Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_02830 and lpdA are separated by 70 nucleotides lpdA and aceF are separated by 324 nucleotides
NOLOHH_02830: NOLOHH_02830 - DUF3300 domain-containing protein, at 478,182 to 479,939
_02830
NOLOHH_02835: lpdA - dihydrolipoyl dehydrogenase, at 480,010 to 481,434
lpdA
NOLOHH_02840: aceF - pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase, at 481,759 to 483,651
aceF
Position (kb) 480
481
482 Strain fitness (log2 ratio) -1
0
1
2 at 479.013 kb on - strand, within NOLOHH_02830 at 479.042 kb on + strand, within NOLOHH_02830 at 479.042 kb on + strand, within NOLOHH_02830 at 479.042 kb on + strand, within NOLOHH_02830 at 479.042 kb on + strand, within NOLOHH_02830 at 479.043 kb on - strand, within NOLOHH_02830 at 479.064 kb on + strand, within NOLOHH_02830 at 479.064 kb on + strand, within NOLOHH_02830 at 479.064 kb on + strand, within NOLOHH_02830 at 479.065 kb on - strand, within NOLOHH_02830 at 479.065 kb on - strand, within NOLOHH_02830 at 479.065 kb on - strand, within NOLOHH_02830 at 479.065 kb on - strand, within NOLOHH_02830 at 479.222 kb on + strand, within NOLOHH_02830 at 479.240 kb on + strand, within NOLOHH_02830 at 479.247 kb on - strand, within NOLOHH_02830 at 479.252 kb on + strand, within NOLOHH_02830 at 479.253 kb on - strand, within NOLOHH_02830 at 479.278 kb on - strand, within NOLOHH_02830 at 479.365 kb on + strand, within NOLOHH_02830 at 479.366 kb on - strand, within NOLOHH_02830 at 479.508 kb on + strand, within NOLOHH_02830 at 479.509 kb on - strand, within NOLOHH_02830 at 479.509 kb on - strand, within NOLOHH_02830 at 479.509 kb on - strand, within NOLOHH_02830 at 479.509 kb on - strand, within NOLOHH_02830 at 479.509 kb on - strand, within NOLOHH_02830 at 479.509 kb on - strand, within NOLOHH_02830 at 479.509 kb on - strand, within NOLOHH_02830 at 479.633 kb on + strand, within NOLOHH_02830 at 479.634 kb on - strand, within NOLOHH_02830 at 479.675 kb on + strand, within NOLOHH_02830 at 479.675 kb on + strand, within NOLOHH_02830 at 479.675 kb on + strand, within NOLOHH_02830 at 479.707 kb on + strand, within NOLOHH_02830 at 479.707 kb on + strand, within NOLOHH_02830 at 479.708 kb on - strand, within NOLOHH_02830 at 479.771 kb on + strand at 479.773 kb on + strand at 479.774 kb on - strand at 479.774 kb on - strand at 479.774 kb on - strand at 479.858 kb on + strand at 479.858 kb on + strand at 479.858 kb on + strand at 479.859 kb on - strand at 479.981 kb on - strand at 480.012 kb on - strand at 480.012 kb on - strand at 480.012 kb on - strand at 480.012 kb on - strand at 481.598 kb on - strand at 481.601 kb on - strand at 481.757 kb on - strand at 481.760 kb on + strand at 481.761 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 479,013 - NOLOHH_02830 0.47 +1.0 479,042 + NOLOHH_02830 0.49 -0.6 479,042 + NOLOHH_02830 0.49 +0.4 479,042 + NOLOHH_02830 0.49 -0.1 479,042 + NOLOHH_02830 0.49 +1.4 479,043 - NOLOHH_02830 0.49 -0.3 479,064 + NOLOHH_02830 0.50 -0.8 479,064 + NOLOHH_02830 0.50 +0.7 479,064 + NOLOHH_02830 0.50 -0.6 479,065 - NOLOHH_02830 0.50 -1.0 479,065 - NOLOHH_02830 0.50 +1.4 479,065 - NOLOHH_02830 0.50 +0.0 479,065 - NOLOHH_02830 0.50 -0.6 479,222 + NOLOHH_02830 0.59 -0.9 479,240 + NOLOHH_02830 0.60 -0.5 479,247 - NOLOHH_02830 0.61 +0.4 479,252 + NOLOHH_02830 0.61 +0.7 479,253 - NOLOHH_02830 0.61 -0.0 479,278 - NOLOHH_02830 0.62 +1.4 479,365 + NOLOHH_02830 0.67 +0.4 479,366 - NOLOHH_02830 0.67 +1.4 479,508 + NOLOHH_02830 0.75 -0.5 479,509 - NOLOHH_02830 0.75 -1.6 479,509 - NOLOHH_02830 0.75 +0.7 479,509 - NOLOHH_02830 0.75 +1.0 479,509 - NOLOHH_02830 0.75 -0.3 479,509 - NOLOHH_02830 0.75 +2.4 479,509 - NOLOHH_02830 0.75 -1.2 479,509 - NOLOHH_02830 0.75 +0.8 479,633 + NOLOHH_02830 0.83 -1.3 479,634 - NOLOHH_02830 0.83 -0.6 479,675 + NOLOHH_02830 0.85 -0.2 479,675 + NOLOHH_02830 0.85 -0.8 479,675 + NOLOHH_02830 0.85 +1.6 479,707 + NOLOHH_02830 0.87 -0.0 479,707 + NOLOHH_02830 0.87 -0.9 479,708 - NOLOHH_02830 0.87 +0.6 479,771 + +0.1 479,773 + -0.4 479,774 - +0.4 479,774 - +0.4 479,774 - +0.4 479,858 + -0.6 479,858 + -0.6 479,858 + +0.4 479,859 - +2.0 479,981 - -0.4 480,012 - -0.9 480,012 - +0.4 480,012 - +0.4 480,012 - -0.1 481,598 - -0.6 481,601 - +0.4 481,757 - -0.2 481,760 + -0.6 481,761 - -0.0
Or see this region's nucleotide sequence