Strain Fitness in Escherichia coli ECOR27 around NOLOHH_06310

Experiment: Bas67

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas67
1,187,945	+	srkA	NOLOHH_06305	0.16	-1.3
1,187,946	-	srkA	NOLOHH_06305	0.16	+0.5
1,187,949	-	srkA	NOLOHH_06305	0.16	+0.2
1,187,949	-	srkA	NOLOHH_06305	0.16	-0.2
1,188,020	+	srkA	NOLOHH_06305	0.24	-1.0
1,188,021	-	srkA	NOLOHH_06305	0.24	+2.0
1,188,021	-	srkA	NOLOHH_06305	0.24	-0.0
1,188,030	+	srkA	NOLOHH_06305	0.25	+0.9
1,188,096	+	srkA	NOLOHH_06305	0.31	-2.9
1,188,108	+	srkA	NOLOHH_06305	0.32	-0.3
1,188,108	+	srkA	NOLOHH_06305	0.32	-1.0
1,188,109	-	srkA	NOLOHH_06305	0.33	-0.6
1,188,157	-	srkA	NOLOHH_06305	0.37	+1.0
1,188,157	-	srkA	NOLOHH_06305	0.37	-0.0
1,188,278	-	srkA	NOLOHH_06305	0.50	+0.1
1,188,278	-	srkA	NOLOHH_06305	0.50	+0.5
1,188,285	+	srkA	NOLOHH_06305	0.50	-0.0
1,188,382	-	srkA	NOLOHH_06305	0.60	+0.3
1,188,393	-	srkA	NOLOHH_06305	0.61	+0.1
1,188,421	-	srkA	NOLOHH_06305	0.64	+0.4
1,188,424	-	srkA	NOLOHH_06305	0.64	-0.2
1,188,651	-	srkA	NOLOHH_06305	0.87	-1.0
1,188,665	+	srkA	NOLOHH_06305	0.89	+2.1
1,188,666	-	srkA	NOLOHH_06305	0.89	+0.2
1,188,673	-	srkA	NOLOHH_06305	0.90	+0.2
1,188,681	+				+0.2
1,188,715	+				-0.3
1,188,715	+				+0.4
1,188,715	+				+1.5
1,188,716	-				+1.2
1,188,742	+				-1.0
1,188,742	+				-0.8
1,188,742	+				+2.1
1,188,742	+				+0.4
1,188,743	-				-1.0
1,188,743	-				+0.5
1,188,757	-				-2.5
1,188,795	-				+0.2
1,188,795	-				-0.0
1,188,853	-				+1.4
1,188,859	+				+0.3
1,188,967	-	yihD	NOLOHH_06310	0.43	-0.1
1,188,967	-	yihD	NOLOHH_06310	0.43	-0.3
1,189,121	-				-0.0
1,189,123	+				-0.3
1,189,123	+				+0.0
1,189,123	+				+0.1
1,189,123	+				-0.2
1,189,124	-				+1.1
1,189,133	+				+0.0
1,189,134	-				+0.0
1,189,134	-				+0.7
1,189,153	+				+0.5
1,189,173	+				-1.2
1,189,173	+				+0.7
1,189,257	+	mobA	NOLOHH_06315	0.11	+0.7
1,189,257	+	mobA	NOLOHH_06315	0.11	-0.6
1,189,258	-	mobA	NOLOHH_06315	0.12	+0.4
1,189,278	+	mobA	NOLOHH_06315	0.15	-0.9
1,189,278	+	mobA	NOLOHH_06315	0.15	+0.5
1,189,493	-	mobA	NOLOHH_06315	0.52	+1.1
1,189,499	+	mobA	NOLOHH_06315	0.53	-1.5
1,189,499	+	mobA	NOLOHH_06315	0.53	-1.8
1,189,499	+	mobA	NOLOHH_06315	0.53	-0.5
1,189,499	+	mobA	NOLOHH_06315	0.53	-0.8
1,189,500	-	mobA	NOLOHH_06315	0.53	+0.5
1,189,501	+	mobA	NOLOHH_06315	0.53	-0.2
1,189,501	+	mobA	NOLOHH_06315	0.53	-0.5
1,189,501	+	mobA	NOLOHH_06315	0.53	+0.1
1,189,501	+	mobA	NOLOHH_06315	0.53	+0.0
1,189,502	-	mobA	NOLOHH_06315	0.53	+0.5
1,189,515	+	mobA	NOLOHH_06315	0.56	-0.4
1,189,515	+	mobA	NOLOHH_06315	0.56	+0.5
1,189,591	+	mobA	NOLOHH_06315	0.69	-0.3
1,189,591	+	mobA	NOLOHH_06315	0.69	-0.5
1,189,623	+	mobA	NOLOHH_06315	0.74	-1.0
1,189,634	+	mobA	NOLOHH_06315	0.76	-0.5
1,189,634	+	mobA	NOLOHH_06315	0.76	-1.6
1,189,669	+	mobA	NOLOHH_06315	0.82	+0.5
1,189,669	+	mobA	NOLOHH_06315	0.82	+0.5
1,189,669	+	mobA	NOLOHH_06315	0.82	-0.5
1,189,670	-	mobA	NOLOHH_06315	0.82	+0.4
1,189,711	+	mobA	NOLOHH_06315	0.89	-0.2
1,189,712	-	mobA	NOLOHH_06315	0.89	+0.5
1,189,712	-	mobA	NOLOHH_06315	0.89	+1.4
1,189,723	+				+0.9
1,189,723	+				-0.3
1,189,723	+				-1.7
1,189,818	+	mobB	NOLOHH_06320	0.12	-0.2
1,189,878	+	mobB	NOLOHH_06320	0.23	-0.8
1,189,923	+	mobB	NOLOHH_06320	0.32	-0.1
1,189,923	+	mobB	NOLOHH_06320	0.32	+0.5
1,189,923	+	mobB	NOLOHH_06320	0.32	+1.3
1,189,923	+	mobB	NOLOHH_06320	0.32	-1.0
1,189,923	+	mobB	NOLOHH_06320	0.32	+1.5
1,189,923	+	mobB	NOLOHH_06320	0.32	-0.3
1,189,924	-	mobB	NOLOHH_06320	0.32	+2.1
1,189,927	+	mobB	NOLOHH_06320	0.32	+0.5
1,189,927	+	mobB	NOLOHH_06320	0.32	+0.4
1,189,927	+	mobB	NOLOHH_06320	0.32	-0.8
1,189,927	+	mobB	NOLOHH_06320	0.32	-0.4
1,189,928	-	mobB	NOLOHH_06320	0.33	+1.5
1,189,928	-	mobB	NOLOHH_06320	0.33	-0.5
1,190,085	+	mobB	NOLOHH_06320	0.62	-1.2
1,190,085	+	mobB	NOLOHH_06320	0.62	-0.2
1,190,085	+	mobB	NOLOHH_06320	0.62	-0.8
1,190,086	-	mobB	NOLOHH_06320	0.62	+0.9