Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dnaB and qorA are separated by 82 nucleotides qorA and pspG are separated by 165 nucleotides pspG and dusA are separated by 133 nucleotides
NOLOHH_05180: dnaB - replicative DNA helicase, at 952,847 to 954,262
dnaB
NOLOHH_05185: qorA - Quinone oxidoreductase 1, at 954,345 to 955,328
qorA
NOLOHH_05190: pspG - envelope stress response protein PspG, at 955,494 to 955,736
pspG
NOLOHH_05195: dusA - tRNA dihydrouridine(20/20a) synthase DusA, at 955,870 to 956,907
dusA
Position (kb) 954
955
956 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 954.304 kb on - strand at 954.304 kb on - strand at 954.309 kb on - strand at 954.309 kb on - strand at 954.329 kb on - strand at 954.329 kb on - strand at 954.388 kb on + strand at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.480 kb on + strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.481 kb on - strand, within qorA at 954.526 kb on + strand, within qorA at 954.527 kb on - strand, within qorA at 954.527 kb on - strand, within qorA at 954.530 kb on + strand, within qorA at 954.571 kb on + strand, within qorA at 954.571 kb on + strand, within qorA at 954.571 kb on + strand, within qorA at 954.572 kb on - strand, within qorA at 954.572 kb on - strand, within qorA at 954.572 kb on - strand, within qorA at 954.578 kb on + strand, within qorA at 954.579 kb on - strand, within qorA at 954.581 kb on + strand, within qorA at 954.582 kb on - strand, within qorA at 954.598 kb on + strand, within qorA at 954.603 kb on + strand, within qorA at 954.604 kb on - strand, within qorA at 954.604 kb on - strand, within qorA at 954.628 kb on - strand, within qorA at 954.642 kb on - strand, within qorA at 954.647 kb on + strand, within qorA at 954.647 kb on + strand, within qorA at 954.648 kb on - strand, within qorA at 954.648 kb on - strand, within qorA at 954.732 kb on + strand, within qorA at 954.732 kb on + strand, within qorA at 954.751 kb on - strand, within qorA at 954.808 kb on + strand, within qorA at 954.809 kb on - strand, within qorA at 954.859 kb on + strand, within qorA at 954.890 kb on - strand, within qorA at 954.912 kb on - strand, within qorA at 954.914 kb on + strand, within qorA at 954.914 kb on + strand, within qorA at 954.914 kb on + strand, within qorA at 954.915 kb on - strand, within qorA at 954.915 kb on - strand, within qorA at 954.915 kb on - strand, within qorA at 954.915 kb on - strand, within qorA at 954.918 kb on + strand, within qorA at 954.984 kb on + strand, within qorA at 954.984 kb on + strand, within qorA at 955.045 kb on + strand, within qorA at 955.045 kb on + strand, within qorA at 955.045 kb on + strand, within qorA at 955.122 kb on + strand, within qorA at 955.122 kb on + strand, within qorA at 955.122 kb on + strand, within qorA at 955.122 kb on + strand, within qorA at 955.122 kb on + strand, within qorA at 955.123 kb on - strand, within qorA at 955.149 kb on + strand, within qorA at 955.149 kb on + strand, within qorA at 955.149 kb on + strand, within qorA at 955.149 kb on + strand, within qorA at 955.149 kb on + strand, within qorA at 955.150 kb on - strand, within qorA at 955.150 kb on - strand, within qorA at 955.150 kb on - strand, within qorA at 955.150 kb on - strand, within qorA at 955.150 kb on - strand, within qorA at 955.150 kb on - strand, within qorA at 955.151 kb on + strand, within qorA at 955.151 kb on + strand, within qorA at 955.151 kb on + strand, within qorA at 955.151 kb on + strand, within qorA at 955.151 kb on + strand, within qorA at 955.220 kb on + strand, within qorA at 955.369 kb on - strand at 955.379 kb on + strand at 955.379 kb on + strand at 955.379 kb on + strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.380 kb on - strand at 955.383 kb on + strand at 955.384 kb on - strand at 955.384 kb on - strand at 955.384 kb on - strand at 955.444 kb on + strand at 955.454 kb on + strand at 955.469 kb on - strand at 955.469 kb on - strand at 955.469 kb on - strand at 955.469 kb on - strand at 955.469 kb on - strand at 955.553 kb on + strand, within pspG at 955.581 kb on + strand, within pspG at 955.581 kb on + strand, within pspG at 955.581 kb on + strand, within pspG at 955.601 kb on + strand, within pspG at 955.602 kb on - strand, within pspG at 955.602 kb on - strand, within pspG at 955.602 kb on - strand, within pspG at 955.634 kb on + strand, within pspG at 955.634 kb on + strand, within pspG at 955.634 kb on + strand, within pspG at 955.635 kb on - strand, within pspG at 955.635 kb on - strand, within pspG at 955.725 kb on + strand at 955.725 kb on + strand at 955.853 kb on + strand at 955.914 kb on + strand at 955.915 kb on - strand at 955.948 kb on + strand at 955.948 kb on + strand at 955.980 kb on + strand, within dusA at 956.001 kb on + strand, within dusA at 956.001 kb on + strand, within dusA at 956.001 kb on + strand, within dusA at 956.001 kb on + strand, within dusA at 956.002 kb on - strand, within dusA at 956.024 kb on + strand, within dusA at 956.024 kb on + strand, within dusA at 956.025 kb on - strand, within dusA at 956.025 kb on - strand, within dusA at 956.055 kb on - strand, within dusA at 956.055 kb on - strand, within dusA at 956.061 kb on - strand, within dusA at 956.061 kb on - strand, within dusA at 956.184 kb on + strand, within dusA at 956.184 kb on + strand, within dusA at 956.185 kb on - strand, within dusA at 956.185 kb on - strand, within dusA at 956.185 kb on - strand, within dusA at 956.185 kb on - strand, within dusA at 956.223 kb on + strand, within dusA at 956.274 kb on - strand, within dusA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 954,304 - -0.3 954,304 - +2.8 954,309 - -1.5 954,309 - +2.5 954,329 - -0.5 954,329 - +1.1 954,388 + -0.5 954,480 + qorA NOLOHH_05185 0.14 -0.9 954,480 + qorA NOLOHH_05185 0.14 -0.7 954,480 + qorA NOLOHH_05185 0.14 +0.2 954,480 + qorA NOLOHH_05185 0.14 -0.6 954,480 + qorA NOLOHH_05185 0.14 -1.6 954,480 + qorA NOLOHH_05185 0.14 +0.3 954,480 + qorA NOLOHH_05185 0.14 +0.4 954,480 + qorA NOLOHH_05185 0.14 -1.5 954,480 + qorA NOLOHH_05185 0.14 -0.1 954,480 + qorA NOLOHH_05185 0.14 -1.3 954,480 + qorA NOLOHH_05185 0.14 -0.8 954,480 + qorA NOLOHH_05185 0.14 +0.5 954,480 + qorA NOLOHH_05185 0.14 -1.2 954,480 + qorA NOLOHH_05185 0.14 +0.0 954,480 + qorA NOLOHH_05185 0.14 -0.3 954,481 - qorA NOLOHH_05185 0.14 -0.6 954,481 - qorA NOLOHH_05185 0.14 +0.2 954,481 - qorA NOLOHH_05185 0.14 -0.8 954,481 - qorA NOLOHH_05185 0.14 +0.3 954,481 - qorA NOLOHH_05185 0.14 -0.4 954,481 - qorA NOLOHH_05185 0.14 -0.0 954,481 - qorA NOLOHH_05185 0.14 +0.4 954,481 - qorA NOLOHH_05185 0.14 -0.2 954,481 - qorA NOLOHH_05185 0.14 -0.5 954,481 - qorA NOLOHH_05185 0.14 +0.1 954,481 - qorA NOLOHH_05185 0.14 +0.1 954,481 - qorA NOLOHH_05185 0.14 -0.1 954,481 - qorA NOLOHH_05185 0.14 -0.3 954,481 - qorA NOLOHH_05185 0.14 -0.4 954,526 + qorA NOLOHH_05185 0.18 -1.3 954,527 - qorA NOLOHH_05185 0.18 +0.8 954,527 - qorA NOLOHH_05185 0.18 +0.7 954,530 + qorA NOLOHH_05185 0.19 -0.5 954,571 + qorA NOLOHH_05185 0.23 -0.3 954,571 + qorA NOLOHH_05185 0.23 -0.2 954,571 + qorA NOLOHH_05185 0.23 +0.5 954,572 - qorA NOLOHH_05185 0.23 -0.9 954,572 - qorA NOLOHH_05185 0.23 +0.5 954,572 - qorA NOLOHH_05185 0.23 +0.4 954,578 + qorA NOLOHH_05185 0.24 +0.3 954,579 - qorA NOLOHH_05185 0.24 +0.1 954,581 + qorA NOLOHH_05185 0.24 +1.0 954,582 - qorA NOLOHH_05185 0.24 -0.1 954,598 + qorA NOLOHH_05185 0.26 +0.1 954,603 + qorA NOLOHH_05185 0.26 +1.5 954,604 - qorA NOLOHH_05185 0.26 -0.2 954,604 - qorA NOLOHH_05185 0.26 -1.0 954,628 - qorA NOLOHH_05185 0.29 +0.2 954,642 - qorA NOLOHH_05185 0.30 +1.5 954,647 + qorA NOLOHH_05185 0.31 +0.2 954,647 + qorA NOLOHH_05185 0.31 +0.5 954,648 - qorA NOLOHH_05185 0.31 -0.5 954,648 - qorA NOLOHH_05185 0.31 -0.0 954,732 + qorA NOLOHH_05185 0.39 +0.1 954,732 + qorA NOLOHH_05185 0.39 +0.5 954,751 - qorA NOLOHH_05185 0.41 -0.1 954,808 + qorA NOLOHH_05185 0.47 +0.5 954,809 - qorA NOLOHH_05185 0.47 -0.5 954,859 + qorA NOLOHH_05185 0.52 -0.4 954,890 - qorA NOLOHH_05185 0.55 -0.7 954,912 - qorA NOLOHH_05185 0.58 +0.5 954,914 + qorA NOLOHH_05185 0.58 +0.8 954,914 + qorA NOLOHH_05185 0.58 -0.2 954,914 + qorA NOLOHH_05185 0.58 -0.4 954,915 - qorA NOLOHH_05185 0.58 +0.1 954,915 - qorA NOLOHH_05185 0.58 +3.5 954,915 - qorA NOLOHH_05185 0.58 +0.6 954,915 - qorA NOLOHH_05185 0.58 -1.1 954,918 + qorA NOLOHH_05185 0.58 -0.4 954,984 + qorA NOLOHH_05185 0.65 -0.4 954,984 + qorA NOLOHH_05185 0.65 +1.5 955,045 + qorA NOLOHH_05185 0.71 -1.3 955,045 + qorA NOLOHH_05185 0.71 +0.7 955,045 + qorA NOLOHH_05185 0.71 -0.3 955,122 + qorA NOLOHH_05185 0.79 -0.1 955,122 + qorA NOLOHH_05185 0.79 -0.7 955,122 + qorA NOLOHH_05185 0.79 +0.5 955,122 + qorA NOLOHH_05185 0.79 +0.1 955,122 + qorA NOLOHH_05185 0.79 -0.5 955,123 - qorA NOLOHH_05185 0.79 -1.8 955,149 + qorA NOLOHH_05185 0.82 -0.8 955,149 + qorA NOLOHH_05185 0.82 +2.3 955,149 + qorA NOLOHH_05185 0.82 -1.2 955,149 + qorA NOLOHH_05185 0.82 +0.2 955,149 + qorA NOLOHH_05185 0.82 -0.3 955,150 - qorA NOLOHH_05185 0.82 -0.1 955,150 - qorA NOLOHH_05185 0.82 +0.6 955,150 - qorA NOLOHH_05185 0.82 -0.1 955,150 - qorA NOLOHH_05185 0.82 +0.5 955,150 - qorA NOLOHH_05185 0.82 -0.2 955,150 - qorA NOLOHH_05185 0.82 +0.1 955,151 + qorA NOLOHH_05185 0.82 +0.1 955,151 + qorA NOLOHH_05185 0.82 +1.1 955,151 + qorA NOLOHH_05185 0.82 +0.5 955,151 + qorA NOLOHH_05185 0.82 +0.3 955,151 + qorA NOLOHH_05185 0.82 +0.2 955,220 + qorA NOLOHH_05185 0.89 +1.9 955,369 - -0.7 955,379 + -1.3 955,379 + +0.3 955,379 + +0.1 955,380 - +0.9 955,380 - +0.3 955,380 - +1.2 955,380 - +0.3 955,380 - -0.1 955,380 - +1.1 955,380 - -1.8 955,380 - +0.1 955,380 - +0.9 955,383 + -1.1 955,384 - -0.7 955,384 - -1.0 955,384 - +0.1 955,444 + +0.3 955,454 + +1.1 955,469 - +0.0 955,469 - +0.2 955,469 - +0.1 955,469 - -0.6 955,469 - +0.7 955,553 + pspG NOLOHH_05190 0.24 +0.1 955,581 + pspG NOLOHH_05190 0.36 -0.9 955,581 + pspG NOLOHH_05190 0.36 -1.1 955,581 + pspG NOLOHH_05190 0.36 -1.2 955,601 + pspG NOLOHH_05190 0.44 +0.5 955,602 - pspG NOLOHH_05190 0.44 +0.1 955,602 - pspG NOLOHH_05190 0.44 -2.8 955,602 - pspG NOLOHH_05190 0.44 +0.3 955,634 + pspG NOLOHH_05190 0.58 -0.4 955,634 + pspG NOLOHH_05190 0.58 -0.4 955,634 + pspG NOLOHH_05190 0.58 +0.8 955,635 - pspG NOLOHH_05190 0.58 +0.3 955,635 - pspG NOLOHH_05190 0.58 -1.0 955,725 + -0.6 955,725 + -1.3 955,853 + -0.5 955,914 + -1.0 955,915 - +0.8 955,948 + -0.5 955,948 + -0.7 955,980 + dusA NOLOHH_05195 0.11 -0.5 956,001 + dusA NOLOHH_05195 0.13 +0.9 956,001 + dusA NOLOHH_05195 0.13 -0.3 956,001 + dusA NOLOHH_05195 0.13 +0.2 956,001 + dusA NOLOHH_05195 0.13 -0.2 956,002 - dusA NOLOHH_05195 0.13 +1.0 956,024 + dusA NOLOHH_05195 0.15 +0.5 956,024 + dusA NOLOHH_05195 0.15 +0.6 956,025 - dusA NOLOHH_05195 0.15 -2.1 956,025 - dusA NOLOHH_05195 0.15 +0.7 956,055 - dusA NOLOHH_05195 0.18 +2.5 956,055 - dusA NOLOHH_05195 0.18 +1.8 956,061 - dusA NOLOHH_05195 0.18 +0.2 956,061 - dusA NOLOHH_05195 0.18 -0.3 956,184 + dusA NOLOHH_05195 0.30 -0.5 956,184 + dusA NOLOHH_05195 0.30 +0.7 956,185 - dusA NOLOHH_05195 0.30 -0.9 956,185 - dusA NOLOHH_05195 0.30 -1.2 956,185 - dusA NOLOHH_05195 0.30 -0.7 956,185 - dusA NOLOHH_05195 0.30 +1.1 956,223 + dusA NOLOHH_05195 0.34 -1.1 956,274 - dusA NOLOHH_05195 0.39 +0.3
Or see this region's nucleotide sequence