Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ilvG and ilvX are separated by 2 nucleotides ilvX and yifB are separated by 537 nucleotides
NOLOHH_06790: ilvG - acetolactate synthase 2 catalytic subunit, at 1,282,419 to 1,284,065
ilvG
NOLOHH_06795: ilvX - Uncharacterized protein IlvX, at 1,284,068 to 1,284,118
ilvX
NOLOHH_06800: yifB - YifB family Mg chelatase-like AAA ATPase, at 1,284,656 to 1,286,176
yifB
Position (kb)
1284
1285 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1283.087 kb on + strand, within ilvG at 1283.087 kb on + strand, within ilvG at 1283.087 kb on + strand, within ilvG at 1283.088 kb on - strand, within ilvG at 1283.091 kb on + strand, within ilvG at 1283.092 kb on - strand, within ilvG at 1283.103 kb on + strand, within ilvG at 1283.124 kb on + strand, within ilvG at 1283.124 kb on + strand, within ilvG at 1283.125 kb on - strand, within ilvG at 1283.125 kb on - strand, within ilvG at 1283.125 kb on - strand, within ilvG at 1283.125 kb on - strand, within ilvG at 1283.136 kb on + strand, within ilvG at 1283.136 kb on + strand, within ilvG at 1283.136 kb on + strand, within ilvG at 1283.136 kb on + strand, within ilvG at 1283.137 kb on - strand, within ilvG at 1283.137 kb on - strand, within ilvG at 1283.137 kb on - strand, within ilvG at 1283.137 kb on - strand, within ilvG at 1283.137 kb on - strand, within ilvG at 1283.189 kb on + strand, within ilvG at 1283.190 kb on - strand, within ilvG at 1283.335 kb on + strand, within ilvG at 1283.335 kb on + strand, within ilvG at 1283.336 kb on - strand, within ilvG at 1283.336 kb on - strand, within ilvG at 1283.338 kb on + strand, within ilvG at 1283.418 kb on + strand, within ilvG at 1283.461 kb on + strand, within ilvG at 1283.461 kb on + strand, within ilvG at 1283.461 kb on + strand, within ilvG at 1283.461 kb on + strand, within ilvG at 1283.461 kb on + strand, within ilvG at 1283.462 kb on - strand, within ilvG at 1283.462 kb on - strand, within ilvG at 1283.462 kb on - strand, within ilvG at 1283.462 kb on - strand, within ilvG at 1283.805 kb on + strand, within ilvG at 1283.805 kb on + strand, within ilvG at 1283.806 kb on - strand, within ilvG at 1283.806 kb on - strand, within ilvG at 1283.806 kb on - strand, within ilvG at 1283.806 kb on - strand, within ilvG at 1283.865 kb on - strand, within ilvG at 1283.868 kb on + strand, within ilvG at 1283.868 kb on + strand, within ilvG at 1283.868 kb on + strand, within ilvG at 1283.868 kb on + strand, within ilvG at 1283.868 kb on + strand, within ilvG at 1283.869 kb on - strand, within ilvG at 1283.869 kb on - strand, within ilvG at 1283.869 kb on - strand, within ilvG at 1283.869 kb on - strand, within ilvG at 1283.869 kb on - strand, within ilvG at 1283.962 kb on + strand at 1283.962 kb on + strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.963 kb on - strand at 1283.974 kb on + strand at 1283.975 kb on - strand at 1284.042 kb on + strand at 1284.042 kb on + strand at 1284.042 kb on + strand at 1284.042 kb on + strand at 1284.042 kb on + strand at 1284.043 kb on - strand at 1284.043 kb on - strand at 1284.043 kb on - strand at 1284.043 kb on - strand at 1284.043 kb on - strand at 1284.065 kb on + strand at 1284.065 kb on + strand at 1284.065 kb on + strand at 1284.065 kb on + strand at 1284.066 kb on - strand at 1284.069 kb on + strand at 1284.070 kb on - strand at 1284.070 kb on - strand at 1284.070 kb on - strand at 1284.142 kb on + strand at 1284.280 kb on - strand at 1284.289 kb on + strand at 1284.289 kb on + strand at 1284.290 kb on - strand at 1284.366 kb on - strand at 1284.368 kb on + strand at 1284.495 kb on - strand at 1284.626 kb on - strand at 1284.633 kb on + strand at 1284.633 kb on + strand at 1284.655 kb on + strand at 1284.655 kb on + strand at 1284.655 kb on + strand at 1284.655 kb on + strand at 1284.655 kb on + strand at 1284.655 kb on + strand at 1284.656 kb on - strand at 1284.656 kb on - strand at 1284.656 kb on - strand at 1284.656 kb on - strand at 1284.697 kb on - strand at 1284.723 kb on + strand at 1284.723 kb on + strand at 1284.724 kb on - strand at 1284.724 kb on - strand at 1284.724 kb on - strand at 1284.724 kb on - strand at 1284.724 kb on - strand at 1284.724 kb on - strand at 1284.724 kb on - strand at 1284.727 kb on + strand at 1284.727 kb on + strand at 1284.727 kb on + strand at 1284.728 kb on - strand at 1284.728 kb on - strand at 1284.728 kb on - strand at 1284.728 kb on - strand at 1284.728 kb on - strand at 1284.728 kb on - strand at 1284.728 kb on - strand at 1284.728 kb on - strand at 1284.751 kb on - strand at 1284.751 kb on - strand at 1284.814 kb on + strand, within yifB at 1284.876 kb on + strand, within yifB at 1284.877 kb on - strand, within yifB at 1284.877 kb on - strand, within yifB at 1284.877 kb on - strand, within yifB at 1284.903 kb on + strand, within yifB at 1284.903 kb on + strand, within yifB at 1284.904 kb on - strand, within yifB at 1284.904 kb on - strand, within yifB at 1284.904 kb on - strand, within yifB at 1284.904 kb on - strand, within yifB at 1284.904 kb on - strand, within yifB at 1284.904 kb on - strand, within yifB at 1284.904 kb on - strand, within yifB at 1284.907 kb on + strand, within yifB at 1284.953 kb on - strand, within yifB at 1284.957 kb on + strand, within yifB at 1284.957 kb on + strand, within yifB at 1284.957 kb on + strand, within yifB at 1284.958 kb on - strand, within yifB at 1284.965 kb on + strand, within yifB at 1284.966 kb on - strand, within yifB at 1285.042 kb on + strand, within yifB at 1285.042 kb on + strand, within yifB at 1285.042 kb on + strand, within yifB at 1285.042 kb on + strand, within yifB at 1285.042 kb on + strand, within yifB at 1285.045 kb on + strand, within yifB at 1285.045 kb on + strand, within yifB at 1285.045 kb on + strand, within yifB at 1285.045 kb on + strand, within yifB at 1285.045 kb on + strand, within yifB at 1285.046 kb on - strand, within yifB at 1285.046 kb on - strand, within yifB at 1285.099 kb on - strand, within yifB at 1285.102 kb on + strand, within yifB at 1285.103 kb on - strand, within yifB
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 1,283,087 + ilvG NOLOHH_06790 0.41 +0.6 1,283,087 + ilvG NOLOHH_06790 0.41 -0.7 1,283,087 + ilvG NOLOHH_06790 0.41 +0.7 1,283,088 - ilvG NOLOHH_06790 0.41 -0.3 1,283,091 + ilvG NOLOHH_06790 0.41 -1.4 1,283,092 - ilvG NOLOHH_06790 0.41 +0.4 1,283,103 + ilvG NOLOHH_06790 0.42 -0.4 1,283,124 + ilvG NOLOHH_06790 0.43 +0.1 1,283,124 + ilvG NOLOHH_06790 0.43 -0.7 1,283,125 - ilvG NOLOHH_06790 0.43 -0.3 1,283,125 - ilvG NOLOHH_06790 0.43 +0.3 1,283,125 - ilvG NOLOHH_06790 0.43 -0.5 1,283,125 - ilvG NOLOHH_06790 0.43 -1.7 1,283,136 + ilvG NOLOHH_06790 0.44 -1.2 1,283,136 + ilvG NOLOHH_06790 0.44 +1.3 1,283,136 + ilvG NOLOHH_06790 0.44 -0.4 1,283,136 + ilvG NOLOHH_06790 0.44 +0.2 1,283,137 - ilvG NOLOHH_06790 0.44 +1.2 1,283,137 - ilvG NOLOHH_06790 0.44 -0.4 1,283,137 - ilvG NOLOHH_06790 0.44 +0.4 1,283,137 - ilvG NOLOHH_06790 0.44 +0.1 1,283,137 - ilvG NOLOHH_06790 0.44 -0.3 1,283,189 + ilvG NOLOHH_06790 0.47 +0.9 1,283,190 - ilvG NOLOHH_06790 0.47 +0.4 1,283,335 + ilvG NOLOHH_06790 0.56 -0.6 1,283,335 + ilvG NOLOHH_06790 0.56 -0.3 1,283,336 - ilvG NOLOHH_06790 0.56 +1.1 1,283,336 - ilvG NOLOHH_06790 0.56 +0.3 1,283,338 + ilvG NOLOHH_06790 0.56 -0.7 1,283,418 + ilvG NOLOHH_06790 0.61 +0.0 1,283,461 + ilvG NOLOHH_06790 0.63 +1.3 1,283,461 + ilvG NOLOHH_06790 0.63 -1.7 1,283,461 + ilvG NOLOHH_06790 0.63 -1.7 1,283,461 + ilvG NOLOHH_06790 0.63 +0.4 1,283,461 + ilvG NOLOHH_06790 0.63 +0.6 1,283,462 - ilvG NOLOHH_06790 0.63 -0.4 1,283,462 - ilvG NOLOHH_06790 0.63 +0.8 1,283,462 - ilvG NOLOHH_06790 0.63 -0.4 1,283,462 - ilvG NOLOHH_06790 0.63 +0.9 1,283,805 + ilvG NOLOHH_06790 0.84 -0.1 1,283,805 + ilvG NOLOHH_06790 0.84 -1.7 1,283,806 - ilvG NOLOHH_06790 0.84 -0.7 1,283,806 - ilvG NOLOHH_06790 0.84 +0.4 1,283,806 - ilvG NOLOHH_06790 0.84 -0.4 1,283,806 - ilvG NOLOHH_06790 0.84 -0.2 1,283,865 - ilvG NOLOHH_06790 0.88 -0.3 1,283,868 + ilvG NOLOHH_06790 0.88 +0.7 1,283,868 + ilvG NOLOHH_06790 0.88 +0.3 1,283,868 + ilvG NOLOHH_06790 0.88 +0.4 1,283,868 + ilvG NOLOHH_06790 0.88 -0.9 1,283,868 + ilvG NOLOHH_06790 0.88 -0.6 1,283,869 - ilvG NOLOHH_06790 0.88 -2.4 1,283,869 - ilvG NOLOHH_06790 0.88 -0.1 1,283,869 - ilvG NOLOHH_06790 0.88 +0.3 1,283,869 - ilvG NOLOHH_06790 0.88 -0.2 1,283,869 - ilvG NOLOHH_06790 0.88 +0.5 1,283,962 + +0.6 1,283,962 + +1.6 1,283,963 - +0.5 1,283,963 - +0.2 1,283,963 - -0.4 1,283,963 - -0.4 1,283,963 - -0.2 1,283,963 - +0.6 1,283,963 - -0.6 1,283,963 - -0.1 1,283,963 - -1.7 1,283,963 - +0.1 1,283,974 + -0.2 1,283,975 - +0.2 1,284,042 + +0.7 1,284,042 + -0.7 1,284,042 + -0.0 1,284,042 + +0.1 1,284,042 + +0.6 1,284,043 - +1.1 1,284,043 - +1.2 1,284,043 - -0.1 1,284,043 - -1.0 1,284,043 - -0.4 1,284,065 + -0.6 1,284,065 + +1.1 1,284,065 + +0.5 1,284,065 + -0.2 1,284,066 - -1.0 1,284,069 + -0.4 1,284,070 - -0.8 1,284,070 - -0.3 1,284,070 - +0.8 1,284,142 + +0.6 1,284,280 - -0.9 1,284,289 + +0.9 1,284,289 + -0.3 1,284,290 - -0.2 1,284,366 - -0.4 1,284,368 + -0.2 1,284,495 - -0.6 1,284,626 - +0.2 1,284,633 + -1.6 1,284,633 + -0.4 1,284,655 + -0.1 1,284,655 + +0.9 1,284,655 + +0.6 1,284,655 + -0.3 1,284,655 + +0.2 1,284,655 + +0.8 1,284,656 - -0.6 1,284,656 - -0.2 1,284,656 - -0.4 1,284,656 - +0.1 1,284,697 - -0.2 1,284,723 + -0.4 1,284,723 + +0.5 1,284,724 - +0.7 1,284,724 - +1.4 1,284,724 - -0.4 1,284,724 - +0.3 1,284,724 - -1.3 1,284,724 - +2.0 1,284,724 - -1.0 1,284,727 + -0.5 1,284,727 + +0.3 1,284,727 + +0.6 1,284,728 - -0.7 1,284,728 - -1.3 1,284,728 - +1.0 1,284,728 - -0.1 1,284,728 - +0.6 1,284,728 - +1.0 1,284,728 - -0.0 1,284,728 - +0.8 1,284,751 - +1.6 1,284,751 - +0.6 1,284,814 + yifB NOLOHH_06800 0.10 +0.3 1,284,876 + yifB NOLOHH_06800 0.14 +0.1 1,284,877 - yifB NOLOHH_06800 0.15 -0.9 1,284,877 - yifB NOLOHH_06800 0.15 -0.6 1,284,877 - yifB NOLOHH_06800 0.15 +0.1 1,284,903 + yifB NOLOHH_06800 0.16 -0.4 1,284,903 + yifB NOLOHH_06800 0.16 -0.9 1,284,904 - yifB NOLOHH_06800 0.16 +0.5 1,284,904 - yifB NOLOHH_06800 0.16 -0.4 1,284,904 - yifB NOLOHH_06800 0.16 +1.2 1,284,904 - yifB NOLOHH_06800 0.16 -1.3 1,284,904 - yifB NOLOHH_06800 0.16 -0.7 1,284,904 - yifB NOLOHH_06800 0.16 +1.0 1,284,904 - yifB NOLOHH_06800 0.16 +0.5 1,284,907 + yifB NOLOHH_06800 0.17 +0.6 1,284,953 - yifB NOLOHH_06800 0.20 -0.4 1,284,957 + yifB NOLOHH_06800 0.20 +0.6 1,284,957 + yifB NOLOHH_06800 0.20 +0.7 1,284,957 + yifB NOLOHH_06800 0.20 +0.6 1,284,958 - yifB NOLOHH_06800 0.20 -0.6 1,284,965 + yifB NOLOHH_06800 0.20 -1.4 1,284,966 - yifB NOLOHH_06800 0.20 -1.7 1,285,042 + yifB NOLOHH_06800 0.25 -0.0 1,285,042 + yifB NOLOHH_06800 0.25 -0.4 1,285,042 + yifB NOLOHH_06800 0.25 -0.0 1,285,042 + yifB NOLOHH_06800 0.25 -1.2 1,285,042 + yifB NOLOHH_06800 0.25 -0.3 1,285,045 + yifB NOLOHH_06800 0.26 -0.8 1,285,045 + yifB NOLOHH_06800 0.26 +0.1 1,285,045 + yifB NOLOHH_06800 0.26 +0.5 1,285,045 + yifB NOLOHH_06800 0.26 -2.1 1,285,045 + yifB NOLOHH_06800 0.26 -0.2 1,285,046 - yifB NOLOHH_06800 0.26 -0.0 1,285,046 - yifB NOLOHH_06800 0.26 -1.0 1,285,099 - yifB NOLOHH_06800 0.29 -0.4 1,285,102 + yifB NOLOHH_06800 0.29 +0.1 1,285,103 - yifB NOLOHH_06800 0.29 -0.3
Or see this region's nucleotide sequence