Strain Fitness in Escherichia coli ECOR27 around NOLOHH_15345

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
3,017,631	+				+1.2
3,017,791	+	rcnB	NOLOHH_15340	0.21	+2.7
3,017,805	-	rcnB	NOLOHH_15340	0.25	-0.8
3,017,807	-	rcnB	NOLOHH_15340	0.25	+1.9
3,017,807	-	rcnB	NOLOHH_15340	0.25	+0.3
3,017,807	-	rcnB	NOLOHH_15340	0.25	+0.9
3,017,807	-	rcnB	NOLOHH_15340	0.25	-0.7
3,017,807	-	rcnB	NOLOHH_15340	0.25	+0.3
3,017,844	-	rcnB	NOLOHH_15340	0.36	+0.3
3,017,847	+	rcnB	NOLOHH_15340	0.37	+1.9
3,017,848	-	rcnB	NOLOHH_15340	0.37	-0.4
3,017,848	-	rcnB	NOLOHH_15340	0.37	-0.5
3,017,885	-	rcnB	NOLOHH_15340	0.48	+0.5
3,017,951	-	rcnB	NOLOHH_15340	0.68	+0.3
3,018,045	-				+1.6
3,018,084	-				-1.2
3,018,084	-				+1.3
3,018,087	-				+1.2
3,018,116	+				-0.7
3,018,117	-				-2.0
3,018,117	-				+1.2
3,018,221	+				+0.3
3,018,222	-				+0.0
3,018,306	-				-0.1
3,018,306	-				-0.6
3,018,315	+				-0.1
3,018,315	+				+2.4
3,018,315	+				-0.6
3,018,315	+				+0.9
3,018,315	+				-0.5
3,018,316	-				+1.0
3,018,316	-				-0.2
3,018,316	-				+1.1
3,018,316	-				+0.8
3,018,316	-				+0.6
3,018,316	-				+0.4
3,018,326	+				-0.4
3,018,377	-	rcnA	NOLOHH_15345	0.12	+1.4
3,018,529	+	rcnA	NOLOHH_15345	0.30	-1.2
3,018,735	+	rcnA	NOLOHH_15345	0.55	-0.6
3,018,778	+	rcnA	NOLOHH_15345	0.61	-0.6
3,018,922	+	rcnA	NOLOHH_15345	0.78	-0.1
3,018,922	+	rcnA	NOLOHH_15345	0.78	-0.6
3,018,955	+	rcnA	NOLOHH_15345	0.82	+0.7
3,019,037	+				-1.0
3,019,037	+				-1.0
3,019,038	-				+0.2
3,019,038	-				+0.8
3,019,038	-				+0.8
3,019,115	+				-0.2
3,019,116	-				-1.0
3,019,122	-				-0.6
3,019,154	-				+0.0
3,019,182	-				-1.5
3,019,393	+	rcnR	NOLOHH_15350	0.62	+0.4
3,019,393	+	rcnR	NOLOHH_15350	0.62	+0.4
3,019,437	+	rcnR	NOLOHH_15350	0.78	-2.8
3,019,484	+				+1.4
3,019,484	+				-0.2
3,019,798	-				-0.2
3,019,831	-				+1.4
3,019,976	-		NOLOHH_15355	0.16	+0.1
3,020,087	+		NOLOHH_15355	0.25	+0.9
3,020,088	-		NOLOHH_15355	0.25	-0.6
3,020,090	+		NOLOHH_15355	0.25	-0.9
3,020,090	+		NOLOHH_15355	0.25	-0.2