Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybeZ and ybeY overlap by 4 nucleotides ybeY and corC are separated by 89 nucleotides corC and lnt are separated by 24 nucleotides
NOLOHH_23610: ybeZ - PhoH-like protein, at 4,645,691 to 4,646,770
ybeZ
NOLOHH_23615: ybeY - rRNA maturation RNase YbeY, at 4,646,767 to 4,647,234
ybeY
NOLOHH_23620: corC - CNNM family magnesium/cobalt transport protein CorC, at 4,647,324 to 4,648,202
corC
NOLOHH_23625: lnt - apolipoprotein N-acyltransferase, at 4,648,227 to 4,649,765
lnt
Position (kb)
4646
4647
4648 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4645.928 kb on + strand, within ybeZ at 4646.079 kb on + strand, within ybeZ at 4646.111 kb on + strand, within ybeZ at 4646.111 kb on + strand, within ybeZ at 4646.111 kb on + strand, within ybeZ at 4646.140 kb on + strand, within ybeZ at 4646.140 kb on + strand, within ybeZ at 4646.177 kb on + strand, within ybeZ at 4646.177 kb on + strand, within ybeZ at 4646.177 kb on + strand, within ybeZ at 4646.292 kb on + strand, within ybeZ at 4646.327 kb on + strand, within ybeZ at 4646.411 kb on + strand, within ybeZ at 4646.411 kb on + strand, within ybeZ at 4646.411 kb on + strand, within ybeZ at 4646.411 kb on + strand, within ybeZ at 4646.411 kb on + strand, within ybeZ at 4646.411 kb on + strand, within ybeZ at 4646.411 kb on + strand, within ybeZ at 4646.563 kb on + strand, within ybeZ at 4646.569 kb on + strand, within ybeZ at 4646.580 kb on + strand, within ybeZ at 4646.580 kb on + strand, within ybeZ at 4646.626 kb on + strand, within ybeZ at 4647.214 kb on + strand at 4647.214 kb on + strand at 4647.214 kb on + strand at 4647.300 kb on + strand at 4647.300 kb on + strand at 4647.300 kb on + strand at 4647.300 kb on + strand at 4647.300 kb on + strand at 4647.698 kb on + strand, within corC at 4647.767 kb on + strand, within corC at 4647.909 kb on + strand, within corC at 4647.909 kb on + strand, within corC at 4648.091 kb on + strand, within corC at 4648.142 kb on + strand at 4648.142 kb on + strand at 4648.145 kb on + strand at 4648.145 kb on + strand at 4648.200 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 4,645,928 + ybeZ NOLOHH_23610 0.22 +0.5 4,646,079 + ybeZ NOLOHH_23610 0.36 -1.8 4,646,111 + ybeZ NOLOHH_23610 0.39 -0.8 4,646,111 + ybeZ NOLOHH_23610 0.39 +0.5 4,646,111 + ybeZ NOLOHH_23610 0.39 +1.5 4,646,140 + ybeZ NOLOHH_23610 0.42 -1.3 4,646,140 + ybeZ NOLOHH_23610 0.42 -0.5 4,646,177 + ybeZ NOLOHH_23610 0.45 -0.4 4,646,177 + ybeZ NOLOHH_23610 0.45 +0.1 4,646,177 + ybeZ NOLOHH_23610 0.45 +0.7 4,646,292 + ybeZ NOLOHH_23610 0.56 +0.0 4,646,327 + ybeZ NOLOHH_23610 0.59 -0.0 4,646,411 + ybeZ NOLOHH_23610 0.67 +1.5 4,646,411 + ybeZ NOLOHH_23610 0.67 -0.7 4,646,411 + ybeZ NOLOHH_23610 0.67 -0.3 4,646,411 + ybeZ NOLOHH_23610 0.67 +0.1 4,646,411 + ybeZ NOLOHH_23610 0.67 +0.2 4,646,411 + ybeZ NOLOHH_23610 0.67 +1.5 4,646,411 + ybeZ NOLOHH_23610 0.67 +1.1 4,646,563 + ybeZ NOLOHH_23610 0.81 -0.4 4,646,569 + ybeZ NOLOHH_23610 0.81 +0.3 4,646,580 + ybeZ NOLOHH_23610 0.82 +0.3 4,646,580 + ybeZ NOLOHH_23610 0.82 -0.4 4,646,626 + ybeZ NOLOHH_23610 0.87 +0.3 4,647,214 + +2.3 4,647,214 + +0.5 4,647,214 + +0.8 4,647,300 + +1.1 4,647,300 + +1.2 4,647,300 + +0.3 4,647,300 + -0.8 4,647,300 + -1.1 4,647,698 + corC NOLOHH_23620 0.43 -2.7 4,647,767 + corC NOLOHH_23620 0.50 +0.7 4,647,909 + corC NOLOHH_23620 0.67 +0.2 4,647,909 + corC NOLOHH_23620 0.67 +0.4 4,648,091 + corC NOLOHH_23620 0.87 -0.3 4,648,142 + +0.9 4,648,142 + -0.0 4,648,145 + +0.5 4,648,145 + +0.5 4,648,200 + -0.5
Or see this region's nucleotide sequence