Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt cyoE and NOLOHH_01320 are separated by 184 nucleotides NOLOHH_01320 and NOLOHH_01325 overlap by 17 nucleotides NOLOHH_01325 and NOLOHH_01330 are separated by 55 nucleotides
NOLOHH_01315: cyoE - heme o synthase, at 156,229 to 157,119
cyoE
NOLOHH_01320: NOLOHH_01320 - DUF1778 domain-containing protein, at 157,304 to 157,615
_01320
NOLOHH_01325: NOLOHH_01325 - N-acetyltransferase, at 157,599 to 158,141
_01325
NOLOHH_01330: NOLOHH_01330 - sel1 repeat family protein, at 158,197 to 159,168
_01330
Position (kb) 157
158
159 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 156.599 kb on - strand, within cyoE at 156.607 kb on + strand, within cyoE at 156.608 kb on - strand, within cyoE at 156.628 kb on + strand, within cyoE at 156.629 kb on - strand, within cyoE at 156.760 kb on + strand, within cyoE at 156.761 kb on - strand, within cyoE at 156.783 kb on + strand, within cyoE at 156.825 kb on - strand, within cyoE at 156.825 kb on - strand, within cyoE at 156.862 kb on + strand, within cyoE at 156.863 kb on - strand, within cyoE at 156.863 kb on - strand, within cyoE at 156.864 kb on + strand, within cyoE at 156.865 kb on - strand, within cyoE at 156.865 kb on - strand, within cyoE at 156.865 kb on - strand, within cyoE at 156.921 kb on + strand, within cyoE at 156.921 kb on + strand, within cyoE at 156.921 kb on + strand, within cyoE at 156.921 kb on + strand, within cyoE at 156.921 kb on + strand, within cyoE at 156.922 kb on - strand, within cyoE at 156.922 kb on - strand, within cyoE at 156.922 kb on - strand, within cyoE at 156.922 kb on - strand, within cyoE at 156.925 kb on + strand, within cyoE at 156.925 kb on + strand, within cyoE at 156.926 kb on - strand, within cyoE at 156.926 kb on - strand, within cyoE at 156.966 kb on + strand, within cyoE at 156.967 kb on - strand, within cyoE at 156.984 kb on + strand, within cyoE at 156.985 kb on - strand, within cyoE at 157.033 kb on - strand at 157.077 kb on + strand at 157.077 kb on + strand at 157.194 kb on - strand at 157.302 kb on + strand at 157.646 kb on + strand at 157.646 kb on + strand at 157.646 kb on + strand at 157.647 kb on - strand at 157.650 kb on + strand at 157.661 kb on + strand, within NOLOHH_01325 at 157.664 kb on + strand, within NOLOHH_01325 at 157.668 kb on + strand, within NOLOHH_01325 at 157.668 kb on + strand, within NOLOHH_01325 at 157.668 kb on + strand, within NOLOHH_01325 at 157.706 kb on + strand, within NOLOHH_01325 at 157.720 kb on + strand, within NOLOHH_01325 at 157.720 kb on + strand, within NOLOHH_01325 at 157.748 kb on + strand, within NOLOHH_01325 at 157.923 kb on + strand, within NOLOHH_01325 at 157.951 kb on + strand, within NOLOHH_01325 at 157.951 kb on + strand, within NOLOHH_01325 at 157.954 kb on + strand, within NOLOHH_01325 at 157.954 kb on + strand, within NOLOHH_01325 at 157.975 kb on + strand, within NOLOHH_01325 at 157.975 kb on + strand, within NOLOHH_01325 at 157.981 kb on + strand, within NOLOHH_01325 at 158.003 kb on + strand, within NOLOHH_01325 at 158.101 kb on + strand at 158.102 kb on - strand at 158.105 kb on + strand at 158.126 kb on + strand at 158.144 kb on + strand at 158.319 kb on + strand, within NOLOHH_01330 at 158.347 kb on - strand, within NOLOHH_01330 at 158.360 kb on - strand, within NOLOHH_01330 at 158.544 kb on + strand, within NOLOHH_01330 at 158.655 kb on - strand, within NOLOHH_01330 at 158.694 kb on + strand, within NOLOHH_01330 at 158.695 kb on - strand, within NOLOHH_01330 at 158.727 kb on - strand, within NOLOHH_01330 at 158.731 kb on - strand, within NOLOHH_01330 at 158.786 kb on - strand, within NOLOHH_01330 at 158.786 kb on - strand, within NOLOHH_01330 at 158.835 kb on - strand, within NOLOHH_01330 at 158.835 kb on - strand, within NOLOHH_01330 at 158.898 kb on + strand, within NOLOHH_01330 at 158.899 kb on - strand, within NOLOHH_01330 at 158.899 kb on - strand, within NOLOHH_01330 at 158.946 kb on - strand, within NOLOHH_01330 at 158.977 kb on - strand, within NOLOHH_01330 at 159.007 kb on - strand, within NOLOHH_01330 at 159.041 kb on - strand, within NOLOHH_01330 at 159.137 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 156,599 - cyoE NOLOHH_01315 0.42 -1.4 156,607 + cyoE NOLOHH_01315 0.42 +0.7 156,608 - cyoE NOLOHH_01315 0.43 +0.3 156,628 + cyoE NOLOHH_01315 0.45 +0.9 156,629 - cyoE NOLOHH_01315 0.45 -0.2 156,760 + cyoE NOLOHH_01315 0.60 -3.0 156,761 - cyoE NOLOHH_01315 0.60 +1.2 156,783 + cyoE NOLOHH_01315 0.62 +0.8 156,825 - cyoE NOLOHH_01315 0.67 -1.4 156,825 - cyoE NOLOHH_01315 0.67 -0.6 156,862 + cyoE NOLOHH_01315 0.71 +1.7 156,863 - cyoE NOLOHH_01315 0.71 +1.0 156,863 - cyoE NOLOHH_01315 0.71 +1.4 156,864 + cyoE NOLOHH_01315 0.71 -0.2 156,865 - cyoE NOLOHH_01315 0.71 +2.7 156,865 - cyoE NOLOHH_01315 0.71 -1.6 156,865 - cyoE NOLOHH_01315 0.71 +1.0 156,921 + cyoE NOLOHH_01315 0.78 -0.4 156,921 + cyoE NOLOHH_01315 0.78 -0.2 156,921 + cyoE NOLOHH_01315 0.78 +2.0 156,921 + cyoE NOLOHH_01315 0.78 +0.7 156,921 + cyoE NOLOHH_01315 0.78 +0.4 156,922 - cyoE NOLOHH_01315 0.78 -1.2 156,922 - cyoE NOLOHH_01315 0.78 +0.4 156,922 - cyoE NOLOHH_01315 0.78 +0.3 156,922 - cyoE NOLOHH_01315 0.78 -0.2 156,925 + cyoE NOLOHH_01315 0.78 -1.3 156,925 + cyoE NOLOHH_01315 0.78 -1.2 156,926 - cyoE NOLOHH_01315 0.78 -1.2 156,926 - cyoE NOLOHH_01315 0.78 +0.4 156,966 + cyoE NOLOHH_01315 0.83 +0.4 156,967 - cyoE NOLOHH_01315 0.83 -0.7 156,984 + cyoE NOLOHH_01315 0.85 -0.5 156,985 - cyoE NOLOHH_01315 0.85 +1.1 157,033 - -0.6 157,077 + -0.2 157,077 + +0.1 157,194 - +1.4 157,302 + +1.4 157,646 + -0.7 157,646 + -0.1 157,646 + -0.2 157,647 - +1.4 157,650 + +1.3 157,661 + NOLOHH_01325 0.11 -0.1 157,664 + NOLOHH_01325 0.12 -1.5 157,668 + NOLOHH_01325 0.13 -0.3 157,668 + NOLOHH_01325 0.13 -0.6 157,668 + NOLOHH_01325 0.13 +0.3 157,706 + NOLOHH_01325 0.20 -0.4 157,720 + NOLOHH_01325 0.22 +0.8 157,720 + NOLOHH_01325 0.22 +0.4 157,748 + NOLOHH_01325 0.27 -1.2 157,923 + NOLOHH_01325 0.60 +0.8 157,951 + NOLOHH_01325 0.65 -0.2 157,951 + NOLOHH_01325 0.65 +0.0 157,954 + NOLOHH_01325 0.65 +0.9 157,954 + NOLOHH_01325 0.65 +0.6 157,975 + NOLOHH_01325 0.69 -0.2 157,975 + NOLOHH_01325 0.69 -0.6 157,981 + NOLOHH_01325 0.70 +0.0 158,003 + NOLOHH_01325 0.74 +0.0 158,101 + +0.1 158,102 - +0.4 158,105 + -0.2 158,126 + +0.2 158,144 + +0.4 158,319 + NOLOHH_01330 0.13 +2.0 158,347 - NOLOHH_01330 0.15 -0.8 158,360 - NOLOHH_01330 0.17 +1.0 158,544 + NOLOHH_01330 0.36 -0.9 158,655 - NOLOHH_01330 0.47 -0.9 158,694 + NOLOHH_01330 0.51 +0.8 158,695 - NOLOHH_01330 0.51 -1.1 158,727 - NOLOHH_01330 0.55 +1.6 158,731 - NOLOHH_01330 0.55 +0.0 158,786 - NOLOHH_01330 0.61 -0.1 158,786 - NOLOHH_01330 0.61 -0.8 158,835 - NOLOHH_01330 0.66 -0.5 158,835 - NOLOHH_01330 0.66 +0.4 158,898 + NOLOHH_01330 0.72 -0.6 158,899 - NOLOHH_01330 0.72 +1.2 158,899 - NOLOHH_01330 0.72 -1.8 158,946 - NOLOHH_01330 0.77 -0.6 158,977 - NOLOHH_01330 0.80 -0.4 159,007 - NOLOHH_01330 0.83 +1.4 159,041 - NOLOHH_01330 0.87 +0.9 159,137 - -0.2
Or see this region's nucleotide sequence