Strain Fitness in Escherichia coli ECOR27 around NOLOHH_01990
Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bas67 |
---|---|---|---|---|---|
remove | |||||
303,170 | - | ecpA | NOLOHH_01980 | 0.69 | -0.7 |
303,189 | - | ecpA | NOLOHH_01980 | 0.73 | -0.0 |
303,189 | - | ecpA | NOLOHH_01980 | 0.73 | -0.8 |
303,259 | + | ecpA | NOLOHH_01980 | 0.85 | -0.2 |
303,279 | - | ecpA | NOLOHH_01980 | 0.88 | -1.0 |
303,321 | + | +0.2 | |||
303,321 | + | +0.4 | |||
303,347 | + | -1.0 | |||
303,347 | + | +0.5 | |||
303,347 | + | +0.4 | |||
303,348 | - | -0.3 | |||
303,348 | - | -0.3 | |||
303,406 | + | +0.7 | |||
303,481 | + | ecpB | NOLOHH_01985 | 0.11 | +0.3 |
303,482 | - | ecpB | NOLOHH_01985 | 0.11 | -0.6 |
303,482 | - | ecpB | NOLOHH_01985 | 0.11 | -0.6 |
303,482 | - | ecpB | NOLOHH_01985 | 0.11 | +1.3 |
303,483 | + | ecpB | NOLOHH_01985 | 0.11 | -0.0 |
303,483 | + | ecpB | NOLOHH_01985 | 0.11 | -0.2 |
303,484 | - | ecpB | NOLOHH_01985 | 0.12 | -0.9 |
303,557 | - | ecpB | NOLOHH_01985 | 0.22 | +0.1 |
303,607 | + | ecpB | NOLOHH_01985 | 0.30 | -0.9 |
303,636 | + | ecpB | NOLOHH_01985 | 0.34 | +0.6 |
303,637 | - | ecpB | NOLOHH_01985 | 0.34 | -0.1 |
303,695 | + | ecpB | NOLOHH_01985 | 0.43 | -0.4 |
303,695 | + | ecpB | NOLOHH_01985 | 0.43 | +0.2 |
303,696 | - | ecpB | NOLOHH_01985 | 0.43 | -1.0 |
303,696 | - | ecpB | NOLOHH_01985 | 0.43 | +0.5 |
303,696 | - | ecpB | NOLOHH_01985 | 0.43 | +0.2 |
303,696 | - | ecpB | NOLOHH_01985 | 0.43 | +0.8 |
303,696 | - | ecpB | NOLOHH_01985 | 0.43 | +0.4 |
303,696 | - | ecpB | NOLOHH_01985 | 0.43 | -0.2 |
303,697 | + | ecpB | NOLOHH_01985 | 0.43 | +1.4 |
303,726 | - | ecpB | NOLOHH_01985 | 0.48 | +0.8 |
303,854 | + | ecpB | NOLOHH_01985 | 0.67 | +0.4 |
303,854 | + | ecpB | NOLOHH_01985 | 0.67 | -0.6 |
303,855 | - | ecpB | NOLOHH_01985 | 0.67 | +1.7 |
303,867 | - | ecpB | NOLOHH_01985 | 0.69 | -0.9 |
303,889 | + | ecpB | NOLOHH_01985 | 0.72 | -2.4 |
303,890 | - | ecpB | NOLOHH_01985 | 0.72 | -0.8 |
303,890 | - | ecpB | NOLOHH_01985 | 0.72 | +0.4 |
303,968 | + | ecpB | NOLOHH_01985 | 0.84 | +0.4 |
303,972 | - | ecpB | NOLOHH_01985 | 0.84 | +0.4 |
304,001 | - | ecpB | NOLOHH_01985 | 0.89 | -0.9 |
304,054 | + | -0.1 | |||
304,054 | + | -0.3 | |||
304,054 | + | -0.3 | |||
304,073 | + | +0.2 | |||
304,073 | + | +0.1 | |||
304,073 | + | -0.2 | |||
304,073 | + | -0.4 | |||
304,073 | + | -1.2 | |||
304,077 | + | +1.1 | |||
304,078 | - | +1.0 | |||
304,195 | + | +0.0 | |||
304,196 | - | -0.2 | |||
304,196 | - | -0.4 | |||
304,210 | + | +1.4 | |||
304,211 | - | -0.6 | |||
304,275 | + | +0.6 | |||
304,275 | + | +0.8 | |||
304,275 | + | -1.2 | |||
304,276 | - | -1.2 | |||
304,276 | - | +0.6 | |||
304,276 | - | +0.4 | |||
304,276 | - | +2.4 | |||
304,277 | + | +0.8 | |||
304,278 | - | +0.4 | |||
304,334 | + | -1.1 | |||
304,335 | - | +0.3 | |||
304,357 | + | ecpC | NOLOHH_01990 | 0.10 | +2.4 |
304,358 | - | ecpC | NOLOHH_01990 | 0.10 | +0.4 |
304,372 | + | ecpC | NOLOHH_01990 | 0.11 | -0.3 |
304,373 | - | ecpC | NOLOHH_01990 | 0.11 | -0.2 |
304,558 | + | ecpC | NOLOHH_01990 | 0.18 | +0.7 |
304,562 | - | ecpC | NOLOHH_01990 | 0.18 | -0.5 |
304,562 | - | ecpC | NOLOHH_01990 | 0.18 | +1.1 |
304,571 | + | ecpC | NOLOHH_01990 | 0.19 | +0.1 |
304,572 | - | ecpC | NOLOHH_01990 | 0.19 | -0.3 |
304,624 | - | ecpC | NOLOHH_01990 | 0.21 | +0.1 |
304,624 | - | ecpC | NOLOHH_01990 | 0.21 | +1.0 |
304,624 | - | ecpC | NOLOHH_01990 | 0.21 | +0.5 |
304,625 | + | ecpC | NOLOHH_01990 | 0.21 | +0.2 |
304,625 | + | ecpC | NOLOHH_01990 | 0.21 | -0.8 |
304,625 | + | ecpC | NOLOHH_01990 | 0.21 | +0.8 |
304,625 | + | ecpC | NOLOHH_01990 | 0.21 | -0.0 |
304,626 | - | ecpC | NOLOHH_01990 | 0.21 | -1.3 |
304,638 | + | ecpC | NOLOHH_01990 | 0.21 | -1.6 |
304,680 | + | ecpC | NOLOHH_01990 | 0.23 | +0.0 |
304,701 | - | ecpC | NOLOHH_01990 | 0.24 | -0.6 |
304,777 | + | ecpC | NOLOHH_01990 | 0.27 | -2.9 |
304,779 | + | ecpC | NOLOHH_01990 | 0.27 | -0.3 |
304,780 | - | ecpC | NOLOHH_01990 | 0.27 | +0.4 |
304,780 | - | ecpC | NOLOHH_01990 | 0.27 | -0.3 |
304,780 | - | ecpC | NOLOHH_01990 | 0.27 | +0.0 |
304,781 | + | ecpC | NOLOHH_01990 | 0.27 | +0.4 |
304,782 | - | ecpC | NOLOHH_01990 | 0.27 | +1.4 |
304,791 | + | ecpC | NOLOHH_01990 | 0.27 | +0.4 |
304,791 | + | ecpC | NOLOHH_01990 | 0.27 | +0.6 |
304,791 | + | ecpC | NOLOHH_01990 | 0.27 | -1.6 |
304,791 | + | ecpC | NOLOHH_01990 | 0.27 | -0.6 |
304,792 | - | ecpC | NOLOHH_01990 | 0.27 | -0.0 |
304,893 | + | ecpC | NOLOHH_01990 | 0.31 | +0.4 |
304,990 | + | ecpC | NOLOHH_01990 | 0.35 | -1.2 |
304,990 | + | ecpC | NOLOHH_01990 | 0.35 | -0.9 |
304,990 | + | ecpC | NOLOHH_01990 | 0.35 | -0.2 |
304,991 | - | ecpC | NOLOHH_01990 | 0.35 | +1.6 |
304,991 | - | ecpC | NOLOHH_01990 | 0.35 | -0.7 |
304,991 | - | ecpC | NOLOHH_01990 | 0.35 | -0.0 |
304,991 | - | ecpC | NOLOHH_01990 | 0.35 | -0.9 |
305,018 | - | ecpC | NOLOHH_01990 | 0.36 | -0.5 |
305,082 | + | ecpC | NOLOHH_01990 | 0.39 | +0.6 |
305,082 | + | ecpC | NOLOHH_01990 | 0.39 | -0.9 |
305,083 | - | ecpC | NOLOHH_01990 | 0.39 | +2.0 |
305,147 | + | ecpC | NOLOHH_01990 | 0.41 | -0.2 |
305,303 | + | ecpC | NOLOHH_01990 | 0.48 | +0.4 |
305,304 | - | ecpC | NOLOHH_01990 | 0.48 | +0.6 |
305,304 | - | ecpC | NOLOHH_01990 | 0.48 | +0.9 |
305,309 | + | ecpC | NOLOHH_01990 | 0.48 | -0.2 |
305,309 | + | ecpC | NOLOHH_01990 | 0.48 | -0.5 |
305,310 | - | ecpC | NOLOHH_01990 | 0.48 | +0.4 |
305,310 | - | ecpC | NOLOHH_01990 | 0.48 | +1.2 |
305,408 | + | ecpC | NOLOHH_01990 | 0.52 | -0.3 |
305,408 | + | ecpC | NOLOHH_01990 | 0.52 | +0.2 |
305,408 | + | ecpC | NOLOHH_01990 | 0.52 | +1.0 |
305,409 | - | ecpC | NOLOHH_01990 | 0.52 | +2.0 |
305,409 | - | ecpC | NOLOHH_01990 | 0.52 | -0.9 |
305,409 | - | ecpC | NOLOHH_01990 | 0.52 | -1.4 |
305,409 | - | ecpC | NOLOHH_01990 | 0.52 | +0.2 |
305,409 | - | ecpC | NOLOHH_01990 | 0.52 | +1.1 |
305,475 | - | ecpC | NOLOHH_01990 | 0.54 | +0.2 |
305,610 | + | ecpC | NOLOHH_01990 | 0.60 | -0.0 |
305,611 | - | ecpC | NOLOHH_01990 | 0.60 | -0.1 |
305,611 | - | ecpC | NOLOHH_01990 | 0.60 | -0.3 |
305,640 | + | ecpC | NOLOHH_01990 | 0.61 | -1.0 |
305,641 | - | ecpC | NOLOHH_01990 | 0.61 | -0.6 |
305,641 | - | ecpC | NOLOHH_01990 | 0.61 | -2.2 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | +0.1 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | +0.4 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | -0.5 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | -0.6 |
305,644 | - | ecpC | NOLOHH_01990 | 0.61 | -0.4 |
305,644 | - | ecpC | NOLOHH_01990 | 0.61 | -1.1 |
305,644 | - | ecpC | NOLOHH_01990 | 0.61 | -0.5 |
305,655 | + | ecpC | NOLOHH_01990 | 0.62 | -2.2 |
305,655 | + | ecpC | NOLOHH_01990 | 0.62 | +0.7 |
305,656 | - | ecpC | NOLOHH_01990 | 0.62 | +0.1 |
305,670 | + | ecpC | NOLOHH_01990 | 0.62 | -0.0 |
305,718 | + | ecpC | NOLOHH_01990 | 0.64 | +1.4 |
305,718 | + | ecpC | NOLOHH_01990 | 0.64 | +1.2 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | +2.2 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -0.6 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | +0.7 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -2.2 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -1.0 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -0.7 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -0.2 |
305,755 | - | ecpC | NOLOHH_01990 | 0.65 | +1.4 |
305,755 | - | ecpC | NOLOHH_01990 | 0.65 | +1.4 |
305,755 | - | ecpC | NOLOHH_01990 | 0.65 | -0.0 |
305,757 | - | ecpC | NOLOHH_01990 | 0.66 | +0.4 |
305,757 | - | ecpC | NOLOHH_01990 | 0.66 | +0.4 |
305,776 | + | ecpC | NOLOHH_01990 | 0.66 | +1.2 |
305,823 | + | ecpC | NOLOHH_01990 | 0.68 | +1.4 |
305,823 | + | ecpC | NOLOHH_01990 | 0.68 | +1.4 |
305,949 | + | ecpC | NOLOHH_01990 | 0.73 | +1.1 |
305,949 | + | ecpC | NOLOHH_01990 | 0.73 | -0.1 |
305,950 | - | ecpC | NOLOHH_01990 | 0.73 | +0.3 |
305,950 | - | ecpC | NOLOHH_01990 | 0.73 | +0.2 |
306,012 | + | ecpC | NOLOHH_01990 | 0.76 | -0.0 |
306,107 | - | ecpC | NOLOHH_01990 | 0.79 | +0.9 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +0.4 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +0.1 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.8 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.2 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +0.9 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.8 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +0.7 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.4 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +1.4 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | -0.5 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | +0.4 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | +2.7 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | -0.0 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | +0.7 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | -0.1 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | +1.7 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | -0.3 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | +0.1 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | +0.1 |
306,207 | + | ecpC | NOLOHH_01990 | 0.83 | -0.4 |
306,208 | - | ecpC | NOLOHH_01990 | 0.83 | -1.7 |
306,216 | + | ecpC | NOLOHH_01990 | 0.84 | +0.1 |
306,216 | + | ecpC | NOLOHH_01990 | 0.84 | +1.1 |
306,217 | - | ecpC | NOLOHH_01990 | 0.84 | -1.0 |
306,217 | - | ecpC | NOLOHH_01990 | 0.84 | +0.8 |
306,259 | - | ecpC | NOLOHH_01990 | 0.85 | -0.6 |
306,401 | + | +1.4 | |||
306,468 | + | -0.6 | |||
306,489 | + | +0.6 | |||
306,500 | + | +1.2 | |||
306,501 | - | -1.4 | |||
306,829 | + | ecpD | NOLOHH_01995 | 0.13 | -0.3 |
306,830 | - | ecpD | NOLOHH_01995 | 0.13 | -0.4 |
306,830 | - | ecpD | NOLOHH_01995 | 0.13 | +0.2 |
306,830 | - | ecpD | NOLOHH_01995 | 0.13 | -0.6 |
306,850 | + | ecpD | NOLOHH_01995 | 0.14 | -0.6 |
306,850 | + | ecpD | NOLOHH_01995 | 0.14 | -1.7 |
306,851 | - | ecpD | NOLOHH_01995 | 0.14 | +0.5 |
306,868 | + | ecpD | NOLOHH_01995 | 0.15 | +0.9 |
306,869 | - | ecpD | NOLOHH_01995 | 0.15 | +0.4 |
306,899 | - | ecpD | NOLOHH_01995 | 0.17 | -0.3 |
306,900 | + | ecpD | NOLOHH_01995 | 0.17 | -0.0 |
306,901 | - | ecpD | NOLOHH_01995 | 0.17 | -0.3 |
306,901 | - | ecpD | NOLOHH_01995 | 0.17 | -0.8 |
306,918 | + | ecpD | NOLOHH_01995 | 0.18 | -1.6 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +0.6 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +0.7 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | -0.9 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +1.5 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +0.1 |
306,953 | + | ecpD | NOLOHH_01995 | 0.20 | -1.2 |
306,990 | + | ecpD | NOLOHH_01995 | 0.23 | -0.4 |
306,993 | + | ecpD | NOLOHH_01995 | 0.23 | -0.0 |
306,994 | - | ecpD | NOLOHH_01995 | 0.23 | -1.9 |
306,994 | - | ecpD | NOLOHH_01995 | 0.23 | -0.4 |
307,008 | + | ecpD | NOLOHH_01995 | 0.24 | +1.6 |
307,009 | - | ecpD | NOLOHH_01995 | 0.24 | -1.9 |
307,143 | + | ecpD | NOLOHH_01995 | 0.32 | -0.3 |
307,143 | + | ecpD | NOLOHH_01995 | 0.32 | +0.5 |
307,144 | - | ecpD | NOLOHH_01995 | 0.32 | +1.0 |
307,180 | + | ecpD | NOLOHH_01995 | 0.34 | +0.4 |
307,181 | - | ecpD | NOLOHH_01995 | 0.34 | +0.3 |
307,181 | - | ecpD | NOLOHH_01995 | 0.34 | -0.5 |
307,181 | - | ecpD | NOLOHH_01995 | 0.34 | -0.9 |
307,231 | + | ecpD | NOLOHH_01995 | 0.37 | +2.4 |
307,231 | + | ecpD | NOLOHH_01995 | 0.37 | +0.0 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | +0.8 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | +0.7 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | -1.0 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | -0.2 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | +0.6 |
307,277 | + | ecpD | NOLOHH_01995 | 0.40 | +0.1 |
307,278 | - | ecpD | NOLOHH_01995 | 0.40 | -0.1 |
307,278 | - | ecpD | NOLOHH_01995 | 0.40 | +0.7 |
307,282 | - | ecpD | NOLOHH_01995 | 0.41 | +0.5 |
307,302 | - | ecpD | NOLOHH_01995 | 0.42 | +0.1 |
307,302 | - | ecpD | NOLOHH_01995 | 0.42 | +0.8 |
307,306 | - | ecpD | NOLOHH_01995 | 0.42 | -0.6 |
307,385 | + | ecpD | NOLOHH_01995 | 0.47 | -0.8 |
307,386 | - | ecpD | NOLOHH_01995 | 0.47 | +1.0 |
307,392 | + | ecpD | NOLOHH_01995 | 0.47 | -0.6 |
307,393 | - | ecpD | NOLOHH_01995 | 0.47 | +0.4 |
307,393 | - | ecpD | NOLOHH_01995 | 0.47 | +0.2 |
307,393 | - | ecpD | NOLOHH_01995 | 0.47 | -1.0 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | +0.6 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | -0.6 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | -0.6 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | -0.7 |
307,406 | - | ecpD | NOLOHH_01995 | 0.48 | -0.2 |
307,406 | - | ecpD | NOLOHH_01995 | 0.48 | -0.2 |
307,406 | - | ecpD | NOLOHH_01995 | 0.48 | -0.6 |
307,446 | + | ecpD | NOLOHH_01995 | 0.50 | +0.4 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | -0.1 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | +0.4 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | +0.4 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | -0.6 |
307,448 | + | ecpD | NOLOHH_01995 | 0.51 | -0.7 |
307,448 | + | ecpD | NOLOHH_01995 | 0.51 | -0.2 |
307,449 | - | ecpD | NOLOHH_01995 | 0.51 | -1.4 |
307,449 | - | ecpD | NOLOHH_01995 | 0.51 | -0.0 |
307,495 | + | ecpD | NOLOHH_01995 | 0.53 | +0.1 |
307,496 | - | ecpD | NOLOHH_01995 | 0.54 | +0.7 |
307,555 | + | ecpD | NOLOHH_01995 | 0.57 | +2.7 |
307,555 | + | ecpD | NOLOHH_01995 | 0.57 | +0.1 |
307,555 | + | ecpD | NOLOHH_01995 | 0.57 | -1.6 |
307,556 | - | ecpD | NOLOHH_01995 | 0.57 | +0.4 |
307,556 | - | ecpD | NOLOHH_01995 | 0.57 | -0.3 |
307,558 | + | ecpD | NOLOHH_01995 | 0.57 | +0.4 |
307,558 | + | ecpD | NOLOHH_01995 | 0.57 | -0.8 |
307,559 | - | ecpD | NOLOHH_01995 | 0.57 | -0.3 |
307,559 | - | ecpD | NOLOHH_01995 | 0.57 | -1.2 |
307,559 | - | ecpD | NOLOHH_01995 | 0.57 | +1.4 |
307,594 | + | ecpD | NOLOHH_01995 | 0.59 | +1.2 |
307,595 | - | ecpD | NOLOHH_01995 | 0.60 | -0.7 |
Or see this region's nucleotide sequence