Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybaT and glsA are separated by 2 nucleotides glsA and copA are separated by 261 nucleotides
NOLOHH_01005: ybaT - Inner membrane transport protein YbaT, at 89,094 to 90,386
ybaT
NOLOHH_01010: glsA - glutaminase A, at 90,389 to 91,321
glsA
NOLOHH_01015: copA - copper-exporting P-type ATPase CopA, at 91,583 to 94,087
copA
Position (kb) 90
91
92 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 89.412 kb on - strand, within ybaT at 89.432 kb on + strand, within ybaT at 89.432 kb on + strand, within ybaT at 89.433 kb on - strand, within ybaT at 89.440 kb on - strand, within ybaT at 89.440 kb on - strand, within ybaT at 89.440 kb on - strand, within ybaT at 89.483 kb on + strand, within ybaT at 89.609 kb on - strand, within ybaT at 89.632 kb on - strand, within ybaT at 89.664 kb on - strand, within ybaT at 89.664 kb on - strand, within ybaT at 89.664 kb on - strand, within ybaT at 89.664 kb on - strand, within ybaT at 89.664 kb on - strand, within ybaT at 89.665 kb on + strand, within ybaT at 89.665 kb on + strand, within ybaT at 89.665 kb on + strand, within ybaT at 89.665 kb on + strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.666 kb on - strand, within ybaT at 89.712 kb on - strand, within ybaT at 89.736 kb on - strand, within ybaT at 89.837 kb on + strand, within ybaT at 89.838 kb on - strand, within ybaT at 89.996 kb on + strand, within ybaT at 89.996 kb on + strand, within ybaT at 89.997 kb on - strand, within ybaT at 90.040 kb on + strand, within ybaT at 90.040 kb on + strand, within ybaT at 90.041 kb on - strand, within ybaT at 90.095 kb on - strand, within ybaT at 90.095 kb on - strand, within ybaT at 90.176 kb on - strand, within ybaT at 90.197 kb on - strand, within ybaT at 90.197 kb on - strand, within ybaT at 90.197 kb on - strand, within ybaT at 90.197 kb on - strand, within ybaT at 90.225 kb on - strand, within ybaT at 90.343 kb on - strand at 90.369 kb on - strand at 90.369 kb on - strand at 90.398 kb on - strand at 90.408 kb on + strand at 90.409 kb on - strand at 90.409 kb on - strand at 90.624 kb on + strand, within glsA at 90.625 kb on - strand, within glsA at 90.718 kb on + strand, within glsA at 90.719 kb on - strand, within glsA at 90.747 kb on + strand, within glsA at 90.747 kb on + strand, within glsA at 90.747 kb on + strand, within glsA at 90.747 kb on + strand, within glsA at 90.748 kb on - strand, within glsA at 90.748 kb on - strand, within glsA at 90.748 kb on - strand, within glsA at 90.898 kb on + strand, within glsA at 90.903 kb on - strand, within glsA at 90.903 kb on - strand, within glsA at 90.903 kb on - strand, within glsA at 90.974 kb on + strand, within glsA at 90.975 kb on - strand, within glsA at 90.975 kb on - strand, within glsA at 91.019 kb on - strand, within glsA at 91.028 kb on - strand, within glsA at 91.028 kb on - strand, within glsA at 91.108 kb on + strand, within glsA at 91.109 kb on - strand, within glsA at 91.109 kb on - strand, within glsA at 91.144 kb on - strand, within glsA at 91.151 kb on - strand, within glsA at 91.211 kb on - strand, within glsA at 91.214 kb on + strand, within glsA at 91.214 kb on + strand, within glsA at 91.214 kb on + strand, within glsA at 91.215 kb on - strand, within glsA at 91.236 kb on + strand at 91.236 kb on + strand at 91.237 kb on - strand at 91.237 kb on - strand at 91.237 kb on - strand at 91.278 kb on + strand at 91.279 kb on - strand at 91.279 kb on - strand at 91.317 kb on - strand at 91.340 kb on + strand at 91.340 kb on + strand at 91.395 kb on + strand at 91.396 kb on - strand at 91.401 kb on - strand at 91.415 kb on - strand at 91.569 kb on + strand at 91.569 kb on + strand at 91.569 kb on + strand at 91.570 kb on - strand at 91.570 kb on - strand at 91.582 kb on + strand at 91.583 kb on - strand at 91.583 kb on - strand at 91.693 kb on + strand at 91.693 kb on + strand at 91.776 kb on + strand at 91.932 kb on + strand, within copA at 91.994 kb on - strand, within copA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 89,412 - ybaT NOLOHH_01005 0.25 +0.4 89,432 + ybaT NOLOHH_01005 0.26 +1.3 89,432 + ybaT NOLOHH_01005 0.26 +2.2 89,433 - ybaT NOLOHH_01005 0.26 +0.6 89,440 - ybaT NOLOHH_01005 0.27 -3.0 89,440 - ybaT NOLOHH_01005 0.27 +0.6 89,440 - ybaT NOLOHH_01005 0.27 +0.6 89,483 + ybaT NOLOHH_01005 0.30 -0.4 89,609 - ybaT NOLOHH_01005 0.40 +0.4 89,632 - ybaT NOLOHH_01005 0.42 -0.5 89,664 - ybaT NOLOHH_01005 0.44 -0.6 89,664 - ybaT NOLOHH_01005 0.44 +0.4 89,664 - ybaT NOLOHH_01005 0.44 +0.2 89,664 - ybaT NOLOHH_01005 0.44 -0.6 89,664 - ybaT NOLOHH_01005 0.44 -0.6 89,665 + ybaT NOLOHH_01005 0.44 -0.2 89,665 + ybaT NOLOHH_01005 0.44 -0.2 89,665 + ybaT NOLOHH_01005 0.44 -0.6 89,665 + ybaT NOLOHH_01005 0.44 -0.6 89,666 - ybaT NOLOHH_01005 0.44 -1.6 89,666 - ybaT NOLOHH_01005 0.44 +0.8 89,666 - ybaT NOLOHH_01005 0.44 +0.1 89,666 - ybaT NOLOHH_01005 0.44 +0.1 89,666 - ybaT NOLOHH_01005 0.44 -0.3 89,666 - ybaT NOLOHH_01005 0.44 -1.2 89,666 - ybaT NOLOHH_01005 0.44 -0.6 89,666 - ybaT NOLOHH_01005 0.44 -0.2 89,666 - ybaT NOLOHH_01005 0.44 -0.2 89,712 - ybaT NOLOHH_01005 0.48 +0.4 89,736 - ybaT NOLOHH_01005 0.50 +0.7 89,837 + ybaT NOLOHH_01005 0.57 -1.5 89,838 - ybaT NOLOHH_01005 0.58 -3.2 89,996 + ybaT NOLOHH_01005 0.70 -1.5 89,996 + ybaT NOLOHH_01005 0.70 -0.1 89,997 - ybaT NOLOHH_01005 0.70 +0.4 90,040 + ybaT NOLOHH_01005 0.73 +0.4 90,040 + ybaT NOLOHH_01005 0.73 +0.1 90,041 - ybaT NOLOHH_01005 0.73 +0.2 90,095 - ybaT NOLOHH_01005 0.77 +0.7 90,095 - ybaT NOLOHH_01005 0.77 -0.4 90,176 - ybaT NOLOHH_01005 0.84 +0.7 90,197 - ybaT NOLOHH_01005 0.85 -1.3 90,197 - ybaT NOLOHH_01005 0.85 -1.2 90,197 - ybaT NOLOHH_01005 0.85 +0.4 90,197 - ybaT NOLOHH_01005 0.85 +1.0 90,225 - ybaT NOLOHH_01005 0.87 +1.4 90,343 - -0.6 90,369 - +0.0 90,369 - -0.2 90,398 - -1.7 90,408 + +1.0 90,409 - -0.1 90,409 - -0.7 90,624 + glsA NOLOHH_01010 0.25 -1.2 90,625 - glsA NOLOHH_01010 0.25 -1.4 90,718 + glsA NOLOHH_01010 0.35 -0.2 90,719 - glsA NOLOHH_01010 0.35 +2.0 90,747 + glsA NOLOHH_01010 0.38 -0.6 90,747 + glsA NOLOHH_01010 0.38 +1.2 90,747 + glsA NOLOHH_01010 0.38 +0.6 90,747 + glsA NOLOHH_01010 0.38 +1.0 90,748 - glsA NOLOHH_01010 0.38 +0.2 90,748 - glsA NOLOHH_01010 0.38 -0.6 90,748 - glsA NOLOHH_01010 0.38 -0.2 90,898 + glsA NOLOHH_01010 0.55 -1.2 90,903 - glsA NOLOHH_01010 0.55 -0.6 90,903 - glsA NOLOHH_01010 0.55 -0.9 90,903 - glsA NOLOHH_01010 0.55 +1.4 90,974 + glsA NOLOHH_01010 0.63 +1.1 90,975 - glsA NOLOHH_01010 0.63 +0.4 90,975 - glsA NOLOHH_01010 0.63 +0.4 91,019 - glsA NOLOHH_01010 0.68 +0.8 91,028 - glsA NOLOHH_01010 0.68 +3.0 91,028 - glsA NOLOHH_01010 0.68 +0.4 91,108 + glsA NOLOHH_01010 0.77 -1.6 91,109 - glsA NOLOHH_01010 0.77 -0.1 91,109 - glsA NOLOHH_01010 0.77 -0.6 91,144 - glsA NOLOHH_01010 0.81 +0.8 91,151 - glsA NOLOHH_01010 0.82 +0.1 91,211 - glsA NOLOHH_01010 0.88 +0.4 91,214 + glsA NOLOHH_01010 0.88 +1.1 91,214 + glsA NOLOHH_01010 0.88 +0.0 91,214 + glsA NOLOHH_01010 0.88 +0.4 91,215 - glsA NOLOHH_01010 0.89 -0.2 91,236 + -0.2 91,236 + +2.0 91,237 - +1.4 91,237 - +0.4 91,237 - +1.7 91,278 + -0.3 91,279 - -1.9 91,279 - -0.6 91,317 - +0.4 91,340 + -1.5 91,340 + -1.7 91,395 + +0.5 91,396 - +0.3 91,401 - +0.0 91,415 - +0.1 91,569 + +0.0 91,569 + +0.0 91,569 + -1.2 91,570 - -1.3 91,570 - +0.8 91,582 + -0.2 91,583 - -1.3 91,583 - +0.4 91,693 + +0.1 91,693 + -0.3 91,776 + +2.2 91,932 + copA NOLOHH_01015 0.14 -0.9 91,994 - copA NOLOHH_01015 0.16 -1.2
Or see this region's nucleotide sequence