Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_00685 and NOLOHH_00690 are separated by 46 nucleotides NOLOHH_00690 and NOLOHH_00695 overlap by 4 nucleotides NOLOHH_00695 and NOLOHH_00700 are separated by 500 nucleotides NOLOHH_00700 and gam are separated by 76 nucleotides
NOLOHH_00685: NOLOHH_00685 - HTH cro/C1-type domain-containing protein, at 30,544 to 31,029
_00685
NOLOHH_00690: NOLOHH_00690 - Phage-like protein, at 31,076 to 31,924
_00690
NOLOHH_00695: NOLOHH_00695 - DUF3037 domain-containing protein, at 31,921 to 32,727
_00695
NOLOHH_00700: NOLOHH_00700 - cell division inhibitor protein, at 33,228 to 33,434
_00700
NOLOHH_00705: gam - Host-nuclease inhibitor protein gam, at 33,511 to 33,807
gam
Position (kb)
31
32
33 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 31.014 kb on + strand at 31.047 kb on - strand at 31.225 kb on + strand, within NOLOHH_00690 at 31.247 kb on + strand, within NOLOHH_00690 at 31.248 kb on - strand, within NOLOHH_00690 at 31.256 kb on - strand, within NOLOHH_00690 at 31.335 kb on + strand, within NOLOHH_00690 at 31.336 kb on - strand, within NOLOHH_00690 at 31.384 kb on + strand, within NOLOHH_00690 at 31.384 kb on + strand, within NOLOHH_00690 at 31.385 kb on - strand, within NOLOHH_00690 at 31.385 kb on - strand, within NOLOHH_00690 at 31.517 kb on + strand, within NOLOHH_00690 at 31.517 kb on + strand, within NOLOHH_00690 at 31.518 kb on - strand, within NOLOHH_00690 at 31.537 kb on - strand, within NOLOHH_00690 at 31.537 kb on - strand, within NOLOHH_00690 at 31.540 kb on + strand, within NOLOHH_00690 at 31.541 kb on - strand, within NOLOHH_00690 at 31.565 kb on + strand, within NOLOHH_00690 at 31.565 kb on + strand, within NOLOHH_00690 at 31.565 kb on + strand, within NOLOHH_00690 at 31.565 kb on + strand, within NOLOHH_00690 at 31.569 kb on + strand, within NOLOHH_00690 at 31.569 kb on + strand, within NOLOHH_00690 at 31.569 kb on + strand, within NOLOHH_00690 at 31.569 kb on + strand, within NOLOHH_00690 at 31.569 kb on + strand, within NOLOHH_00690 at 31.570 kb on - strand, within NOLOHH_00690 at 31.570 kb on - strand, within NOLOHH_00690 at 31.571 kb on + strand, within NOLOHH_00690 at 31.571 kb on + strand, within NOLOHH_00690 at 31.571 kb on + strand, within NOLOHH_00690 at 31.571 kb on + strand, within NOLOHH_00690 at 31.572 kb on - strand, within NOLOHH_00690 at 31.597 kb on + strand, within NOLOHH_00690 at 31.597 kb on + strand, within NOLOHH_00690 at 31.604 kb on - strand, within NOLOHH_00690 at 31.623 kb on + strand, within NOLOHH_00690 at 31.623 kb on + strand, within NOLOHH_00690 at 31.637 kb on - strand, within NOLOHH_00690 at 31.654 kb on + strand, within NOLOHH_00690 at 31.663 kb on + strand, within NOLOHH_00690 at 31.663 kb on + strand, within NOLOHH_00690 at 31.663 kb on + strand, within NOLOHH_00690 at 31.663 kb on + strand, within NOLOHH_00690 at 31.663 kb on + strand, within NOLOHH_00690 at 31.664 kb on - strand, within NOLOHH_00690 at 31.664 kb on - strand, within NOLOHH_00690 at 31.664 kb on - strand, within NOLOHH_00690 at 31.665 kb on + strand, within NOLOHH_00690 at 31.665 kb on + strand, within NOLOHH_00690 at 31.665 kb on + strand, within NOLOHH_00690 at 31.665 kb on + strand, within NOLOHH_00690 at 31.665 kb on + strand, within NOLOHH_00690 at 31.665 kb on + strand, within NOLOHH_00690 at 31.665 kb on + strand, within NOLOHH_00690 at 31.666 kb on - strand, within NOLOHH_00690 at 31.668 kb on + strand, within NOLOHH_00690 at 31.669 kb on - strand, within NOLOHH_00690 at 31.752 kb on + strand, within NOLOHH_00690 at 31.752 kb on + strand, within NOLOHH_00690 at 31.753 kb on - strand, within NOLOHH_00690 at 31.792 kb on + strand, within NOLOHH_00690 at 31.794 kb on + strand, within NOLOHH_00690 at 31.803 kb on + strand, within NOLOHH_00690 at 31.807 kb on + strand, within NOLOHH_00690 at 31.807 kb on + strand, within NOLOHH_00690 at 31.807 kb on + strand, within NOLOHH_00690 at 31.807 kb on + strand, within NOLOHH_00690 at 31.807 kb on + strand, within NOLOHH_00690 at 31.844 kb on - strand at 31.893 kb on + strand at 33.013 kb on - strand at 33.111 kb on - strand at 33.111 kb on - strand at 33.111 kb on - strand at 33.113 kb on - strand at 33.139 kb on + strand at 33.140 kb on - strand at 33.140 kb on - strand at 33.140 kb on - strand at 33.140 kb on - strand at 33.140 kb on - strand at 33.140 kb on - strand at 33.144 kb on - strand at 33.190 kb on + strand at 33.191 kb on - strand at 33.191 kb on - strand at 33.191 kb on - strand at 33.191 kb on - strand at 33.192 kb on + strand at 33.192 kb on + strand at 33.192 kb on + strand at 33.192 kb on + strand at 33.193 kb on - strand at 33.193 kb on - strand at 33.212 kb on - strand at 33.243 kb on + strand at 33.308 kb on + strand, within NOLOHH_00700 at 33.372 kb on + strand, within NOLOHH_00700 at 33.372 kb on + strand, within NOLOHH_00700 at 33.372 kb on + strand, within NOLOHH_00700 at 33.372 kb on + strand, within NOLOHH_00700 at 33.373 kb on - strand, within NOLOHH_00700 at 33.373 kb on - strand, within NOLOHH_00700 at 33.373 kb on - strand, within NOLOHH_00700 at 33.373 kb on - strand, within NOLOHH_00700 at 33.373 kb on - strand, within NOLOHH_00700 at 33.520 kb on + strand at 33.650 kb on + strand, within gam at 33.650 kb on + strand, within gam
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 31,014 + +0.3 31,047 - -0.6 31,225 + NOLOHH_00690 0.18 -0.4 31,247 + NOLOHH_00690 0.20 +0.4 31,248 - NOLOHH_00690 0.20 +1.4 31,256 - NOLOHH_00690 0.21 -0.6 31,335 + NOLOHH_00690 0.31 +1.0 31,336 - NOLOHH_00690 0.31 +0.0 31,384 + NOLOHH_00690 0.36 +1.4 31,384 + NOLOHH_00690 0.36 +1.4 31,385 - NOLOHH_00690 0.36 +0.7 31,385 - NOLOHH_00690 0.36 -1.1 31,517 + NOLOHH_00690 0.52 -1.9 31,517 + NOLOHH_00690 0.52 +0.2 31,518 - NOLOHH_00690 0.52 +1.2 31,537 - NOLOHH_00690 0.54 -0.4 31,537 - NOLOHH_00690 0.54 -0.4 31,540 + NOLOHH_00690 0.55 +0.8 31,541 - NOLOHH_00690 0.55 -1.8 31,565 + NOLOHH_00690 0.58 -0.6 31,565 + NOLOHH_00690 0.58 +0.4 31,565 + NOLOHH_00690 0.58 -0.0 31,565 + NOLOHH_00690 0.58 +1.2 31,569 + NOLOHH_00690 0.58 -0.3 31,569 + NOLOHH_00690 0.58 -0.1 31,569 + NOLOHH_00690 0.58 -0.5 31,569 + NOLOHH_00690 0.58 -0.6 31,569 + NOLOHH_00690 0.58 -0.6 31,570 - NOLOHH_00690 0.58 +2.4 31,570 - NOLOHH_00690 0.58 +0.2 31,571 + NOLOHH_00690 0.58 +0.4 31,571 + NOLOHH_00690 0.58 +0.0 31,571 + NOLOHH_00690 0.58 -0.1 31,571 + NOLOHH_00690 0.58 -0.6 31,572 - NOLOHH_00690 0.58 +1.4 31,597 + NOLOHH_00690 0.61 +1.0 31,597 + NOLOHH_00690 0.61 -1.6 31,604 - NOLOHH_00690 0.62 -0.4 31,623 + NOLOHH_00690 0.64 -0.4 31,623 + NOLOHH_00690 0.64 -1.2 31,637 - NOLOHH_00690 0.66 +0.7 31,654 + NOLOHH_00690 0.68 -1.2 31,663 + NOLOHH_00690 0.69 -0.2 31,663 + NOLOHH_00690 0.69 -0.6 31,663 + NOLOHH_00690 0.69 -0.3 31,663 + NOLOHH_00690 0.69 -0.7 31,663 + NOLOHH_00690 0.69 +0.1 31,664 - NOLOHH_00690 0.69 -0.9 31,664 - NOLOHH_00690 0.69 +0.6 31,664 - NOLOHH_00690 0.69 -1.8 31,665 + NOLOHH_00690 0.69 -1.2 31,665 + NOLOHH_00690 0.69 +2.2 31,665 + NOLOHH_00690 0.69 -1.6 31,665 + NOLOHH_00690 0.69 +0.0 31,665 + NOLOHH_00690 0.69 -0.7 31,665 + NOLOHH_00690 0.69 +0.7 31,665 + NOLOHH_00690 0.69 -1.0 31,666 - NOLOHH_00690 0.69 +1.2 31,668 + NOLOHH_00690 0.70 -0.4 31,669 - NOLOHH_00690 0.70 -0.9 31,752 + NOLOHH_00690 0.80 +0.1 31,752 + NOLOHH_00690 0.80 +1.6 31,753 - NOLOHH_00690 0.80 +2.0 31,792 + NOLOHH_00690 0.84 +1.0 31,794 + NOLOHH_00690 0.85 +0.6 31,803 + NOLOHH_00690 0.86 +1.1 31,807 + NOLOHH_00690 0.86 -0.2 31,807 + NOLOHH_00690 0.86 -0.2 31,807 + NOLOHH_00690 0.86 -0.7 31,807 + NOLOHH_00690 0.86 -0.6 31,807 + NOLOHH_00690 0.86 +0.8 31,844 - -0.2 31,893 + +0.0 33,013 - -1.2 33,111 - -1.6 33,111 - -0.6 33,111 - -1.0 33,113 - +1.0 33,139 + +0.4 33,140 - +0.4 33,140 - -2.0 33,140 - -0.2 33,140 - -0.6 33,140 - -1.2 33,140 - +0.1 33,144 - -0.2 33,190 + +0.2 33,191 - +0.1 33,191 - -0.6 33,191 - +0.7 33,191 - +0.6 33,192 + +0.6 33,192 + -1.0 33,192 + +0.5 33,192 + +1.1 33,193 - +0.4 33,193 - -0.3 33,212 - -0.7 33,243 + -0.1 33,308 + NOLOHH_00700 0.39 +0.7 33,372 + NOLOHH_00700 0.70 -1.4 33,372 + NOLOHH_00700 0.70 +1.2 33,372 + NOLOHH_00700 0.70 -0.4 33,372 + NOLOHH_00700 0.70 -1.0 33,373 - NOLOHH_00700 0.70 +0.0 33,373 - NOLOHH_00700 0.70 -1.7 33,373 - NOLOHH_00700 0.70 -0.4 33,373 - NOLOHH_00700 0.70 -1.3 33,373 - NOLOHH_00700 0.70 +1.0 33,520 + -0.8 33,650 + gam NOLOHH_00705 0.47 +0.0 33,650 + gam NOLOHH_00705 0.47 -0.3
Or see this region's nucleotide sequence