Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt frmA and fghA are separated by 92 nucleotides fghA and yaiL are separated by 225 nucleotides yaiL and mhpT are separated by 101 nucleotides
NOLOHH_01650: frmA - S-(hydroxymethyl)glutathione dehydrogenase, at 223,858 to 224,967
frmA
NOLOHH_01655: fghA - S-formylglutathione hydrolase, at 225,060 to 225,893
fghA
NOLOHH_01665: yaiL - Uncharacterized protein YaiL, at 226,119 to 226,658
yaiL
NOLOHH_01670: mhpT - 3-(3-hydroxy-phenyl)propionate transporter MhpT, at 226,760 to 227,971
mhpT
Position (kb) 225
226 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 224.120 kb on - strand, within frmA at 224.166 kb on + strand, within frmA at 224.236 kb on + strand, within frmA at 224.237 kb on - strand, within frmA at 224.254 kb on + strand, within frmA at 224.254 kb on + strand, within frmA at 224.260 kb on + strand, within frmA at 224.260 kb on + strand, within frmA at 224.261 kb on - strand, within frmA at 224.261 kb on - strand, within frmA at 224.287 kb on + strand, within frmA at 224.288 kb on - strand, within frmA at 224.403 kb on + strand, within frmA at 224.403 kb on + strand, within frmA at 224.403 kb on + strand, within frmA at 224.404 kb on - strand, within frmA at 224.404 kb on - strand, within frmA at 224.404 kb on - strand, within frmA at 224.404 kb on - strand, within frmA at 224.579 kb on - strand, within frmA at 224.592 kb on + strand, within frmA at 224.593 kb on - strand, within frmA at 224.907 kb on + strand at 224.955 kb on - strand at 224.979 kb on + strand at 225.008 kb on + strand at 225.008 kb on + strand at 225.008 kb on + strand at 225.009 kb on - strand at 225.009 kb on - strand at 225.009 kb on - strand at 225.012 kb on - strand at 225.012 kb on - strand at 225.051 kb on + strand at 225.156 kb on + strand, within fghA at 225.156 kb on + strand, within fghA at 225.240 kb on - strand, within fghA at 225.242 kb on + strand, within fghA at 225.242 kb on + strand, within fghA at 225.281 kb on + strand, within fghA at 225.282 kb on - strand, within fghA at 225.403 kb on - strand, within fghA at 225.403 kb on - strand, within fghA at 225.411 kb on + strand, within fghA at 225.411 kb on + strand, within fghA at 225.412 kb on - strand, within fghA at 225.412 kb on - strand, within fghA at 225.412 kb on - strand, within fghA at 225.417 kb on + strand, within fghA at 225.417 kb on + strand, within fghA at 225.417 kb on + strand, within fghA at 225.417 kb on + strand, within fghA at 225.417 kb on + strand, within fghA at 225.418 kb on - strand, within fghA at 225.418 kb on - strand, within fghA at 225.418 kb on - strand, within fghA at 225.418 kb on - strand, within fghA at 225.418 kb on - strand, within fghA at 225.526 kb on + strand, within fghA at 225.531 kb on - strand, within fghA at 225.543 kb on + strand, within fghA at 225.543 kb on + strand, within fghA at 225.544 kb on - strand, within fghA at 225.544 kb on - strand, within fghA at 225.618 kb on + strand, within fghA at 225.619 kb on - strand, within fghA at 225.632 kb on + strand, within fghA at 225.651 kb on + strand, within fghA at 225.652 kb on - strand, within fghA at 225.669 kb on - strand, within fghA at 225.782 kb on + strand, within fghA at 225.783 kb on - strand, within fghA at 225.813 kb on + strand at 225.825 kb on + strand at 225.828 kb on + strand at 225.828 kb on + strand at 225.857 kb on + strand at 225.858 kb on - strand at 225.894 kb on + strand at 225.895 kb on - strand at 225.897 kb on + strand at 225.898 kb on - strand at 225.898 kb on - strand at 225.898 kb on - strand at 225.898 kb on - strand at 226.080 kb on + strand at 226.110 kb on + strand at 226.110 kb on + strand at 226.110 kb on + strand at 226.110 kb on + strand at 226.111 kb on - strand at 226.111 kb on - strand at 226.111 kb on - strand at 226.111 kb on - strand at 226.111 kb on - strand at 226.111 kb on - strand at 226.111 kb on - strand at 226.114 kb on + strand at 226.114 kb on + strand at 226.115 kb on - strand at 226.115 kb on - strand at 226.115 kb on - strand at 226.115 kb on - strand at 226.115 kb on - strand at 226.208 kb on + strand, within yaiL at 226.209 kb on - strand, within yaiL at 226.209 kb on - strand, within yaiL at 226.215 kb on - strand, within yaiL at 226.264 kb on + strand, within yaiL at 226.264 kb on + strand, within yaiL at 226.277 kb on + strand, within yaiL at 226.385 kb on + strand, within yaiL at 226.451 kb on + strand, within yaiL at 226.451 kb on + strand, within yaiL at 226.451 kb on + strand, within yaiL at 226.452 kb on - strand, within yaiL at 226.452 kb on - strand, within yaiL at 226.452 kb on - strand, within yaiL at 226.452 kb on - strand, within yaiL at 226.500 kb on - strand, within yaiL at 226.523 kb on + strand, within yaiL at 226.641 kb on + strand at 226.642 kb on - strand at 226.642 kb on - strand at 226.646 kb on + strand at 226.647 kb on - strand at 226.682 kb on - strand at 226.682 kb on - strand at 226.696 kb on - strand at 226.696 kb on - strand at 226.696 kb on - strand at 226.697 kb on + strand at 226.697 kb on + strand at 226.698 kb on - strand at 226.747 kb on + strand at 226.747 kb on + strand at 226.747 kb on + strand at 226.748 kb on - strand at 226.752 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 224,120 - frmA NOLOHH_01650 0.24 -0.2 224,166 + frmA NOLOHH_01650 0.28 -1.6 224,236 + frmA NOLOHH_01650 0.34 -0.0 224,237 - frmA NOLOHH_01650 0.34 +1.4 224,254 + frmA NOLOHH_01650 0.36 -0.2 224,254 + frmA NOLOHH_01650 0.36 +0.1 224,260 + frmA NOLOHH_01650 0.36 -1.6 224,260 + frmA NOLOHH_01650 0.36 -0.2 224,261 - frmA NOLOHH_01650 0.36 -1.2 224,261 - frmA NOLOHH_01650 0.36 +0.1 224,287 + frmA NOLOHH_01650 0.39 +1.0 224,288 - frmA NOLOHH_01650 0.39 +0.4 224,403 + frmA NOLOHH_01650 0.49 +0.4 224,403 + frmA NOLOHH_01650 0.49 -0.2 224,403 + frmA NOLOHH_01650 0.49 +0.9 224,404 - frmA NOLOHH_01650 0.49 +0.4 224,404 - frmA NOLOHH_01650 0.49 +0.2 224,404 - frmA NOLOHH_01650 0.49 -0.4 224,404 - frmA NOLOHH_01650 0.49 -0.9 224,579 - frmA NOLOHH_01650 0.65 -1.4 224,592 + frmA NOLOHH_01650 0.66 +1.1 224,593 - frmA NOLOHH_01650 0.66 +0.4 224,907 + -1.5 224,955 - +0.4 224,979 + -0.6 225,008 + +0.3 225,008 + -0.6 225,008 + +0.0 225,009 - -0.3 225,009 - +0.4 225,009 - +1.4 225,012 - +1.4 225,012 - +0.1 225,051 + +0.6 225,156 + fghA NOLOHH_01655 0.12 +0.1 225,156 + fghA NOLOHH_01655 0.12 -1.4 225,240 - fghA NOLOHH_01655 0.22 -0.3 225,242 + fghA NOLOHH_01655 0.22 +0.4 225,242 + fghA NOLOHH_01655 0.22 -1.2 225,281 + fghA NOLOHH_01655 0.26 -0.6 225,282 - fghA NOLOHH_01655 0.27 +0.3 225,403 - fghA NOLOHH_01655 0.41 +0.2 225,403 - fghA NOLOHH_01655 0.41 -0.0 225,411 + fghA NOLOHH_01655 0.42 +0.1 225,411 + fghA NOLOHH_01655 0.42 +0.4 225,412 - fghA NOLOHH_01655 0.42 +0.2 225,412 - fghA NOLOHH_01655 0.42 -0.8 225,412 - fghA NOLOHH_01655 0.42 +1.4 225,417 + fghA NOLOHH_01655 0.43 -1.0 225,417 + fghA NOLOHH_01655 0.43 -0.6 225,417 + fghA NOLOHH_01655 0.43 +1.4 225,417 + fghA NOLOHH_01655 0.43 -0.3 225,417 + fghA NOLOHH_01655 0.43 -0.8 225,418 - fghA NOLOHH_01655 0.43 -0.2 225,418 - fghA NOLOHH_01655 0.43 -1.6 225,418 - fghA NOLOHH_01655 0.43 +1.0 225,418 - fghA NOLOHH_01655 0.43 -1.8 225,418 - fghA NOLOHH_01655 0.43 +0.7 225,526 + fghA NOLOHH_01655 0.56 +0.6 225,531 - fghA NOLOHH_01655 0.56 +1.4 225,543 + fghA NOLOHH_01655 0.58 +1.1 225,543 + fghA NOLOHH_01655 0.58 +0.8 225,544 - fghA NOLOHH_01655 0.58 +1.0 225,544 - fghA NOLOHH_01655 0.58 -0.4 225,618 + fghA NOLOHH_01655 0.67 -0.9 225,619 - fghA NOLOHH_01655 0.67 -0.6 225,632 + fghA NOLOHH_01655 0.69 +1.1 225,651 + fghA NOLOHH_01655 0.71 +0.6 225,652 - fghA NOLOHH_01655 0.71 -0.2 225,669 - fghA NOLOHH_01655 0.73 +1.1 225,782 + fghA NOLOHH_01655 0.87 +0.5 225,783 - fghA NOLOHH_01655 0.87 +1.7 225,813 + -0.6 225,825 + -0.3 225,828 + +1.0 225,828 + +0.7 225,857 + +0.0 225,858 - +0.4 225,894 + +1.4 225,895 - +0.4 225,897 + +2.7 225,898 - +1.1 225,898 - -0.6 225,898 - +0.1 225,898 - +0.6 226,080 + +0.7 226,110 + +0.4 226,110 + -0.3 226,110 + -0.6 226,110 + +1.6 226,111 - +0.4 226,111 - +1.2 226,111 - +0.7 226,111 - +0.1 226,111 - -0.9 226,111 - +1.0 226,111 - -0.6 226,114 + -1.6 226,114 + -0.8 226,115 - +0.2 226,115 - +1.0 226,115 - +1.3 226,115 - -2.2 226,115 - -1.4 226,208 + yaiL NOLOHH_01665 0.16 +0.7 226,209 - yaiL NOLOHH_01665 0.17 -0.5 226,209 - yaiL NOLOHH_01665 0.17 -0.2 226,215 - yaiL NOLOHH_01665 0.18 -0.8 226,264 + yaiL NOLOHH_01665 0.27 -1.2 226,264 + yaiL NOLOHH_01665 0.27 +2.0 226,277 + yaiL NOLOHH_01665 0.29 -1.4 226,385 + yaiL NOLOHH_01665 0.49 -0.6 226,451 + yaiL NOLOHH_01665 0.61 +3.0 226,451 + yaiL NOLOHH_01665 0.61 +1.7 226,451 + yaiL NOLOHH_01665 0.61 +0.6 226,452 - yaiL NOLOHH_01665 0.62 -0.3 226,452 - yaiL NOLOHH_01665 0.62 +1.6 226,452 - yaiL NOLOHH_01665 0.62 -0.0 226,452 - yaiL NOLOHH_01665 0.62 -0.2 226,500 - yaiL NOLOHH_01665 0.71 -0.3 226,523 + yaiL NOLOHH_01665 0.75 +0.4 226,641 + -0.2 226,642 - +0.1 226,642 - +1.2 226,646 + +1.4 226,647 - +1.5 226,682 - -1.8 226,682 - -1.1 226,696 - +1.1 226,696 - +1.7 226,696 - +1.1 226,697 + -0.8 226,697 + +0.7 226,698 - +0.3 226,747 + -1.8 226,747 + +2.0 226,747 + +1.3 226,748 - -0.6 226,752 - +0.0
Or see this region's nucleotide sequence