Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_22850 and NOLOHH_22855 are separated by 38 nucleotides NOLOHH_22855 and NOLOHH_22860 overlap by 4 nucleotides
NOLOHH_22850: NOLOHH_22850 - portal protein, at 4,512,246 to 4,514,336
_22850
NOLOHH_22855: NOLOHH_22855 - PBSX family phage terminase large subunit, at 4,514,375 to 4,515,787
_22855
NOLOHH_22860: NOLOHH_22860 - terminase small subunit, at 4,515,784 to 4,516,311
_22860
Position (kb)
4514
4515
4516 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4513.458 kb on - strand, within NOLOHH_22850 at 4513.515 kb on + strand, within NOLOHH_22850 at 4513.515 kb on + strand, within NOLOHH_22850 at 4513.515 kb on + strand, within NOLOHH_22850 at 4513.519 kb on + strand, within NOLOHH_22850 at 4513.519 kb on + strand, within NOLOHH_22850 at 4513.520 kb on - strand, within NOLOHH_22850 at 4513.520 kb on - strand, within NOLOHH_22850 at 4513.520 kb on - strand, within NOLOHH_22850 at 4513.520 kb on - strand, within NOLOHH_22850 at 4513.570 kb on - strand, within NOLOHH_22850 at 4513.589 kb on + strand, within NOLOHH_22850 at 4513.613 kb on - strand, within NOLOHH_22850 at 4513.696 kb on + strand, within NOLOHH_22850 at 4513.697 kb on - strand, within NOLOHH_22850 at 4513.697 kb on - strand, within NOLOHH_22850 at 4513.700 kb on + strand, within NOLOHH_22850 at 4513.700 kb on + strand, within NOLOHH_22850 at 4513.740 kb on - strand, within NOLOHH_22850 at 4513.740 kb on - strand, within NOLOHH_22850 at 4513.747 kb on - strand, within NOLOHH_22850 at 4513.747 kb on - strand, within NOLOHH_22850 at 4513.891 kb on + strand, within NOLOHH_22850 at 4513.892 kb on - strand, within NOLOHH_22850 at 4513.892 kb on - strand, within NOLOHH_22850 at 4513.892 kb on - strand, within NOLOHH_22850 at 4513.892 kb on - strand, within NOLOHH_22850 at 4513.910 kb on + strand, within NOLOHH_22850 at 4514.074 kb on - strand, within NOLOHH_22850 at 4514.216 kb on + strand at 4514.358 kb on + strand at 4514.362 kb on - strand at 4514.362 kb on - strand at 4514.400 kb on + strand at 4514.401 kb on - strand at 4514.401 kb on - strand at 4514.401 kb on - strand at 4514.440 kb on + strand at 4514.441 kb on - strand at 4514.441 kb on - strand at 4514.441 kb on - strand at 4514.637 kb on + strand, within NOLOHH_22855 at 4514.638 kb on - strand, within NOLOHH_22855 at 4514.661 kb on + strand, within NOLOHH_22855 at 4514.692 kb on - strand, within NOLOHH_22855 at 4514.695 kb on - strand, within NOLOHH_22855 at 4514.785 kb on - strand, within NOLOHH_22855 at 4514.910 kb on + strand, within NOLOHH_22855 at 4514.910 kb on + strand, within NOLOHH_22855 at 4514.998 kb on + strand, within NOLOHH_22855 at 4515.031 kb on + strand, within NOLOHH_22855 at 4515.046 kb on + strand, within NOLOHH_22855 at 4515.046 kb on + strand, within NOLOHH_22855 at 4515.192 kb on + strand, within NOLOHH_22855 at 4515.193 kb on - strand, within NOLOHH_22855 at 4515.268 kb on - strand, within NOLOHH_22855 at 4515.306 kb on - strand, within NOLOHH_22855 at 4515.321 kb on + strand, within NOLOHH_22855 at 4515.321 kb on + strand, within NOLOHH_22855 at 4515.322 kb on - strand, within NOLOHH_22855 at 4515.362 kb on + strand, within NOLOHH_22855 at 4515.469 kb on + strand, within NOLOHH_22855 at 4515.469 kb on + strand, within NOLOHH_22855 at 4515.498 kb on + strand, within NOLOHH_22855 at 4515.499 kb on - strand, within NOLOHH_22855 at 4515.581 kb on + strand, within NOLOHH_22855 at 4515.649 kb on + strand at 4515.649 kb on + strand at 4515.706 kb on + strand at 4515.707 kb on - strand at 4515.739 kb on - strand at 4515.739 kb on - strand at 4515.770 kb on - strand at 4515.873 kb on + strand, within NOLOHH_22860 at 4515.874 kb on - strand, within NOLOHH_22860 at 4515.925 kb on - strand, within NOLOHH_22860 at 4516.017 kb on + strand, within NOLOHH_22860 at 4516.092 kb on + strand, within NOLOHH_22860 at 4516.110 kb on - strand, within NOLOHH_22860 at 4516.122 kb on + strand, within NOLOHH_22860 at 4516.210 kb on - strand, within NOLOHH_22860 at 4516.316 kb on + strand at 4516.316 kb on + strand at 4516.325 kb on + strand at 4516.329 kb on + strand at 4516.329 kb on + strand at 4516.338 kb on + strand at 4516.339 kb on - strand at 4516.346 kb on + strand at 4516.399 kb on + strand at 4516.407 kb on + strand at 4516.407 kb on + strand at 4516.461 kb on + strand at 4516.591 kb on + strand at 4516.625 kb on + strand at 4516.637 kb on - strand at 4516.661 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 4,513,458 - NOLOHH_22850 0.58 +0.7 4,513,515 + NOLOHH_22850 0.61 +0.5 4,513,515 + NOLOHH_22850 0.61 -0.1 4,513,515 + NOLOHH_22850 0.61 -1.5 4,513,519 + NOLOHH_22850 0.61 -0.9 4,513,519 + NOLOHH_22850 0.61 +0.5 4,513,520 - NOLOHH_22850 0.61 +0.3 4,513,520 - NOLOHH_22850 0.61 +0.5 4,513,520 - NOLOHH_22850 0.61 +0.8 4,513,520 - NOLOHH_22850 0.61 +0.5 4,513,570 - NOLOHH_22850 0.63 -0.5 4,513,589 + NOLOHH_22850 0.64 -0.1 4,513,613 - NOLOHH_22850 0.65 -0.1 4,513,696 + NOLOHH_22850 0.69 +0.8 4,513,697 - NOLOHH_22850 0.69 -1.5 4,513,697 - NOLOHH_22850 0.69 -3.1 4,513,700 + NOLOHH_22850 0.70 -0.1 4,513,700 + NOLOHH_22850 0.70 -0.5 4,513,740 - NOLOHH_22850 0.71 -0.1 4,513,740 - NOLOHH_22850 0.71 -1.1 4,513,747 - NOLOHH_22850 0.72 +0.9 4,513,747 - NOLOHH_22850 0.72 +0.5 4,513,891 + NOLOHH_22850 0.79 +0.9 4,513,892 - NOLOHH_22850 0.79 -0.9 4,513,892 - NOLOHH_22850 0.79 -0.1 4,513,892 - NOLOHH_22850 0.79 -1.5 4,513,892 - NOLOHH_22850 0.79 -1.2 4,513,910 + NOLOHH_22850 0.80 +1.1 4,514,074 - NOLOHH_22850 0.87 +0.7 4,514,216 + -0.5 4,514,358 + -1.8 4,514,362 - -1.1 4,514,362 - -0.5 4,514,400 + +1.5 4,514,401 - -1.2 4,514,401 - -0.3 4,514,401 - -0.9 4,514,440 + +0.5 4,514,441 - +1.1 4,514,441 - -0.4 4,514,441 - -1.7 4,514,637 + NOLOHH_22855 0.19 -0.5 4,514,638 - NOLOHH_22855 0.19 -0.3 4,514,661 + NOLOHH_22855 0.20 -0.1 4,514,692 - NOLOHH_22855 0.22 -1.4 4,514,695 - NOLOHH_22855 0.23 +0.8 4,514,785 - NOLOHH_22855 0.29 +1.2 4,514,910 + NOLOHH_22855 0.38 +0.5 4,514,910 + NOLOHH_22855 0.38 -1.1 4,514,998 + NOLOHH_22855 0.44 -1.1 4,515,031 + NOLOHH_22855 0.46 +0.5 4,515,046 + NOLOHH_22855 0.47 +0.5 4,515,046 + NOLOHH_22855 0.47 -1.7 4,515,192 + NOLOHH_22855 0.58 +0.8 4,515,193 - NOLOHH_22855 0.58 -0.2 4,515,268 - NOLOHH_22855 0.63 -2.1 4,515,306 - NOLOHH_22855 0.66 -1.5 4,515,321 + NOLOHH_22855 0.67 +0.5 4,515,321 + NOLOHH_22855 0.67 +0.3 4,515,322 - NOLOHH_22855 0.67 -1.7 4,515,362 + NOLOHH_22855 0.70 -0.1 4,515,469 + NOLOHH_22855 0.77 +1.5 4,515,469 + NOLOHH_22855 0.77 +2.3 4,515,498 + NOLOHH_22855 0.79 +1.5 4,515,499 - NOLOHH_22855 0.80 +0.5 4,515,581 + NOLOHH_22855 0.85 -0.1 4,515,649 + +0.5 4,515,649 + -0.6 4,515,706 + -0.1 4,515,707 - -1.1 4,515,739 - +0.3 4,515,739 - -0.7 4,515,770 - -0.2 4,515,873 + NOLOHH_22860 0.17 +2.1 4,515,874 - NOLOHH_22860 0.17 -1.7 4,515,925 - NOLOHH_22860 0.27 -0.1 4,516,017 + NOLOHH_22860 0.44 +0.1 4,516,092 + NOLOHH_22860 0.58 -0.3 4,516,110 - NOLOHH_22860 0.62 +0.5 4,516,122 + NOLOHH_22860 0.64 +0.3 4,516,210 - NOLOHH_22860 0.81 +0.2 4,516,316 + -2.5 4,516,316 + -2.1 4,516,325 + -0.7 4,516,329 + +0.0 4,516,329 + -0.3 4,516,338 + +0.5 4,516,339 - +2.1 4,516,346 + +1.1 4,516,399 + -0.8 4,516,407 + -0.9 4,516,407 + -0.3 4,516,461 + -0.4 4,516,591 + -1.1 4,516,625 + -0.5 4,516,637 - -0.5 4,516,661 - -1.8
Or see this region's nucleotide sequence