Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_16070 and NOLOHH_16075 overlap by 4 nucleotides NOLOHH_16075 and NOLOHH_16080 are separated by 419 nucleotides
NOLOHH_16070: NOLOHH_16070 - ATP-binding protein, at 3,158,506 to 3,160,797
_16070
NOLOHH_16075: NOLOHH_16075 - HNH endonuclease, at 3,160,794 to 3,161,720
_16075
NOLOHH_16080: NOLOHH_16080 - hypothetical protein, at 3,162,140 to 3,165,868
_16080
Position (kb)
3160
3161
3162 Strain fitness (log2 ratio)
-1
0
1
2 at 3159.830 kb on + strand, within NOLOHH_16070 at 3159.856 kb on + strand, within NOLOHH_16070 at 3159.858 kb on + strand, within NOLOHH_16070 at 3159.877 kb on + strand, within NOLOHH_16070 at 3159.879 kb on + strand, within NOLOHH_16070 at 3159.879 kb on + strand, within NOLOHH_16070 at 3159.879 kb on + strand, within NOLOHH_16070 at 3159.879 kb on + strand, within NOLOHH_16070 at 3159.879 kb on + strand, within NOLOHH_16070 at 3159.882 kb on + strand, within NOLOHH_16070 at 3159.882 kb on + strand, within NOLOHH_16070 at 3159.920 kb on + strand, within NOLOHH_16070 at 3159.957 kb on + strand, within NOLOHH_16070 at 3160.060 kb on - strand, within NOLOHH_16070 at 3160.223 kb on + strand, within NOLOHH_16070 at 3160.223 kb on + strand, within NOLOHH_16070 at 3160.224 kb on - strand, within NOLOHH_16070 at 3160.351 kb on + strand, within NOLOHH_16070 at 3160.351 kb on + strand, within NOLOHH_16070 at 3160.351 kb on + strand, within NOLOHH_16070 at 3160.351 kb on + strand, within NOLOHH_16070 at 3160.351 kb on + strand, within NOLOHH_16070 at 3160.351 kb on + strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.352 kb on - strand, within NOLOHH_16070 at 3160.380 kb on + strand, within NOLOHH_16070 at 3160.380 kb on + strand, within NOLOHH_16070 at 3160.381 kb on - strand, within NOLOHH_16070 at 3160.700 kb on + strand at 3160.891 kb on - strand, within NOLOHH_16075 at 3160.948 kb on + strand, within NOLOHH_16075 at 3161.175 kb on - strand, within NOLOHH_16075 at 3161.265 kb on - strand, within NOLOHH_16075 at 3161.313 kb on - strand, within NOLOHH_16075 at 3161.375 kb on + strand, within NOLOHH_16075 at 3161.391 kb on - strand, within NOLOHH_16075 at 3161.427 kb on - strand, within NOLOHH_16075 at 3161.459 kb on - strand, within NOLOHH_16075 at 3161.483 kb on - strand, within NOLOHH_16075 at 3161.531 kb on + strand, within NOLOHH_16075 at 3161.744 kb on - strand at 3161.744 kb on - strand at 3161.822 kb on - strand at 3161.844 kb on - strand at 3162.194 kb on - strand at 3162.518 kb on + strand, within NOLOHH_16080
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 3,159,830 + NOLOHH_16070 0.58 +1.5 3,159,856 + NOLOHH_16070 0.59 -0.1 3,159,858 + NOLOHH_16070 0.59 +0.3 3,159,877 + NOLOHH_16070 0.60 +0.9 3,159,879 + NOLOHH_16070 0.60 +0.3 3,159,879 + NOLOHH_16070 0.60 +0.3 3,159,879 + NOLOHH_16070 0.60 +1.6 3,159,879 + NOLOHH_16070 0.60 -0.7 3,159,879 + NOLOHH_16070 0.60 -1.7 3,159,882 + NOLOHH_16070 0.60 +1.0 3,159,882 + NOLOHH_16070 0.60 +2.3 3,159,920 + NOLOHH_16070 0.62 +0.5 3,159,957 + NOLOHH_16070 0.63 -0.4 3,160,060 - NOLOHH_16070 0.68 -0.7 3,160,223 + NOLOHH_16070 0.75 -0.7 3,160,223 + NOLOHH_16070 0.75 +0.0 3,160,224 - NOLOHH_16070 0.75 -0.7 3,160,351 + NOLOHH_16070 0.80 +1.3 3,160,351 + NOLOHH_16070 0.80 +1.0 3,160,351 + NOLOHH_16070 0.80 +0.0 3,160,351 + NOLOHH_16070 0.80 +1.0 3,160,351 + NOLOHH_16070 0.80 +0.3 3,160,351 + NOLOHH_16070 0.80 +1.1 3,160,352 - NOLOHH_16070 0.81 -0.7 3,160,352 - NOLOHH_16070 0.81 +0.3 3,160,352 - NOLOHH_16070 0.81 -0.3 3,160,352 - NOLOHH_16070 0.81 +1.1 3,160,352 - NOLOHH_16070 0.81 -0.7 3,160,352 - NOLOHH_16070 0.81 -1.1 3,160,352 - NOLOHH_16070 0.81 +1.3 3,160,352 - NOLOHH_16070 0.81 -0.7 3,160,380 + NOLOHH_16070 0.82 +0.7 3,160,380 + NOLOHH_16070 0.82 +0.7 3,160,381 - NOLOHH_16070 0.82 +1.3 3,160,700 + +0.7 3,160,891 - NOLOHH_16075 0.10 -1.3 3,160,948 + NOLOHH_16075 0.17 +0.3 3,161,175 - NOLOHH_16075 0.41 -0.7 3,161,265 - NOLOHH_16075 0.51 +1.9 3,161,313 - NOLOHH_16075 0.56 +0.3 3,161,375 + NOLOHH_16075 0.63 -0.2 3,161,391 - NOLOHH_16075 0.64 +0.3 3,161,427 - NOLOHH_16075 0.68 +0.3 3,161,459 - NOLOHH_16075 0.72 -0.0 3,161,483 - NOLOHH_16075 0.74 +1.3 3,161,531 + NOLOHH_16075 0.80 -0.7 3,161,744 - +0.3 3,161,744 - +0.3 3,161,822 - -1.5 3,161,844 - +1.3 3,162,194 - -0.7 3,162,518 + NOLOHH_16080 0.10 +0.3
Or see this region's nucleotide sequence