Strain Fitness in Escherichia coli ECOR27 around NOLOHH_24280

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
6,613	-	psiA	NOLOHH_24270	0.47	+1.0
6,756	+	psiA	NOLOHH_24270	0.67	+0.3
6,756	+	psiA	NOLOHH_24270	0.67	+1.0
6,757	-	psiA	NOLOHH_24270	0.67	+2.0
6,876	+	psiA	NOLOHH_24270	0.83	-0.9
7,020	+				-0.0
7,195	+	psiB	NOLOHH_24275	0.47	-0.3
7,196	-	psiB	NOLOHH_24275	0.47	+1.5
7,196	-	psiB	NOLOHH_24275	0.47	+2.4
7,373	+	psiB	NOLOHH_24275	0.88	+2.0
7,396	+				+0.4
7,396	+				+1.7
7,397	-				+0.5
7,397	-				-0.1
7,399	+				-0.2
7,399	+				-0.0
7,399	+				-1.0
7,508	+				-0.0
7,540	+				+2.0
7,540	+				-0.4
7,540	+				+1.5
7,540	+				-1.4
7,541	-				+0.7
7,581	+				-1.0
7,920	+	yubM	NOLOHH_24280	0.22	+1.0
7,920	+	yubM	NOLOHH_24280	0.22	-0.0
7,920	+	yubM	NOLOHH_24280	0.22	-0.0
8,004	+	yubM	NOLOHH_24280	0.27	+1.4
8,005	-	yubM	NOLOHH_24280	0.27	-0.0
8,005	-	yubM	NOLOHH_24280	0.27	-0.0
8,032	-	yubM	NOLOHH_24280	0.28	+1.0
8,484	-	yubM	NOLOHH_24280	0.51	+1.0
8,484	-	yubM	NOLOHH_24280	0.51	-0.6
8,489	+	yubM	NOLOHH_24280	0.51	+1.0
8,489	+	yubM	NOLOHH_24280	0.51	+1.4
8,489	+	yubM	NOLOHH_24280	0.51	+1.7
8,490	-	yubM	NOLOHH_24280	0.51	+1.0
8,490	-	yubM	NOLOHH_24280	0.51	-0.5
8,490	-	yubM	NOLOHH_24280	0.51	+2.0
8,490	-	yubM	NOLOHH_24280	0.51	+0.7
8,490	-	yubM	NOLOHH_24280	0.51	-0.6
8,530	-	yubM	NOLOHH_24280	0.53	+0.4
8,630	+	yubM	NOLOHH_24280	0.59	-0.8
8,631	-	yubM	NOLOHH_24280	0.59	-0.0
8,631	-	yubM	NOLOHH_24280	0.59	-0.6
8,710	-	yubM	NOLOHH_24280	0.63	-0.9
8,815	+	yubM	NOLOHH_24280	0.68	+2.5
8,815	+	yubM	NOLOHH_24280	0.68	+1.0
9,107	-	yubM	NOLOHH_24280	0.83	+1.0
9,244	-	yubM	NOLOHH_24280	0.90	+2.5
9,312	+				+0.7
9,396	+				-0.0
9,426	+				+1.1
9,435	+				+0.6
9,444	+				-0.0
9,444	+				+0.5
9,444	+				-0.1
9,444	+				+0.5
9,444	+				-0.5
9,444	+				-1.6
9,445	-				+1.2
9,448	+				+1.0
9,448	+				+1.0
9,448	+				+0.1
9,448	+				+0.0
9,448	+				-0.0
9,448	+				+1.8
9,448	+				-1.5
9,449	-				-0.9
9,449	-				-0.0
9,449	-				-1.9
9,449	-				-1.4
9,452	-				+1.4
9,452	-				-0.2
9,469	+				+0.4
9,469	+				+1.5
9,515	+				-0.0
9,723	+				+1.0
9,878	+	ssb	NOLOHH_24290	0.15	-0.0
9,879	-	ssb	NOLOHH_24290	0.15	+1.0
10,040	-	ssb	NOLOHH_24290	0.45	-0.6
10,050	-	ssb	NOLOHH_24290	0.47	+1.5
10,093	+	ssb	NOLOHH_24290	0.55	-0.0
10,118	-	ssb	NOLOHH_24290	0.60	-0.3
10,118	-	ssb	NOLOHH_24290	0.60	-1.6
10,262	-	ssb	NOLOHH_24290	0.87	+2.0
10,262	-	ssb	NOLOHH_24290	0.87	-1.4
10,334	-				+1.0
10,334	-				+2.5
10,334	-				-0.6