Strain Fitness in Escherichia coli ECOR27 around NOLOHH_15170

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
2,975,882	+	mdtQ	NOLOHH_15165	0.35	-0.2
2,976,002	-	mdtQ	NOLOHH_15165	0.43	+0.4
2,976,044	-	mdtQ	NOLOHH_15165	0.46	+0.4
2,976,046	-	mdtQ	NOLOHH_15165	0.46	-0.6
2,976,046	-	mdtQ	NOLOHH_15165	0.46	+1.7
2,976,059	+	mdtQ	NOLOHH_15165	0.47	+1.4
2,976,060	-	mdtQ	NOLOHH_15165	0.47	-0.6
2,976,060	-	mdtQ	NOLOHH_15165	0.47	-0.9
2,976,060	-	mdtQ	NOLOHH_15165	0.47	+2.4
2,976,092	+	mdtQ	NOLOHH_15165	0.50	+0.4
2,976,092	+	mdtQ	NOLOHH_15165	0.50	+1.0
2,976,200	+	mdtQ	NOLOHH_15165	0.57	+0.6
2,976,297	+	mdtQ	NOLOHH_15165	0.64	+1.4
2,976,394	+	mdtQ	NOLOHH_15165	0.71	-0.9
2,976,519	-	mdtQ	NOLOHH_15165	0.79	-0.6
2,976,528	+	mdtQ	NOLOHH_15165	0.80	+0.4
2,976,528	+	mdtQ	NOLOHH_15165	0.80	-1.6
2,976,646	+	mdtQ	NOLOHH_15165	0.88	+0.4
2,976,646	+	mdtQ	NOLOHH_15165	0.88	+1.1
2,976,830	+				+2.0
2,976,830	+				+0.9
2,976,831	-				-0.4
2,976,832	+				+0.7
2,976,832	+				-1.9
2,976,833	-				+2.4
2,976,836	+				+0.7
2,976,844	-				+1.4
2,976,844	-				-1.2
2,976,853	+				+1.0
2,976,854	-				-0.6
2,977,007	+	yohF	NOLOHH_15170	0.18	+1.0
2,977,007	+	yohF	NOLOHH_15170	0.18	-0.1
2,977,008	-	yohF	NOLOHH_15170	0.18	+0.4
2,977,008	-	yohF	NOLOHH_15170	0.18	+1.4
2,977,022	+	yohF	NOLOHH_15170	0.20	+0.4
2,977,281	+	yohF	NOLOHH_15170	0.54	+0.5
2,977,281	+	yohF	NOLOHH_15170	0.54	+0.4
2,977,281	+	yohF	NOLOHH_15170	0.54	-1.7
2,977,281	+	yohF	NOLOHH_15170	0.54	-0.0
2,977,281	+	yohF	NOLOHH_15170	0.54	-1.2
2,977,282	-	yohF	NOLOHH_15170	0.54	-0.2
2,977,282	-	yohF	NOLOHH_15170	0.54	+0.4
2,977,289	+	yohF	NOLOHH_15170	0.55	-0.5
2,977,290	-	yohF	NOLOHH_15170	0.55	+2.0
2,977,299	+	yohF	NOLOHH_15170	0.57	-0.6
2,977,300	-	yohF	NOLOHH_15170	0.57	-1.2
2,977,389	+	yohF	NOLOHH_15170	0.68	-0.8
2,977,452	+	yohF	NOLOHH_15170	0.77	+2.7
2,977,452	+	yohF	NOLOHH_15170	0.77	-0.4
2,977,452	+	yohF	NOLOHH_15170	0.77	-0.9
2,977,452	+	yohF	NOLOHH_15170	0.77	+0.4
2,977,456	+	yohF	NOLOHH_15170	0.77	-0.2
2,977,457	-	yohF	NOLOHH_15170	0.77	-0.4
2,977,457	-	yohF	NOLOHH_15170	0.77	-1.2
2,977,558	+				+1.4
2,977,580	+				-1.2
2,977,596	+				-1.2
2,977,597	-				+1.0
2,977,680	+				+1.6
2,978,031	-	yohD	NOLOHH_15175	0.47	-1.6
2,978,034	+	yohD	NOLOHH_15175	0.47	-0.2
2,978,034	+	yohD	NOLOHH_15175	0.47	+0.4
2,978,035	-	yohD	NOLOHH_15175	0.48	+1.0
2,978,035	-	yohD	NOLOHH_15175	0.48	-0.3
2,978,035	-	yohD	NOLOHH_15175	0.48	-0.6
2,978,035	-	yohD	NOLOHH_15175	0.48	-0.4
2,978,204	-	yohD	NOLOHH_15175	0.77	+0.1
2,978,222	-	yohD	NOLOHH_15175	0.80	+0.4
2,978,309	+				-0.6
2,978,310	-				-0.0
2,978,310	-				+0.7
2,978,310	-				-1.6
2,978,319	+				+0.4
2,978,319	+				-0.6
2,978,319	+				+1.0
2,978,320	-				-0.4
2,978,320	-				-1.6
2,978,373	+				-0.2
2,978,373	+				-0.4
2,978,373	+				-0.2
2,978,373	+				+0.1
2,978,373	+				-1.0
2,978,374	-				+0.4
2,978,374	-				+1.2
2,978,374	-				+2.4
2,978,462	+				+0.4
2,978,463	-				+0.6
2,978,463	-				+1.0
2,978,463	-				+1.0
2,978,464	+				+2.0
2,978,464	+				+0.5
2,978,561	-				-0.1
2,978,591	+	yohC	NOLOHH_15180	0.14	+1.8
2,978,591	+	yohC	NOLOHH_15180	0.14	-0.6