Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13605

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
2,641,051	+				-0.2
2,641,052	-				+0.3
2,641,052	-				-0.2
2,641,079	+				+0.2
2,641,079	+				+1.5
2,641,115	+				-0.2
2,641,162	+				+1.5
2,641,162	+				+0.0
2,641,163	-				-1.0
2,641,163	-				-0.1
2,641,163	-				-0.7
2,641,163	-				-2.5
2,641,194	-				+0.1
2,641,197	-				-0.8
2,641,212	-				-1.2
2,641,212	-				-0.4
2,641,255	+	vapB	NOLOHH_13595	0.18	+0.3
2,641,260	+	vapB	NOLOHH_13595	0.19	-1.7
2,641,261	-	vapB	NOLOHH_13595	0.20	-0.2
2,641,267	-	vapB	NOLOHH_13595	0.22	+0.7
2,641,270	+	vapB	NOLOHH_13595	0.23	+0.0
2,641,270	+	vapB	NOLOHH_13595	0.23	-0.7
2,641,271	-	vapB	NOLOHH_13595	0.24	+0.3
2,641,500	+				+0.8
2,641,515	+	vapC	NOLOHH_13600	0.10	-0.8
2,641,519	-	vapC	NOLOHH_13600	0.11	+1.4
2,641,532	+	vapC	NOLOHH_13600	0.15	+0.4
2,641,532	+	vapC	NOLOHH_13600	0.15	-0.2
2,641,532	+	vapC	NOLOHH_13600	0.15	-0.6
2,641,533	-	vapC	NOLOHH_13600	0.15	+0.4
2,641,575	+	vapC	NOLOHH_13600	0.25	-0.6
2,641,575	+	vapC	NOLOHH_13600	0.25	+0.2
2,641,575	+	vapC	NOLOHH_13600	0.25	-0.5
2,641,577	+	vapC	NOLOHH_13600	0.26	-0.2
2,641,606	+	vapC	NOLOHH_13600	0.33	-2.0
2,641,687	+	vapC	NOLOHH_13600	0.53	-0.6
2,641,687	+	vapC	NOLOHH_13600	0.53	-1.2
2,641,870	+				+1.4
2,641,884	-				+0.8
2,641,906	-				+0.1
2,641,908	-				-1.1
2,641,908	-				+1.4
2,641,960	+				-0.6
2,641,960	+				+0.4
2,641,980	+				+0.4
2,641,980	+				+0.4
2,641,992	+				+0.8
2,641,994	+				-0.9
2,642,001	+				-0.2
2,642,001	+				-0.5
2,642,003	+				-0.3
2,642,004	-				-0.6
2,642,004	-				+0.4
2,642,014	+				-0.6
2,642,014	+				-0.5
2,642,015	-				-1.2
2,642,018	+				+1.6
2,642,018	+				-0.4
2,642,018	+				-0.5
2,642,019	-				-1.2
2,642,019	-				-1.6
2,642,143	+	ypfJ	NOLOHH_13605	0.14	+0.7
2,642,167	-	ypfJ	NOLOHH_13605	0.17	+2.4
2,642,167	-	ypfJ	NOLOHH_13605	0.17	+1.4
2,642,331	+	ypfJ	NOLOHH_13605	0.36	-0.5
2,642,332	-	ypfJ	NOLOHH_13605	0.36	+0.7
2,642,355	+	ypfJ	NOLOHH_13605	0.39	+0.0
2,642,355	+	ypfJ	NOLOHH_13605	0.39	+0.8
2,642,356	-	ypfJ	NOLOHH_13605	0.39	+0.4
2,642,356	-	ypfJ	NOLOHH_13605	0.39	+1.1
2,642,356	-	ypfJ	NOLOHH_13605	0.39	+0.0
2,642,356	-	ypfJ	NOLOHH_13605	0.39	-0.9
2,642,413	-	ypfJ	NOLOHH_13605	0.46	-1.2
2,642,436	+	ypfJ	NOLOHH_13605	0.48	+1.9
2,642,437	-	ypfJ	NOLOHH_13605	0.48	+1.0
2,642,437	-	ypfJ	NOLOHH_13605	0.48	+0.4
2,642,437	-	ypfJ	NOLOHH_13605	0.48	+0.4
2,642,454	+	ypfJ	NOLOHH_13605	0.50	-1.2
2,642,454	+	ypfJ	NOLOHH_13605	0.50	+0.8
2,642,454	+	ypfJ	NOLOHH_13605	0.50	+1.1
2,642,454	+	ypfJ	NOLOHH_13605	0.50	-1.1
2,642,455	-	ypfJ	NOLOHH_13605	0.50	-1.0
2,642,455	-	ypfJ	NOLOHH_13605	0.50	+0.4
2,642,455	-	ypfJ	NOLOHH_13605	0.50	+0.1
2,642,455	-	ypfJ	NOLOHH_13605	0.50	+0.4
2,642,455	-	ypfJ	NOLOHH_13605	0.50	+0.4
2,642,505	+	ypfJ	NOLOHH_13605	0.56	-1.4
2,642,505	+	ypfJ	NOLOHH_13605	0.56	-0.6
2,642,548	+	ypfJ	NOLOHH_13605	0.61	-0.9
2,642,611	+	ypfJ	NOLOHH_13605	0.69	-1.6
2,642,611	+	ypfJ	NOLOHH_13605	0.69	-0.6
2,642,663	+	ypfJ	NOLOHH_13605	0.75	+0.4
2,642,663	+	ypfJ	NOLOHH_13605	0.75	+0.4
2,642,663	+	ypfJ	NOLOHH_13605	0.75	-0.9
2,642,663	+	ypfJ	NOLOHH_13605	0.75	+0.4
2,642,663	+	ypfJ	NOLOHH_13605	0.75	-1.2
2,642,663	+	ypfJ	NOLOHH_13605	0.75	-0.9
2,642,663	+	ypfJ	NOLOHH_13605	0.75	-1.6
2,642,664	-	ypfJ	NOLOHH_13605	0.75	-0.1
2,642,664	-	ypfJ	NOLOHH_13605	0.75	+1.4
2,642,664	-	ypfJ	NOLOHH_13605	0.75	-0.5
2,642,664	-	ypfJ	NOLOHH_13605	0.75	+0.4
2,642,664	-	ypfJ	NOLOHH_13605	0.75	+0.4
2,642,666	+	ypfJ	NOLOHH_13605	0.75	+0.5
2,642,666	+	ypfJ	NOLOHH_13605	0.75	+0.7
2,642,667	-	ypfJ	NOLOHH_13605	0.75	-1.0
2,642,667	-	ypfJ	NOLOHH_13605	0.75	+0.4
2,642,746	+	ypfJ	NOLOHH_13605	0.84	+0.6
2,642,747	-	ypfJ	NOLOHH_13605	0.84	+0.4
2,642,770	+	ypfJ	NOLOHH_13605	0.87	+0.1
2,642,822	+				-0.6
2,642,861	+				+0.4
2,642,861	+				-0.6
2,642,861	+				-1.0
2,642,862	-				+0.4
2,642,880	+				+0.9
2,642,880	+				+1.0
2,642,926	-				+0.4
2,643,007	+				-0.6
2,643,024	+				+2.4
2,643,024	+				-0.1
2,643,090	+				+1.9
2,643,090	+				+0.3
2,643,091	-				-0.4
2,643,099	+	tmcA	NOLOHH_13610	0.10	-0.8
2,643,321	+	tmcA	NOLOHH_13610	0.21	+1.4
2,643,322	-	tmcA	NOLOHH_13610	0.21	+0.9
2,643,343	+	tmcA	NOLOHH_13610	0.22	+1.7
2,643,448	-	tmcA	NOLOHH_13610	0.27	-0.6
2,643,456	+	tmcA	NOLOHH_13610	0.28	+1.4
2,643,456	+	tmcA	NOLOHH_13610	0.28	-0.4
2,643,591	+	tmcA	NOLOHH_13610	0.34	-1.2
2,643,768	-	tmcA	NOLOHH_13610	0.43	+0.4
2,643,822	+	tmcA	NOLOHH_13610	0.46	+0.4
2,643,823	-	tmcA	NOLOHH_13610	0.46	+0.1