + mtlA NOLOHH_07695 0.15 +0.4
1,469,096 + mtlA NOLOHH_07695 0.15 -1.1
1,469,096 + mtlA NOLOHH_07695 0.15 -0.0
1,469,097 - mtlA NOLOHH_07695 0.15 +0.4
1,469,139 - mtlA NOLOHH_07695 0.17 -0.9
1,469,154 - mtlA NOLOHH_07695 0.18 +0.4
1,469,154 - mtlA NOLOHH_07695 0.18 +0.3
1,469,296 + mtlA NOLOHH_07695 0.25 -0.3
1,469,357 + mtlA NOLOHH_07695 0.28 -0.6
1,469,358 - mtlA NOLOHH_07695 0.28 -0.5
1,469,358 - mtlA NOLOHH_07695 0.28 -0.8
1,469,358 - mtlA NOLOHH_07695 0.28 +0.1
1,469,358 - mtlA NOLOHH_07695 0.28 +0.6
1,469,358 - mtlA NOLOHH_07695 0.28 -0.2
1,469,358 - mtlA NOLOHH_07695 0.28 -0.1
1,469,391 + mtlA NOLOHH_07695 0.30 -0.1
1,469,391 + mtlA NOLOHH_07695 0.30 -0.0
1,469,391 + mtlA NOLOHH_07695 0.30 -0.7
1,469,391 + mtlA NOLOHH_07695 0.30 +0.9
1,469,392 - mtlA NOLOHH_07695 0.30 +1.5
1,469,392 - mtlA NOLOHH_07695 0.30 +0.8
1,469,392 - mtlA NOLOHH_07695 0.30 -1.5
1,469,392 - mtlA NOLOHH_07695 0.30 +0.2
1,469,392 - mtlA NOLOHH_07695 0.30 -0.2
1,469,490 + mtlA NOLOHH_07695 0.35 -0.0
1,469,491 - mtlA NOLOHH_07695 0.35 +0.3
1,469,493 + mtlA NOLOHH_07695 0.35 -0.6
1,469,493 + mtlA NOLOHH_07695 0.35 -0.6
1,469,532 + mtlA NOLOHH_07695 0.37 -0.2

Or see this region's nucleotide sequence