Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt epmB and NOLOHH_04660 are separated by 389 nucleotides NOLOHH_04660 and NOLOHH_04665 are separated by 248 nucleotides
NOLOHH_04655: epmB - EF-P beta-lysylation protein EpmB, at 842,690 to 843,718
epmB
NOLOHH_04660: NOLOHH_04660 - Protein, at 844,108 to 844,977
_04660
NOLOHH_04665: NOLOHH_04665 - IS110-like element IS621 family transposase, at 845,226 to 846,206
_04665
Position (kb) 844
845 Strain fitness (log2 ratio) -1
0
1
2 at 843.137 kb on + strand, within epmB at 843.137 kb on + strand, within epmB at 843.717 kb on - strand at 843.717 kb on - strand at 843.758 kb on - strand at 843.763 kb on + strand at 843.863 kb on + strand at 843.864 kb on - strand at 843.864 kb on - strand at 843.864 kb on - strand at 843.930 kb on + strand at 843.931 kb on - strand at 843.951 kb on + strand at 843.951 kb on + strand at 843.954 kb on - strand at 844.013 kb on + strand at 844.014 kb on - strand at 844.014 kb on - strand at 844.105 kb on + strand at 844.185 kb on + strand at 844.218 kb on + strand, within NOLOHH_04660 at 844.281 kb on + strand, within NOLOHH_04660 at 844.542 kb on + strand, within NOLOHH_04660 at 844.571 kb on + strand, within NOLOHH_04660 at 844.576 kb on - strand, within NOLOHH_04660 at 844.576 kb on - strand, within NOLOHH_04660 at 844.578 kb on + strand, within NOLOHH_04660 at 844.579 kb on - strand, within NOLOHH_04660 at 844.606 kb on + strand, within NOLOHH_04660 at 844.788 kb on - strand, within NOLOHH_04660 at 844.861 kb on + strand, within NOLOHH_04660 at 844.861 kb on + strand, within NOLOHH_04660 at 844.862 kb on - strand, within NOLOHH_04660 at 844.934 kb on + strand at 844.934 kb on + strand at 844.934 kb on + strand at 844.935 kb on - strand at 844.935 kb on - strand at 844.935 kb on - strand at 844.935 kb on - strand at 844.935 kb on - strand at 844.935 kb on - strand at 844.975 kb on + strand at 844.975 kb on + strand at 844.976 kb on - strand at 844.991 kb on - strand at 845.119 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 843,137 + epmB NOLOHH_04655 0.43 -1.1 843,137 + epmB NOLOHH_04655 0.43 -0.5 843,717 - +1.8 843,717 - +0.4 843,758 - -0.3 843,763 + +0.1 843,863 + -0.5 843,864 - -1.1 843,864 - -0.3 843,864 - -0.1 843,930 + -0.5 843,931 - -1.5 843,951 + -0.2 843,951 + +0.5 843,954 - -0.5 844,013 + +0.5 844,014 - -0.8 844,014 - -0.6 844,105 + +1.0 844,185 + -0.6 844,218 + NOLOHH_04660 0.13 +1.0 844,281 + NOLOHH_04660 0.20 +0.2 844,542 + NOLOHH_04660 0.50 +2.1 844,571 + NOLOHH_04660 0.53 +0.1 844,576 - NOLOHH_04660 0.54 -0.2 844,576 - NOLOHH_04660 0.54 -0.1 844,578 + NOLOHH_04660 0.54 -0.3 844,579 - NOLOHH_04660 0.54 +1.1 844,606 + NOLOHH_04660 0.57 +0.2 844,788 - NOLOHH_04660 0.78 -0.2 844,861 + NOLOHH_04660 0.87 +0.4 844,861 + NOLOHH_04660 0.87 -0.8 844,862 - NOLOHH_04660 0.87 +1.3 844,934 + -0.7 844,934 + +0.0 844,934 + -0.5 844,935 - -0.0 844,935 - -0.5 844,935 - +0.7 844,935 - -1.5 844,935 - +0.1 844,935 - +0.1 844,975 + +0.8 844,975 + -0.6 844,976 - -0.2 844,991 - +1.0 845,119 - +1.1
Or see this region's nucleotide sequence