Strain Fitness in Escherichia coli ECOR27 around NOLOHH_14140

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
2,749,498	+	dsdA	NOLOHH_14130	0.74	-0.4
2,749,499	-	dsdA	NOLOHH_14130	0.74	+0.9
2,749,499	-	dsdA	NOLOHH_14130	0.74	-0.2
2,749,565	+	dsdA	NOLOHH_14130	0.79	+0.4
2,749,591	-	dsdA	NOLOHH_14130	0.81	-2.0
2,749,727	+				+0.6
2,749,727	+				-0.6
2,749,727	+				+0.4
2,749,728	-				+2.4
2,749,728	-				-0.6
2,749,802	-				+2.4
2,749,836	+				+3.2
2,749,851	+				-1.4
2,749,851	+				-0.6
2,749,851	+				+0.9
2,749,852	-				-0.4
2,749,852	-				-1.2
2,749,867	+				-2.6
2,749,868	-				+0.5
2,749,868	-				+2.2
2,749,868	-				+1.4
2,749,868	-				-0.7
2,749,874	+				-0.8
2,749,920	-	dsdX	NOLOHH_14135	0.25	+0.4
2,749,935	-	dsdX	NOLOHH_14135	0.32	+0.2
2,749,935	-	dsdX	NOLOHH_14135	0.32	-0.2
2,749,937	-	dsdX	NOLOHH_14135	0.32	-1.1
2,749,939	+	dsdX	NOLOHH_14135	0.33	+0.4
2,749,940	-	dsdX	NOLOHH_14135	0.34	+0.1
2,749,943	+	dsdX	NOLOHH_14135	0.35	+0.4
2,749,944	-	dsdX	NOLOHH_14135	0.36	+0.8
2,749,944	-	dsdX	NOLOHH_14135	0.36	-1.8
2,750,049	-	dsdX	NOLOHH_14135	0.84	-0.1
2,750,094	+				+0.1
2,750,140	+				-0.5
2,750,141	-				-1.0
2,750,144	+				-1.5
2,750,145	-				+1.0
2,750,152	+				+0.4
2,750,152	+				+0.9
2,750,153	-				-0.6
2,750,153	-				-0.4
2,750,153	-				-0.3
2,750,153	-				+0.2
2,750,153	-				+1.9
2,750,153	-				+0.2
2,750,153	-				-0.5
2,750,155	-				+1.9
2,750,155	-				-0.5
2,750,155	-				+0.4
2,750,210	-				-0.6
2,750,222	+				+0.6
2,750,223	-				-0.6
2,750,223	-				+0.0
2,750,227	+				-0.1
2,750,227	+				-1.6
2,750,227	+				+0.8
2,750,227	+				-0.8
2,750,227	+				+1.4
2,750,228	-				-0.6
2,750,228	-				+0.4
2,750,228	-				+0.4
2,750,228	-				+0.9
2,750,282	+				+0.4
2,750,325	+				-0.6
2,750,383	+				-1.2
2,750,383	+				+0.4
2,750,384	-				+0.9
2,750,447	+				-0.7
2,750,447	+				-0.2
2,750,448	-				+0.9
2,750,612	-	purR	NOLOHH_14140	0.27	-1.2
2,750,677	+	purR	NOLOHH_14140	0.34	-2.2
2,750,677	+	purR	NOLOHH_14140	0.34	-0.2
2,750,678	-	purR	NOLOHH_14140	0.34	-0.2
2,750,681	+	purR	NOLOHH_14140	0.34	+0.8
2,750,681	+	purR	NOLOHH_14140	0.34	-0.1
2,750,681	+	purR	NOLOHH_14140	0.34	+0.2
2,750,681	+	purR	NOLOHH_14140	0.34	+0.3
2,750,681	+	purR	NOLOHH_14140	0.34	+0.8
2,750,681	+	purR	NOLOHH_14140	0.34	+1.9
2,750,682	-	purR	NOLOHH_14140	0.34	-1.2
2,750,682	-	purR	NOLOHH_14140	0.34	+0.1
2,750,686	+	purR	NOLOHH_14140	0.34	+1.3
2,750,686	+	purR	NOLOHH_14140	0.34	+1.2
2,750,686	+	purR	NOLOHH_14140	0.34	+0.8
2,750,686	+	purR	NOLOHH_14140	0.34	+0.1
2,750,686	+	purR	NOLOHH_14140	0.34	+0.3
2,750,686	+	purR	NOLOHH_14140	0.34	+0.1
2,750,687	-	purR	NOLOHH_14140	0.35	+0.3
2,750,687	-	purR	NOLOHH_14140	0.35	+0.3
2,750,726	+	purR	NOLOHH_14140	0.39	+0.5
2,750,727	-	purR	NOLOHH_14140	0.39	-0.7
2,750,742	+	purR	NOLOHH_14140	0.40	-2.5
2,750,783	+	purR	NOLOHH_14140	0.45	-1.2
2,750,783	+	purR	NOLOHH_14140	0.45	-0.3
2,750,784	-	purR	NOLOHH_14140	0.45	+0.9
2,750,785	+	purR	NOLOHH_14140	0.45	+0.3
2,750,798	+	purR	NOLOHH_14140	0.46	-0.5
2,750,798	+	purR	NOLOHH_14140	0.46	+1.3
2,750,798	+	purR	NOLOHH_14140	0.46	-0.0
2,750,798	+	purR	NOLOHH_14140	0.46	+2.7
2,750,798	+	purR	NOLOHH_14140	0.46	-1.8
2,750,987	+	purR	NOLOHH_14140	0.66	+0.3
2,751,086	+	purR	NOLOHH_14140	0.76	-0.7
2,751,135	+	purR	NOLOHH_14140	0.82	+1.1
2,751,239	-				+0.1
2,751,314	+				-0.2
2,751,314	+				-0.9
2,751,315	-				-2.0
2,751,315	-				+0.3
2,751,373	+				+0.8
2,751,373	+				-2.1
2,751,416	+				-1.2
2,751,417	-				-0.4
2,751,448	-				+1.0
2,751,470	+	cscA	NOLOHH_14145	0.11	-1.2
2,751,475	-	cscA	NOLOHH_14145	0.11	-0.4
2,751,475	-	cscA	NOLOHH_14145	0.11	-0.1
2,751,515	+	cscA	NOLOHH_14145	0.14	-3.1
2,751,528	+	cscA	NOLOHH_14145	0.15	-0.3
2,751,584	+	cscA	NOLOHH_14145	0.19	+0.4
2,751,586	+	cscA	NOLOHH_14145	0.19	-0.1
2,751,587	-	cscA	NOLOHH_14145	0.19	-1.2
2,751,695	-	cscA	NOLOHH_14145	0.26	-0.6
2,751,698	+	cscA	NOLOHH_14145	0.26	-0.2
2,751,699	-	cscA	NOLOHH_14145	0.27	-0.4
2,751,771	+	cscA	NOLOHH_14145	0.32	+0.4
2,751,795	+	cscA	NOLOHH_14145	0.33	-1.2
2,751,864	-	cscA	NOLOHH_14145	0.38	+0.7
2,751,885	-	cscA	NOLOHH_14145	0.40	-0.6
2,751,950	+	cscA	NOLOHH_14145	0.44	-0.1
2,751,950	+	cscA	NOLOHH_14145	0.44	+1.4
2,752,003	-	cscA	NOLOHH_14145	0.48	-0.2
2,752,003	-	cscA	NOLOHH_14145	0.48	+0.6
2,752,003	-	cscA	NOLOHH_14145	0.48	+1.1
2,752,073	-	cscA	NOLOHH_14145	0.53	-1.2
2,752,116	-	cscA	NOLOHH_14145	0.56	-1.2
2,752,116	-	cscA	NOLOHH_14145	0.56	-1.6
2,752,116	-	cscA	NOLOHH_14145	0.56	+1.9
2,752,117	+	cscA	NOLOHH_14145	0.56	-0.2
2,752,117	+	cscA	NOLOHH_14145	0.56	+1.4
2,752,118	-	cscA	NOLOHH_14145	0.56	-2.6
2,752,118	-	cscA	NOLOHH_14145	0.56	-0.6
2,752,118	-	cscA	NOLOHH_14145	0.56	+1.4
2,752,265	+	cscA	NOLOHH_14145	0.66	+0.2