Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt sbp and pfkA are separated by 319 nucleotides pfkA and fieF are separated by 180 nucleotides
NOLOHH_05955: sbp - sulfate/thiosulfate ABC transporter substrate-binding protein Sbp, at 1,118,894 to 1,119,883
sbp
NOLOHH_05965: pfkA - 6-phosphofructokinase, at 1,120,203 to 1,121,165
pfkA
NOLOHH_05970: fieF - CDF family cation-efflux transporter FieF, at 1,121,346 to 1,122,248
fieF
Position (kb) 1120
1121
1122 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1119.209 kb on - strand, within sbp at 1119.263 kb on + strand, within sbp at 1119.264 kb on - strand, within sbp at 1119.264 kb on - strand, within sbp at 1119.264 kb on - strand, within sbp at 1119.337 kb on + strand, within sbp at 1119.337 kb on + strand, within sbp at 1119.340 kb on - strand, within sbp at 1119.340 kb on - strand, within sbp at 1119.417 kb on + strand, within sbp at 1119.417 kb on + strand, within sbp at 1119.417 kb on + strand, within sbp at 1119.418 kb on - strand, within sbp at 1119.418 kb on - strand, within sbp at 1119.418 kb on - strand, within sbp at 1119.521 kb on - strand, within sbp at 1119.689 kb on - strand, within sbp at 1119.725 kb on - strand, within sbp at 1119.768 kb on + strand, within sbp at 1119.769 kb on - strand, within sbp at 1119.769 kb on - strand, within sbp at 1119.777 kb on + strand, within sbp at 1119.778 kb on - strand, within sbp at 1119.798 kb on + strand at 1119.799 kb on - strand at 1119.809 kb on - strand at 1119.820 kb on + strand at 1119.866 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.897 kb on + strand at 1119.898 kb on - strand at 1119.898 kb on - strand at 1119.898 kb on - strand at 1119.898 kb on - strand at 1119.898 kb on - strand at 1119.898 kb on - strand at 1119.968 kb on - strand at 1119.983 kb on - strand at 1119.996 kb on - strand at 1120.021 kb on + strand at 1120.120 kb on - strand at 1120.175 kb on + strand at 1120.204 kb on + strand at 1120.207 kb on + strand at 1120.208 kb on - strand at 1120.208 kb on - strand at 1120.308 kb on - strand, within pfkA at 1120.312 kb on - strand, within pfkA at 1120.354 kb on + strand, within pfkA at 1120.379 kb on + strand, within pfkA at 1120.493 kb on + strand, within pfkA at 1120.493 kb on + strand, within pfkA at 1120.493 kb on + strand, within pfkA at 1120.493 kb on + strand, within pfkA at 1120.493 kb on + strand, within pfkA at 1120.493 kb on + strand, within pfkA at 1120.493 kb on + strand, within pfkA at 1120.558 kb on - strand, within pfkA at 1120.722 kb on + strand, within pfkA at 1120.759 kb on + strand, within pfkA at 1120.759 kb on + strand, within pfkA at 1120.760 kb on - strand, within pfkA at 1120.846 kb on + strand, within pfkA at 1120.846 kb on + strand, within pfkA at 1120.846 kb on + strand, within pfkA at 1120.846 kb on + strand, within pfkA at 1121.007 kb on + strand, within pfkA at 1121.008 kb on - strand, within pfkA at 1121.029 kb on + strand, within pfkA at 1121.030 kb on - strand, within pfkA at 1121.050 kb on + strand, within pfkA at 1121.051 kb on - strand, within pfkA at 1121.055 kb on - strand, within pfkA at 1121.160 kb on - strand at 1121.169 kb on + strand at 1121.169 kb on + strand at 1121.169 kb on + strand at 1121.169 kb on + strand at 1121.170 kb on - strand at 1121.251 kb on + strand at 1121.251 kb on + strand at 1121.252 kb on - strand at 1121.252 kb on - strand at 1121.252 kb on - strand at 1121.252 kb on - strand at 1121.252 kb on - strand at 1121.252 kb on - strand at 1121.255 kb on - strand at 1121.256 kb on + strand at 1121.257 kb on - strand at 1121.309 kb on - strand at 1121.338 kb on + strand at 1121.338 kb on + strand at 1121.339 kb on - strand at 1121.340 kb on + strand at 1121.348 kb on - strand at 1121.357 kb on + strand at 1121.357 kb on + strand at 1121.358 kb on - strand at 1121.358 kb on - strand at 1121.406 kb on - strand at 1121.406 kb on - strand at 1121.409 kb on + strand at 1121.409 kb on + strand at 1121.410 kb on - strand at 1121.410 kb on - strand at 1121.410 kb on - strand at 1121.410 kb on - strand at 1121.410 kb on - strand at 1121.410 kb on - strand at 1121.410 kb on - strand at 1121.439 kb on - strand, within fieF at 1121.448 kb on + strand, within fieF at 1121.448 kb on + strand, within fieF at 1121.448 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.465 kb on + strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.466 kb on - strand, within fieF at 1121.516 kb on + strand, within fieF at 1121.595 kb on - strand, within fieF at 1121.654 kb on - strand, within fieF at 1121.654 kb on - strand, within fieF at 1121.673 kb on - strand, within fieF at 1121.674 kb on + strand, within fieF at 1121.675 kb on - strand, within fieF at 1121.675 kb on - strand, within fieF at 1121.676 kb on + strand, within fieF at 1121.676 kb on + strand, within fieF at 1121.677 kb on - strand, within fieF at 1121.677 kb on - strand, within fieF at 1121.677 kb on - strand, within fieF at 1121.677 kb on - strand, within fieF at 1121.677 kb on - strand, within fieF at 1121.682 kb on - strand, within fieF at 1121.683 kb on + strand, within fieF at 1121.684 kb on - strand, within fieF at 1121.774 kb on + strand, within fieF at 1121.789 kb on - strand, within fieF at 1121.789 kb on - strand, within fieF at 1121.789 kb on - strand, within fieF at 1121.793 kb on + strand, within fieF at 1121.793 kb on + strand, within fieF at 1121.793 kb on + strand, within fieF at 1121.793 kb on + strand, within fieF at 1121.793 kb on + strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.794 kb on - strand, within fieF at 1121.868 kb on - strand, within fieF at 1121.931 kb on + strand, within fieF at 1121.931 kb on + strand, within fieF at 1121.932 kb on - strand, within fieF at 1121.964 kb on + strand, within fieF at 1121.982 kb on - strand, within fieF at 1121.982 kb on - strand, within fieF at 1121.987 kb on + strand, within fieF at 1121.987 kb on + strand, within fieF at 1121.987 kb on + strand, within fieF at 1121.987 kb on + strand, within fieF at 1121.988 kb on - strand, within fieF at 1121.988 kb on - strand, within fieF at 1121.988 kb on - strand, within fieF at 1121.988 kb on - strand, within fieF at 1122.079 kb on - strand, within fieF at 1122.079 kb on - strand, within fieF at 1122.079 kb on - strand, within fieF at 1122.134 kb on + strand, within fieF at 1122.135 kb on - strand, within fieF at 1122.135 kb on - strand, within fieF at 1122.151 kb on + strand, within fieF at 1122.152 kb on - strand, within fieF at 1122.152 kb on - strand, within fieF at 1122.152 kb on - strand, within fieF
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 1,119,209 - sbp NOLOHH_05955 0.32 -0.4 1,119,263 + sbp NOLOHH_05955 0.37 -0.6 1,119,264 - sbp NOLOHH_05955 0.37 +1.1 1,119,264 - sbp NOLOHH_05955 0.37 -0.4 1,119,264 - sbp NOLOHH_05955 0.37 -0.3 1,119,337 + sbp NOLOHH_05955 0.45 +0.3 1,119,337 + sbp NOLOHH_05955 0.45 +1.1 1,119,340 - sbp NOLOHH_05955 0.45 +0.1 1,119,340 - sbp NOLOHH_05955 0.45 -0.4 1,119,417 + sbp NOLOHH_05955 0.53 +0.4 1,119,417 + sbp NOLOHH_05955 0.53 -0.8 1,119,417 + sbp NOLOHH_05955 0.53 +0.6 1,119,418 - sbp NOLOHH_05955 0.53 +0.2 1,119,418 - sbp NOLOHH_05955 0.53 -0.3 1,119,418 - sbp NOLOHH_05955 0.53 +0.6 1,119,521 - sbp NOLOHH_05955 0.63 +0.1 1,119,689 - sbp NOLOHH_05955 0.80 -0.8 1,119,725 - sbp NOLOHH_05955 0.84 +0.1 1,119,768 + sbp NOLOHH_05955 0.88 -0.7 1,119,769 - sbp NOLOHH_05955 0.88 -1.0 1,119,769 - sbp NOLOHH_05955 0.88 +0.2 1,119,777 + sbp NOLOHH_05955 0.89 +0.6 1,119,778 - sbp NOLOHH_05955 0.89 +0.6 1,119,798 + -1.8 1,119,799 - +0.1 1,119,809 - +0.3 1,119,820 + +0.6 1,119,866 + +0.4 1,119,897 + +1.3 1,119,897 + -0.2 1,119,897 + -0.9 1,119,897 + +0.3 1,119,897 + -0.9 1,119,897 + -2.0 1,119,897 + -1.0 1,119,897 + +0.2 1,119,897 + +0.3 1,119,898 - -0.4 1,119,898 - -1.1 1,119,898 - +0.6 1,119,898 - -1.1 1,119,898 - -0.1 1,119,898 - +0.9 1,119,968 - +0.8 1,119,983 - +0.6 1,119,996 - +0.4 1,120,021 + -0.2 1,120,120 - +0.1 1,120,175 + -1.4 1,120,204 + -0.1 1,120,207 + -0.9 1,120,208 - +0.3 1,120,208 - +0.0 1,120,308 - pfkA NOLOHH_05965 0.11 +0.6 1,120,312 - pfkA NOLOHH_05965 0.11 -0.4 1,120,354 + pfkA NOLOHH_05965 0.16 +2.1 1,120,379 + pfkA NOLOHH_05965 0.18 +2.1 1,120,493 + pfkA NOLOHH_05965 0.30 +0.6 1,120,493 + pfkA NOLOHH_05965 0.30 -0.0 1,120,493 + pfkA NOLOHH_05965 0.30 -0.4 1,120,493 + pfkA NOLOHH_05965 0.30 +0.3 1,120,493 + pfkA NOLOHH_05965 0.30 +0.6 1,120,493 + pfkA NOLOHH_05965 0.30 -1.8 1,120,493 + pfkA NOLOHH_05965 0.30 -0.4 1,120,558 - pfkA NOLOHH_05965 0.37 +0.6 1,120,722 + pfkA NOLOHH_05965 0.54 +1.0 1,120,759 + pfkA NOLOHH_05965 0.58 -0.4 1,120,759 + pfkA NOLOHH_05965 0.58 +0.6 1,120,760 - pfkA NOLOHH_05965 0.58 -1.0 1,120,846 + pfkA NOLOHH_05965 0.67 -0.4 1,120,846 + pfkA NOLOHH_05965 0.67 -0.4 1,120,846 + pfkA NOLOHH_05965 0.67 -1.0 1,120,846 + pfkA NOLOHH_05965 0.67 +1.6 1,121,007 + pfkA NOLOHH_05965 0.83 +2.1 1,121,008 - pfkA NOLOHH_05965 0.84 +0.6 1,121,029 + pfkA NOLOHH_05965 0.86 -0.4 1,121,030 - pfkA NOLOHH_05965 0.86 +0.6 1,121,050 + pfkA NOLOHH_05965 0.88 +1.6 1,121,051 - pfkA NOLOHH_05965 0.88 -0.7 1,121,055 - pfkA NOLOHH_05965 0.88 +0.6 1,121,160 - -0.0 1,121,169 + +0.6 1,121,169 + -0.4 1,121,169 + +0.2 1,121,169 + -0.4 1,121,170 - +0.6 1,121,251 + -0.6 1,121,251 + -0.4 1,121,252 - -0.0 1,121,252 - +0.3 1,121,252 - -1.3 1,121,252 - -0.2 1,121,252 - +1.2 1,121,252 - +0.2 1,121,255 - +1.0 1,121,256 + -0.2 1,121,257 - -0.5 1,121,309 - +0.0 1,121,338 + -0.1 1,121,338 + +0.2 1,121,339 - -0.1 1,121,340 + -0.0 1,121,348 - -0.5 1,121,357 + +1.1 1,121,357 + -1.2 1,121,358 - -0.6 1,121,358 - -1.2 1,121,406 - -0.3 1,121,406 - +0.6 1,121,409 + -0.1 1,121,409 + -1.0 1,121,410 - +1.6 1,121,410 - -0.1 1,121,410 - +0.7 1,121,410 - -0.2 1,121,410 - -0.4 1,121,410 - -0.1 1,121,410 - +0.0 1,121,439 - fieF NOLOHH_05970 0.10 +0.3 1,121,448 + fieF NOLOHH_05970 0.11 -0.1 1,121,448 + fieF NOLOHH_05970 0.11 -0.3 1,121,448 + fieF NOLOHH_05970 0.11 -0.8 1,121,465 + fieF NOLOHH_05970 0.13 -0.1 1,121,465 + fieF NOLOHH_05970 0.13 +2.1 1,121,465 + fieF NOLOHH_05970 0.13 -0.7 1,121,465 + fieF NOLOHH_05970 0.13 -0.3 1,121,465 + fieF NOLOHH_05970 0.13 -0.5 1,121,465 + fieF NOLOHH_05970 0.13 -1.0 1,121,465 + fieF NOLOHH_05970 0.13 +0.6 1,121,465 + fieF NOLOHH_05970 0.13 -0.8 1,121,465 + fieF NOLOHH_05970 0.13 +0.2 1,121,465 + fieF NOLOHH_05970 0.13 +1.3 1,121,465 + fieF NOLOHH_05970 0.13 +0.6 1,121,466 - fieF NOLOHH_05970 0.13 -0.1 1,121,466 - fieF NOLOHH_05970 0.13 -0.9 1,121,466 - fieF NOLOHH_05970 0.13 +0.1 1,121,466 - fieF NOLOHH_05970 0.13 +0.8 1,121,466 - fieF NOLOHH_05970 0.13 +0.8 1,121,466 - fieF NOLOHH_05970 0.13 -0.4 1,121,466 - fieF NOLOHH_05970 0.13 -0.7 1,121,466 - fieF NOLOHH_05970 0.13 -0.2 1,121,466 - fieF NOLOHH_05970 0.13 -0.4 1,121,466 - fieF NOLOHH_05970 0.13 -0.9 1,121,466 - fieF NOLOHH_05970 0.13 -1.4 1,121,516 + fieF NOLOHH_05970 0.19 -0.9 1,121,595 - fieF NOLOHH_05970 0.28 +0.5 1,121,654 - fieF NOLOHH_05970 0.34 +1.0 1,121,654 - fieF NOLOHH_05970 0.34 -0.9 1,121,673 - fieF NOLOHH_05970 0.36 +0.1 1,121,674 + fieF NOLOHH_05970 0.36 +0.1 1,121,675 - fieF NOLOHH_05970 0.36 -1.0 1,121,675 - fieF NOLOHH_05970 0.36 -0.2 1,121,676 + fieF NOLOHH_05970 0.37 +0.1 1,121,676 + fieF NOLOHH_05970 0.37 -0.4 1,121,677 - fieF NOLOHH_05970 0.37 -0.9 1,121,677 - fieF NOLOHH_05970 0.37 -0.1 1,121,677 - fieF NOLOHH_05970 0.37 +0.3 1,121,677 - fieF NOLOHH_05970 0.37 +0.5 1,121,677 - fieF NOLOHH_05970 0.37 -0.0 1,121,682 - fieF NOLOHH_05970 0.37 -0.2 1,121,683 + fieF NOLOHH_05970 0.37 +1.6 1,121,684 - fieF NOLOHH_05970 0.37 -0.4 1,121,774 + fieF NOLOHH_05970 0.47 -0.4 1,121,789 - fieF NOLOHH_05970 0.49 -0.7 1,121,789 - fieF NOLOHH_05970 0.49 -0.0 1,121,789 - fieF NOLOHH_05970 0.49 +0.2 1,121,793 + fieF NOLOHH_05970 0.50 +0.6 1,121,793 + fieF NOLOHH_05970 0.50 +0.6 1,121,793 + fieF NOLOHH_05970 0.50 -0.6 1,121,793 + fieF NOLOHH_05970 0.50 +0.9 1,121,793 + fieF NOLOHH_05970 0.50 +0.2 1,121,794 - fieF NOLOHH_05970 0.50 +0.3 1,121,794 - fieF NOLOHH_05970 0.50 +0.0 1,121,794 - fieF NOLOHH_05970 0.50 -0.2 1,121,794 - fieF NOLOHH_05970 0.50 -0.6 1,121,794 - fieF NOLOHH_05970 0.50 +0.4 1,121,794 - fieF NOLOHH_05970 0.50 -0.6 1,121,794 - fieF NOLOHH_05970 0.50 -0.1 1,121,794 - fieF NOLOHH_05970 0.50 -0.9 1,121,794 - fieF NOLOHH_05970 0.50 +0.1 1,121,868 - fieF NOLOHH_05970 0.58 +0.1 1,121,931 + fieF NOLOHH_05970 0.65 +0.1 1,121,931 + fieF NOLOHH_05970 0.65 +0.2 1,121,932 - fieF NOLOHH_05970 0.65 -0.4 1,121,964 + fieF NOLOHH_05970 0.68 +0.4 1,121,982 - fieF NOLOHH_05970 0.70 +1.0 1,121,982 - fieF NOLOHH_05970 0.70 +0.3 1,121,987 + fieF NOLOHH_05970 0.71 +0.2 1,121,987 + fieF NOLOHH_05970 0.71 +0.1 1,121,987 + fieF NOLOHH_05970 0.71 +1.3 1,121,987 + fieF NOLOHH_05970 0.71 -0.6 1,121,988 - fieF NOLOHH_05970 0.71 -0.6 1,121,988 - fieF NOLOHH_05970 0.71 +0.9 1,121,988 - fieF NOLOHH_05970 0.71 +0.7 1,121,988 - fieF NOLOHH_05970 0.71 -0.4 1,122,079 - fieF NOLOHH_05970 0.81 -0.6 1,122,079 - fieF NOLOHH_05970 0.81 -0.9 1,122,079 - fieF NOLOHH_05970 0.81 -0.4 1,122,134 + fieF NOLOHH_05970 0.87 -1.0 1,122,135 - fieF NOLOHH_05970 0.87 -0.2 1,122,135 - fieF NOLOHH_05970 0.87 -0.2 1,122,151 + fieF NOLOHH_05970 0.89 +0.2 1,122,152 - fieF NOLOHH_05970 0.89 -0.3 1,122,152 - fieF NOLOHH_05970 0.89 -0.7 1,122,152 - fieF NOLOHH_05970 0.89 -0.5
Or see this region's nucleotide sequence