Strain Fitness in Escherichia coli ECOR27 around NOLOHH_10000

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
1,925,031	+	yhbS	NOLOHH_09985	0.55	+1.3
1,925,064	+	yhbS	NOLOHH_09985	0.62	-1.5
1,925,100	+	yhbS	NOLOHH_09985	0.69	-0.3
1,925,101	-	yhbS	NOLOHH_09985	0.69	+0.2
1,925,179	+	yhbS	NOLOHH_09985	0.85	-0.4
1,925,253	+				-0.9
1,925,344	-	yhbQ	NOLOHH_09990	0.34	-0.9
1,925,495	+	yhbQ	NOLOHH_09990	0.83	-1.1
1,925,496	-	yhbQ	NOLOHH_09990	0.84	+0.8
1,925,496	-	yhbQ	NOLOHH_09990	0.84	+0.5
1,925,525	+				+0.2
1,925,526	-				-0.2
1,925,561	+				+0.1
1,925,578	+				-0.2
1,925,578	+				-1.1
1,925,578	+				-0.3
1,925,579	-				+0.4
1,925,579	-				+0.1
1,925,580	+				+0.2
1,925,580	+				-0.3
1,925,694	+	yhbP	NOLOHH_09995	0.22	-1.1
1,925,695	-	yhbP	NOLOHH_09995	0.23	+0.9
1,925,724	+	yhbP	NOLOHH_09995	0.29	-0.0
1,925,725	-	yhbP	NOLOHH_09995	0.29	-1.3
1,925,725	-	yhbP	NOLOHH_09995	0.29	-0.6
1,925,725	-	yhbP	NOLOHH_09995	0.29	+0.2
1,925,794	+	yhbP	NOLOHH_09995	0.45	+1.1
1,925,821	+	yhbP	NOLOHH_09995	0.51	-0.1
1,925,821	+	yhbP	NOLOHH_09995	0.51	+0.2
1,925,822	-	yhbP	NOLOHH_09995	0.51	+2.1
1,925,841	-	yhbP	NOLOHH_09995	0.55	-1.1
1,925,895	+	yhbP	NOLOHH_09995	0.68	-1.1
1,925,896	-	yhbP	NOLOHH_09995	0.68	-0.4
1,925,896	-	yhbP	NOLOHH_09995	0.68	-0.4
1,926,152	+	yhbO	NOLOHH_10000	0.26	+0.2
1,926,152	+	yhbO	NOLOHH_10000	0.26	+0.9
1,926,165	-	yhbO	NOLOHH_10000	0.28	-0.8
1,926,251	+	yhbO	NOLOHH_10000	0.45	-1.2
1,926,301	+	yhbO	NOLOHH_10000	0.55	-0.7
1,926,371	+	yhbO	NOLOHH_10000	0.68	-0.6
1,926,483	-	yhbO	NOLOHH_10000	0.90	-1.1
1,926,483	-	yhbO	NOLOHH_10000	0.90	-0.2
1,926,530	+				-2.8
1,926,589	-				-0.5
1,926,592	+				+0.5
1,926,592	+				-2.8
1,926,592	+				-0.2
1,926,592	+				+0.9
1,926,592	+				+0.4
1,926,592	+				+0.0
1,926,592	+				+0.4
1,926,593	-				-0.9
1,926,593	-				-0.6
1,926,593	-				+0.1
1,926,593	-				-0.4
1,926,593	-				+0.8
1,926,604	+				+1.1
1,926,604	+				-0.6
1,926,604	+				+0.3
1,926,605	-				+0.8
1,926,605	-				-0.5
1,926,605	-				+1.4
1,926,607	+				-1.1
1,926,607	+				+0.5
1,926,608	-				-0.8
1,926,978	+	yraR	NOLOHH_10005	0.49	-0.6
1,926,978	+	yraR	NOLOHH_10005	0.49	+0.2
1,926,979	-	yraR	NOLOHH_10005	0.50	+0.4
1,927,027	+	yraR	NOLOHH_10005	0.57	-0.6
1,927,027	+	yraR	NOLOHH_10005	0.57	+0.3
1,927,028	-	yraR	NOLOHH_10005	0.57	+0.2
1,927,062	-	yraR	NOLOHH_10005	0.63	+0.2
1,927,110	-	yraR	NOLOHH_10005	0.70	+0.5
1,927,170	-	yraR	NOLOHH_10005	0.80	-0.3
1,927,170	-	yraR	NOLOHH_10005	0.80	-0.2
1,927,265	+				+0.2
1,927,317	+				+0.5
1,927,326	+				-0.5
1,927,327	-				-0.5
1,927,356	-				-0.8
1,927,356	-				+2.1
1,927,372	-				+0.4
1,927,372	-				-0.5
1,927,462	+				-0.8
1,927,463	-				+0.1
1,927,463	-				-0.6
1,927,463	-				+0.7
1,927,480	+	yraQ	NOLOHH_10010	0.10	-0.1
1,927,480	+	yraQ	NOLOHH_10010	0.10	+1.4
1,927,481	-	yraQ	NOLOHH_10010	0.10	+1.1
1,927,483	+	yraQ	NOLOHH_10010	0.11	+0.2
1,927,519	-	yraQ	NOLOHH_10010	0.14	-0.3
1,927,531	-	yraQ	NOLOHH_10010	0.15	-1.7