Strain Fitness in Escherichia coli ECOR27 around NOLOHH_06740

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntrhlB and gppA are separated by 133 nucleotidesgppA and rep are separated by 46 nucleotides NOLOHH_06735: rhlB - ATP-dependent RNA helicase RhlB, at 1,268,994 to 1,270,259 rhlB NOLOHH_06740: gppA - guanosine-5'-triphosphate,3'-diphosphate diphosphatase, at 1,270,393 to 1,271,877 gppA NOLOHH_06745: rep - DNA helicase Rep, at 1,271,924 to 1,273,945 rep Position (kb) 1270 1271 1272Strain fitness (log2 ratio) -2 -1 0 1 2at 1269.427 kb on + strand, within rhlBat 1269.427 kb on + strand, within rhlBat 1269.428 kb on - strand, within rhlBat 1269.428 kb on - strand, within rhlBat 1269.435 kb on + strand, within rhlBat 1269.436 kb on - strand, within rhlBat 1269.436 kb on - strand, within rhlBat 1269.476 kb on - strand, within rhlBat 1269.504 kb on + strand, within rhlBat 1269.505 kb on - strand, within rhlBat 1269.518 kb on + strand, within rhlBat 1269.521 kb on + strand, within rhlBat 1269.521 kb on + strand, within rhlBat 1269.522 kb on - strand, within rhlBat 1269.522 kb on - strand, within rhlBat 1269.528 kb on - strand, within rhlBat 1269.645 kb on + strand, within rhlBat 1269.646 kb on - strand, within rhlBat 1269.647 kb on + strand, within rhlBat 1269.647 kb on + strand, within rhlBat 1269.647 kb on + strand, within rhlBat 1269.647 kb on + strand, within rhlBat 1269.648 kb on - strand, within rhlBat 1269.684 kb on - strand, within rhlBat 1269.686 kb on + strand, within rhlBat 1269.687 kb on - strand, within rhlBat 1269.687 kb on - strand, within rhlBat 1269.687 kb on - strand, within rhlBat 1269.710 kb on + strand, within rhlBat 1269.710 kb on + strand, within rhlBat 1269.773 kb on + strand, within rhlBat 1269.884 kb on + strand, within rhlBat 1269.884 kb on + strand, within rhlBat 1269.956 kb on + strand, within rhlBat 1269.957 kb on - strand, within rhlBat 1269.980 kb on + strand, within rhlBat 1269.980 kb on + strand, within rhlBat 1269.981 kb on - strand, within rhlBat 1269.984 kb on + strand, within rhlBat 1269.984 kb on + strand, within rhlBat 1269.984 kb on + strand, within rhlBat 1269.985 kb on - strand, within rhlBat 1270.011 kb on + strand, within rhlBat 1270.012 kb on - strand, within rhlBat 1270.012 kb on - strand, within rhlBat 1270.023 kb on - strand, within rhlBat 1270.061 kb on + strand, within rhlBat 1270.062 kb on - strand, within rhlBat 1270.083 kb on + strand, within rhlBat 1270.084 kb on - strand, within rhlBat 1270.084 kb on - strand, within rhlBat 1270.103 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.113 kb on + strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.114 kb on - strand, within rhlBat 1270.143 kb on + strandat 1270.144 kb on - strandat 1270.202 kb on + strandat 1270.202 kb on + strandat 1270.202 kb on + strandat 1270.258 kb on - strandat 1270.261 kb on + strandat 1270.261 kb on + strandat 1270.261 kb on + strandat 1270.262 kb on - strandat 1270.272 kb on - strandat 1270.292 kb on + strandat 1270.328 kb on - strandat 1270.328 kb on - strandat 1270.328 kb on - strandat 1270.328 kb on - strandat 1270.328 kb on - strandat 1270.332 kb on + strandat 1270.332 kb on + strandat 1270.332 kb on + strandat 1270.332 kb on + strandat 1270.332 kb on + strandat 1270.332 kb on + strandat 1270.332 kb on + strandat 1270.333 kb on - strandat 1270.333 kb on - strandat 1270.333 kb on - strandat 1270.333 kb on - strandat 1270.333 kb on - strandat 1270.335 kb on + strandat 1270.335 kb on + strandat 1270.335 kb on + strandat 1270.335 kb on + strandat 1270.336 kb on - strandat 1270.336 kb on - strandat 1270.336 kb on - strandat 1270.392 kb on + strandat 1270.393 kb on - strandat 1270.393 kb on - strandat 1270.440 kb on + strandat 1270.441 kb on - strandat 1270.450 kb on - strandat 1270.551 kb on + strand, within gppAat 1270.611 kb on + strand, within gppAat 1270.652 kb on + strand, within gppAat 1270.653 kb on - strand, within gppAat 1270.653 kb on - strand, within gppAat 1270.653 kb on - strand, within gppAat 1270.681 kb on - strand, within gppAat 1270.754 kb on - strand, within gppAat 1270.808 kb on + strand, within gppAat 1270.809 kb on - strand, within gppAat 1270.903 kb on + strand, within gppAat 1270.970 kb on + strand, within gppAat 1270.970 kb on + strand, within gppAat 1270.971 kb on - strand, within gppAat 1270.992 kb on - strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.241 kb on + strand, within gppAat 1271.242 kb on - strand, within gppAat 1271.242 kb on - strand, within gppAat 1271.242 kb on - strand, within gppAat 1271.242 kb on - strand, within gppAat 1271.242 kb on - strand, within gppAat 1271.242 kb on - strand, within gppAat 1271.281 kb on + strand, within gppAat 1271.282 kb on - strand, within gppAat 1271.335 kb on - strand, within gppAat 1271.337 kb on + strand, within gppAat 1271.352 kb on + strand, within gppAat 1271.353 kb on - strand, within gppAat 1271.528 kb on - strand, within gppAat 1271.538 kb on + strand, within gppAat 1271.608 kb on - strand, within gppAat 1271.608 kb on - strand, within gppAat 1271.744 kb on + strandat 1271.752 kb on - strandat 1271.820 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.848 kb on + strandat 1271.849 kb on - strandat 1271.849 kb on - strandat 1271.849 kb on - strandat 1271.849 kb on - strandat 1271.875 kb on + strandat 1271.882 kb on + strandat 1271.883 kb on - strandat 1271.883 kb on - strandat 1271.883 kb on - strandat 1271.925 kb on + strandat 1271.925 kb on + strandat 1271.925 kb on + strandat 1271.926 kb on - strandat 1271.926 kb on - strandat 1272.157 kb on - strand, within repat 1272.496 kb on - strand, within rep

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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1,269,427 + rhlB NOLOHH_06735 0.34 +0.2
1,269,427 + rhlB NOLOHH_06735 0.34 +1.1
1,269,428 - rhlB NOLOHH_06735 0.34 -0.7
1,269,428 - rhlB NOLOHH_06735 0.34 +0.5
1,269,435 + rhlB NOLOHH_06735 0.35 +0.7
1,269,436 - rhlB NOLOHH_06735 0.35 +0.6
1,269,436 - rhlB NOLOHH_06735 0.35 -1.6
1,269,476 - rhlB NOLOHH_06735 0.38 -0.7
1,269,504 + rhlB NOLOHH_06735 0.40 +0.8
1,269,505 - rhlB NOLOHH_06735 0.40 +0.6
1,269,518 + rhlB NOLOHH_06735 0.41 +0.6
1,269,521 + rhlB NOLOHH_06735 0.42 -0.6
1,269,521 + rhlB NOLOHH_06735 0.42 -0.2
1,269,522 - rhlB NOLOHH_06735 0.42 +0.3
1,269,522 - rhlB NOLOHH_06735 0.42 -0.5
1,269,528 - rhlB NOLOHH_06735 0.42 -2.4
1,269,645 + rhlB NOLOHH_06735 0.51 +0.4
1,269,646 - rhlB NOLOHH_06735 0.52 -0.7
1,269,647 + rhlB NOLOHH_06735 0.52 -0.0
1,269,647 + rhlB NOLOHH_06735 0.52 -1.8
1,269,647 + rhlB NOLOHH_06735 0.52 +0.2
1,269,647 + rhlB NOLOHH_06735 0.52 +0.7
1,269,648 - rhlB NOLOHH_06735 0.52 +1.0
1,269,684 - rhlB NOLOHH_06735 0.55 -1.4
1,269,686 + rhlB NOLOHH_06735 0.55 +1.0
1,269,687 - rhlB NOLOHH_06735 0.55 +0.4
1,269,687 - rhlB NOLOHH_06735 0.55 -0.2
1,269,687 - rhlB NOLOHH_06735 0.55 -0.4
1,269,710 + rhlB NOLOHH_06735 0.57 +0.6
1,269,710 + rhlB NOLOHH_06735 0.57 +0.6
1,269,773 + rhlB NOLOHH_06735 0.62 -0.8
1,269,884 + rhlB NOLOHH_06735 0.70 -0.3
1,269,884 + rhlB NOLOHH_06735 0.70 -0.5
1,269,956 + rhlB NOLOHH_06735 0.76 +0.2
1,269,957 - rhlB NOLOHH_06735 0.76 -1.3
1,269,980 + rhlB NOLOHH_06735 0.78 -1.4
1,269,980 + rhlB NOLOHH_06735 0.78 -0.1
1,269,981 - rhlB NOLOHH_06735 0.78 +0.6
1,269,984 + rhlB NOLOHH_06735 0.78 +0.3
1,269,984 + rhlB NOLOHH_06735 0.78 -0.0
1,269,984 + rhlB NOLOHH_06735 0.78 +0.4
1,269,985 - rhlB NOLOHH_06735 0.78 +0.1
1,270,011 + rhlB NOLOHH_06735 0.80 -0.1
1,270,012 - rhlB NOLOHH_06735 0.80 +2.2
1,270,012 - rhlB NOLOHH_06735 0.80 -0.7
1,270,023 - rhlB NOLOHH_06735 0.81 -0.5
1,270,061 + rhlB NOLOHH_06735 0.84 +0.4
1,270,062 - rhlB NOLOHH_06735 0.84 +0.6
1,270,083 + rhlB NOLOHH_06735 0.86 +0.4
1,270,084 - rhlB NOLOHH_06735 0.86 -0.9
1,270,084 - rhlB NOLOHH_06735 0.86 -0.9
1,270,103 + rhlB NOLOHH_06735 0.88 -2.4
1,270,113 + rhlB NOLOHH_06735 0.88 +0.4
1,270,113 + rhlB NOLOHH_06735 0.88 -0.5
1,270,113 + rhlB NOLOHH_06735 0.88 -0.1
1,270,113 + rhlB NOLOHH_06735 0.88 -0.7
1,270,113 + rhlB NOLOHH_06735 0.88 +0.3
1,270,113 + rhlB NOLOHH_06735 0.88 -1.0
1,270,113 + rhlB NOLOHH_06735 0.88 -0.4
1,270,113 + rhlB NOLOHH_06735 0.88 -1.2
1,270,113 + rhlB NOLOHH_06735 0.88 -0.4
1,270,113 + rhlB NOLOHH_06735 0.88 -1.0
1,270,113 + rhlB NOLOHH_06735 0.88 +0.7
1,270,113 + rhlB NOLOHH_06735 0.88 +0.6
1,270,113 + rhlB NOLOHH_06735 0.88 -1.0
1,270,113 + rhlB NOLOHH_06735 0.88 +0.2
1,270,113 + rhlB NOLOHH_06735 0.88 -0.9
1,270,113 + rhlB NOLOHH_06735 0.88 +0.4
1,270,113 + rhlB NOLOHH_06735 0.88 -0.2
1,270,113 + rhlB NOLOHH_06735 0.88 -1.5
1,270,113 + rhlB NOLOHH_06735 0.88 -0.1
1,270,113 + rhlB NOLOHH_06735 0.88 -1.2
1,270,113 + rhlB NOLOHH_06735 0.88 +0.2
1,270,113 + rhlB NOLOHH_06735 0.88 +0.1
1,270,113 + rhlB NOLOHH_06735 0.88 -1.1
1,270,113 + rhlB NOLOHH_06735 0.88 +0.3
1,270,113 + rhlB NOLOHH_06735 0.88 +0.2
1,270,113 + rhlB NOLOHH_06735 0.88 +0.4
1,270,113 + rhlB NOLOHH_06735 0.88 +0.9
1,270,114 - rhlB NOLOHH_06735 0.88 +0.4
1,270,114 - rhlB NOLOHH_06735 0.88 +0.1
1,270,114 - rhlB NOLOHH_06735 0.88 +0.6
1,270,114 - rhlB NOLOHH_06735 0.88 -0.9
1,270,114 - rhlB NOLOHH_06735 0.88 +0.1
1,270,114 - rhlB NOLOHH_06735 0.88 -0.9
1,270,114 - rhlB NOLOHH_06735 0.88 +0.6
1,270,114 - rhlB NOLOHH_06735 0.88 -0.9
1,270,114 - rhlB NOLOHH_06735 0.88 +0.2
1,270,114 - rhlB NOLOHH_06735 0.88 -0.7
1,270,114 - rhlB NOLOHH_06735 0.88 -1.7
1,270,114 - rhlB NOLOHH_06735 0.88 -0.2
1,270,114 - rhlB NOLOHH_06735 0.88 +2.2
1,270,114 - rhlB NOLOHH_06735 0.88 +0.1
1,270,114 - rhlB NOLOHH_06735 0.88 +0.3
1,270,114 - rhlB NOLOHH_06735 0.88 +0.2
1,270,114 - rhlB NOLOHH_06735 0.88 +1.6
1,270,143 + -0.8
1,270,144 - +0.1
1,270,202 + +0.8
1,270,202 + +0.6
1,270,202 + +0.6
1,270,258 - +1.4
1,270,261 + -0.1
1,270,261 + +1.3
1,270,261 + +0.6
1,270,262 - +0.2
1,270,272 - -0.7
1,270,292 + -0.0
1,270,328 - +0.6
1,270,328 - +0.8
1,270,328 - -1.1
1,270,328 - -0.0
1,270,328 - -0.6
1,270,332 + -0.7
1,270,332 + -0.4
1,270,332 + +0.1
1,270,332 + +0.3
1,270,332 + -0.4
1,270,332 + +1.3
1,270,332 + -1.0
1,270,333 - +0.2
1,270,333 - +0.6
1,270,333 - -0.5
1,270,333 - +0.2
1,270,333 - -0.1
1,270,335 + +0.7
1,270,335 + -1.0
1,270,335 + -0.6
1,270,335 + -0.1
1,270,336 - +1.8
1,270,336 - -0.6
1,270,336 - +0.3
1,270,392 + -0.3
1,270,393 - -0.3
1,270,393 - +0.6
1,270,440 + -0.3
1,270,441 - -0.6
1,270,450 - +0.4
1,270,551 + gppA NOLOHH_06740 0.11 -1.4
1,270,611 + gppA NOLOHH_06740 0.15 +0.1
1,270,652 + gppA NOLOHH_06740 0.17 -0.6
1,270,653 - gppA NOLOHH_06740 0.18 +1.5
1,270,653 - gppA NOLOHH_06740 0.18 -0.1
1,270,653 - gppA NOLOHH_06740 0.18 -0.0
1,270,681 - gppA NOLOHH_06740 0.19 +0.0
1,270,754 - gppA NOLOHH_06740 0.24 -1.1
1,270,808 + gppA NOLOHH_06740 0.28 -0.2
1,270,809 - gppA NOLOHH_06740 0.28 -0.0
1,270,903 + gppA NOLOHH_06740 0.34 -0.1
1,270,970 + gppA NOLOHH_06740 0.39 -0.3
1,270,970 + gppA NOLOHH_06740 0.39 -2.4
1,270,971 - gppA NOLOHH_06740 0.39 -0.4
1,270,992 - gppA NOLOHH_06740 0.40 -0.7
1,271,241 + gppA NOLOHH_06740 0.57 +0.8
1,271,241 + gppA NOLOHH_06740 0.57 +0.8
1,271,241 + gppA NOLOHH_06740 0.57 -2.0
1,271,241 + gppA NOLOHH_06740 0.57 -1.0
1,271,241 + gppA NOLOHH_06740 0.57 -0.8
1,271,241 + gppA NOLOHH_06740 0.57 +1.6
1,271,241 + gppA NOLOHH_06740 0.57 -1.0
1,271,241 + gppA NOLOHH_06740 0.57 -1.2
1,271,241 + gppA NOLOHH_06740 0.57 +0.6
1,271,242 - gppA NOLOHH_06740 0.57 +0.3
1,271,242 - gppA NOLOHH_06740 0.57 -0.0
1,271,242 - gppA NOLOHH_06740 0.57 -0.3
1,271,242 - gppA NOLOHH_06740 0.57 +2.6
1,271,242 - gppA NOLOHH_06740 0.57 +0.3
1,271,242 - gppA NOLOHH_06740 0.57 +0.6
1,271,281 + gppA NOLOHH_06740 0.60 +0.2
1,271,282 - gppA NOLOHH_06740 0.60 -0.7
1,271,335 - gppA NOLOHH_06740 0.63 +0.2
1,271,337 + gppA NOLOHH_06740 0.64 -0.9
1,271,352 + gppA NOLOHH_06740 0.65 +0.9
1,271,353 - gppA NOLOHH_06740 0.65 +0.6
1,271,528 - gppA NOLOHH_06740 0.76 -1.0
1,271,538 + gppA NOLOHH_06740 0.77 -0.2
1,271,608 - gppA NOLOHH_06740 0.82 -0.7
1,271,608 - gppA NOLOHH_06740 0.82 -0.6
1,271,744 + -0.4
1,271,752 - -0.2
1,271,820 + +0.8
1,271,848 + +0.3
1,271,848 + +0.4
1,271,848 + -0.0
1,271,848 + -0.8
1,271,848 + +0.6
1,271,848 + +0.2
1,271,848 + -0.6
1,271,848 + -2.4
1,271,848 + +1.3
1,271,848 + +0.7
1,271,848 + -0.0
1,271,848 + -1.0
1,271,848 + -1.0
1,271,848 + -0.2
1,271,849 - -0.3
1,271,849 - -0.9
1,271,849 - -0.0
1,271,849 - -0.3
1,271,875 + +0.1
1,271,882 + -1.2
1,271,883 - +0.7
1,271,883 - -0.0
1,271,883 - -0.6
1,271,925 + -0.0
1,271,925 + -0.5
1,271,925 + +1.6
1,271,926 - +0.4
1,271,926 - -0.8
1,272,157 - rep NOLOHH_06745 0.12 +0.6
1,272,496 - rep NOLOHH_06745 0.28 +0.6

Or see this region's nucleotide sequence