Strain Fitness in Escherichia coli ECOR27 around NOLOHH_05670

Experiment: Bas09

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt16S_rrna and murI are separated by 373 nucleotidesmurI and btuB overlap by 56 nucleotides NOLOHH_05665: 16S_rrna - 16S ribosomal RNA, at 1,052,325 to 1,053,866 _rrna NOLOHH_05670: murI - glutamate racemase, at 1,054,240 to 1,055,097 murI NOLOHH_05675: btuB - TonB-dependent vitamin B12 receptor BtuB, at 1,055,042 to 1,056,886 btuB Position (kb) 1054 1055 1056Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1055.221 kb on - strandat 1055.226 kb on + strandat 1055.226 kb on + strandat 1055.236 kb on - strand, within btuBat 1055.236 kb on - strand, within btuBat 1055.248 kb on - strand, within btuBat 1055.259 kb on - strand, within btuBat 1055.262 kb on + strand, within btuBat 1055.263 kb on - strand, within btuBat 1055.263 kb on - strand, within btuBat 1055.263 kb on - strand, within btuBat 1055.269 kb on - strand, within btuBat 1055.269 kb on - strand, within btuBat 1055.269 kb on - strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.272 kb on + strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.273 kb on - strand, within btuBat 1055.275 kb on + strand, within btuBat 1055.293 kb on - strand, within btuBat 1055.293 kb on - strand, within btuBat 1055.314 kb on - strand, within btuBat 1055.314 kb on - strand, within btuBat 1055.339 kb on + strand, within btuBat 1055.340 kb on - strand, within btuBat 1055.340 kb on - strand, within btuBat 1055.379 kb on + strand, within btuBat 1055.379 kb on + strand, within btuBat 1055.379 kb on + strand, within btuBat 1055.379 kb on + strand, within btuBat 1055.380 kb on - strand, within btuBat 1055.380 kb on - strand, within btuBat 1055.380 kb on - strand, within btuBat 1055.380 kb on - strand, within btuBat 1055.380 kb on - strand, within btuBat 1055.380 kb on - strand, within btuBat 1055.385 kb on + strand, within btuBat 1055.385 kb on + strand, within btuBat 1055.386 kb on - strand, within btuBat 1055.386 kb on - strand, within btuBat 1055.395 kb on + strand, within btuBat 1055.396 kb on - strand, within btuBat 1055.466 kb on + strand, within btuBat 1055.467 kb on - strand, within btuBat 1055.613 kb on + strand, within btuBat 1055.622 kb on + strand, within btuBat 1055.622 kb on + strand, within btuBat 1055.623 kb on - strand, within btuBat 1055.623 kb on - strand, within btuBat 1055.647 kb on + strand, within btuBat 1055.647 kb on + strand, within btuBat 1055.647 kb on + strand, within btuBat 1055.648 kb on - strand, within btuBat 1055.648 kb on - strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.649 kb on + strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.650 kb on - strand, within btuBat 1055.743 kb on + strand, within btuBat 1055.744 kb on - strand, within btuBat 1055.773 kb on + strand, within btuBat 1055.774 kb on - strand, within btuBat 1055.805 kb on + strand, within btuBat 1055.805 kb on + strand, within btuBat 1055.806 kb on - strand, within btuBat 1055.806 kb on - strand, within btuBat 1055.806 kb on - strand, within btuBat 1055.818 kb on + strand, within btuBat 1055.818 kb on + strand, within btuBat 1055.819 kb on - strand, within btuBat 1055.819 kb on - strand, within btuBat 1055.829 kb on + strand, within btuBat 1055.830 kb on - strand, within btuBat 1055.845 kb on - strand, within btuBat 1055.845 kb on - strand, within btuBat 1055.863 kb on + strand, within btuBat 1055.864 kb on - strand, within btuBat 1055.864 kb on - strand, within btuBat 1055.897 kb on - strand, within btuBat 1055.899 kb on + strand, within btuBat 1055.899 kb on + strand, within btuBat 1055.900 kb on - strand, within btuBat 1055.940 kb on + strand, within btuBat 1055.940 kb on + strand, within btuBat 1055.941 kb on - strand, within btuBat 1055.941 kb on - strand, within btuBat 1055.941 kb on - strand, within btuBat 1055.941 kb on - strand, within btuBat 1055.976 kb on + strand, within btuBat 1055.977 kb on - strand, within btuBat 1055.997 kb on + strand, within btuBat 1055.997 kb on + strand, within btuBat 1055.997 kb on + strand, within btuBat 1055.997 kb on + strand, within btuBat 1055.998 kb on - strand, within btuBat 1055.998 kb on - strand, within btuBat 1055.998 kb on - strand, within btuBat 1055.998 kb on - strand, within btuBat 1055.998 kb on - strand, within btuBat 1055.998 kb on - strand, within btuBat 1056.003 kb on + strand, within btuBat 1056.004 kb on - strand, within btuBat 1056.013 kb on + strand, within btuBat 1056.019 kb on + strand, within btuBat 1056.020 kb on - strand, within btuBat 1056.020 kb on - strand, within btuBat 1056.020 kb on - strand, within btuBat 1056.021 kb on + strand, within btuBat 1056.022 kb on - strand, within btuBat 1056.022 kb on - strand, within btuBat 1056.022 kb on - strand, within btuBat 1056.028 kb on + strand, within btuB

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas09
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1,055,221 - +0.5
1,055,226 + -0.6
1,055,226 + -0.1
1,055,236 - btuB NOLOHH_05675 0.11 +0.3
1,055,236 - btuB NOLOHH_05675 0.11 -0.1
1,055,248 - btuB NOLOHH_05675 0.11 -0.0
1,055,259 - btuB NOLOHH_05675 0.12 -0.4
1,055,262 + btuB NOLOHH_05675 0.12 +1.1
1,055,263 - btuB NOLOHH_05675 0.12 +1.1
1,055,263 - btuB NOLOHH_05675 0.12 +0.1
1,055,263 - btuB NOLOHH_05675 0.12 +0.7
1,055,269 - btuB NOLOHH_05675 0.12 -1.1
1,055,269 - btuB NOLOHH_05675 0.12 +0.8
1,055,269 - btuB NOLOHH_05675 0.12 -0.1
1,055,272 + btuB NOLOHH_05675 0.12 +0.8
1,055,272 + btuB NOLOHH_05675 0.12 +0.2
1,055,272 + btuB NOLOHH_05675 0.12 +0.5
1,055,272 + btuB NOLOHH_05675 0.12 -0.2
1,055,272 + btuB NOLOHH_05675 0.12 +0.5
1,055,272 + btuB NOLOHH_05675 0.12 +0.3
1,055,272 + btuB NOLOHH_05675 0.12 +0.3
1,055,272 + btuB NOLOHH_05675 0.12 +1.5
1,055,273 - btuB NOLOHH_05675 0.13 -1.5
1,055,273 - btuB NOLOHH_05675 0.13 +0.0
1,055,273 - btuB NOLOHH_05675 0.13 +1.1
1,055,273 - btuB NOLOHH_05675 0.13 -0.7
1,055,273 - btuB NOLOHH_05675 0.13 +0.7
1,055,273 - btuB NOLOHH_05675 0.13 -0.7
1,055,273 - btuB NOLOHH_05675 0.13 +0.5
1,055,273 - btuB NOLOHH_05675 0.13 -0.1
1,055,273 - btuB NOLOHH_05675 0.13 +0.2
1,055,273 - btuB NOLOHH_05675 0.13 -1.9
1,055,273 - btuB NOLOHH_05675 0.13 +0.6
1,055,275 + btuB NOLOHH_05675 0.13 -1.1
1,055,293 - btuB NOLOHH_05675 0.14 +1.3
1,055,293 - btuB NOLOHH_05675 0.14 +0.4
1,055,314 - btuB NOLOHH_05675 0.15 +1.0
1,055,314 - btuB NOLOHH_05675 0.15 -0.3
1,055,339 + btuB NOLOHH_05675 0.16 +1.3
1,055,340 - btuB NOLOHH_05675 0.16 +0.2
1,055,340 - btuB NOLOHH_05675 0.16 -1.8
1,055,379 + btuB NOLOHH_05675 0.18 +0.2
1,055,379 + btuB NOLOHH_05675 0.18 +0.5
1,055,379 + btuB NOLOHH_05675 0.18 +1.5
1,055,379 + btuB NOLOHH_05675 0.18 -0.8
1,055,380 - btuB NOLOHH_05675 0.18 -0.7
1,055,380 - btuB NOLOHH_05675 0.18 -0.8
1,055,380 - btuB NOLOHH_05675 0.18 -1.1
1,055,380 - btuB NOLOHH_05675 0.18 +1.5
1,055,380 - btuB NOLOHH_05675 0.18 +0.1
1,055,380 - btuB NOLOHH_05675 0.18 +0.3
1,055,385 + btuB NOLOHH_05675 0.19 +0.1
1,055,385 + btuB NOLOHH_05675 0.19 -2.2
1,055,386 - btuB NOLOHH_05675 0.19 -2.2
1,055,386 - btuB NOLOHH_05675 0.19 -1.1
1,055,395 + btuB NOLOHH_05675 0.19 +1.4
1,055,396 - btuB NOLOHH_05675 0.19 -0.5
1,055,466 + btuB NOLOHH_05675 0.23 +0.0
1,055,467 - btuB NOLOHH_05675 0.23 +0.3
1,055,613 + btuB NOLOHH_05675 0.31 -0.1
1,055,622 + btuB NOLOHH_05675 0.31 +1.1
1,055,622 + btuB NOLOHH_05675 0.31 -1.2
1,055,623 - btuB NOLOHH_05675 0.31 +2.0
1,055,623 - btuB NOLOHH_05675 0.31 +1.0
1,055,647 + btuB NOLOHH_05675 0.33 +0.2
1,055,647 + btuB NOLOHH_05675 0.33 -0.5
1,055,647 + btuB NOLOHH_05675 0.33 +0.4
1,055,648 - btuB NOLOHH_05675 0.33 +2.5
1,055,648 - btuB NOLOHH_05675 0.33 -0.4
1,055,649 + btuB NOLOHH_05675 0.33 +0.6
1,055,649 + btuB NOLOHH_05675 0.33 -1.0
1,055,649 + btuB NOLOHH_05675 0.33 -0.2
1,055,649 + btuB NOLOHH_05675 0.33 +0.2
1,055,649 + btuB NOLOHH_05675 0.33 +1.5
1,055,649 + btuB NOLOHH_05675 0.33 -0.1
1,055,649 + btuB NOLOHH_05675 0.33 -0.1
1,055,649 + btuB NOLOHH_05675 0.33 +0.2
1,055,649 + btuB NOLOHH_05675 0.33 -1.1
1,055,650 - btuB NOLOHH_05675 0.33 +0.5
1,055,650 - btuB NOLOHH_05675 0.33 -0.5
1,055,650 - btuB NOLOHH_05675 0.33 +0.1
1,055,650 - btuB NOLOHH_05675 0.33 -1.3
1,055,650 - btuB NOLOHH_05675 0.33 -1.8
1,055,650 - btuB NOLOHH_05675 0.33 +0.1
1,055,650 - btuB NOLOHH_05675 0.33 -0.1
1,055,650 - btuB NOLOHH_05675 0.33 -0.8
1,055,650 - btuB NOLOHH_05675 0.33 +0.1
1,055,650 - btuB NOLOHH_05675 0.33 -0.1
1,055,743 + btuB NOLOHH_05675 0.38 -0.2
1,055,744 - btuB NOLOHH_05675 0.38 -0.6
1,055,773 + btuB NOLOHH_05675 0.40 -0.2
1,055,774 - btuB NOLOHH_05675 0.40 +0.9
1,055,805 + btuB NOLOHH_05675 0.41 -2.8
1,055,805 + btuB NOLOHH_05675 0.41 +0.9
1,055,806 - btuB NOLOHH_05675 0.41 -0.3
1,055,806 - btuB NOLOHH_05675 0.41 -0.5
1,055,806 - btuB NOLOHH_05675 0.41 +0.1
1,055,818 + btuB NOLOHH_05675 0.42 -1.8
1,055,818 + btuB NOLOHH_05675 0.42 -0.2
1,055,819 - btuB NOLOHH_05675 0.42 +0.5
1,055,819 - btuB NOLOHH_05675 0.42 +0.5
1,055,829 + btuB NOLOHH_05675 0.43 +1.1
1,055,830 - btuB NOLOHH_05675 0.43 +1.5
1,055,845 - btuB NOLOHH_05675 0.44 +0.7
1,055,845 - btuB NOLOHH_05675 0.44 -0.8
1,055,863 + btuB NOLOHH_05675 0.44 +0.1
1,055,864 - btuB NOLOHH_05675 0.45 -1.6
1,055,864 - btuB NOLOHH_05675 0.45 +0.0
1,055,897 - btuB NOLOHH_05675 0.46 -0.1
1,055,899 + btuB NOLOHH_05675 0.46 +0.0
1,055,899 + btuB NOLOHH_05675 0.46 +1.1
1,055,900 - btuB NOLOHH_05675 0.47 +1.3
1,055,940 + btuB NOLOHH_05675 0.49 -2.0
1,055,940 + btuB NOLOHH_05675 0.49 +0.0
1,055,941 - btuB NOLOHH_05675 0.49 -0.1
1,055,941 - btuB NOLOHH_05675 0.49 -0.5
1,055,941 - btuB NOLOHH_05675 0.49 -0.6
1,055,941 - btuB NOLOHH_05675 0.49 -0.6
1,055,976 + btuB NOLOHH_05675 0.51 +1.3
1,055,977 - btuB NOLOHH_05675 0.51 -0.6
1,055,997 + btuB NOLOHH_05675 0.52 +0.6
1,055,997 + btuB NOLOHH_05675 0.52 -0.9
1,055,997 + btuB NOLOHH_05675 0.52 +0.8
1,055,997 + btuB NOLOHH_05675 0.52 +0.5
1,055,998 - btuB NOLOHH_05675 0.52 -0.0
1,055,998 - btuB NOLOHH_05675 0.52 -0.2
1,055,998 - btuB NOLOHH_05675 0.52 -0.1
1,055,998 - btuB NOLOHH_05675 0.52 -0.6
1,055,998 - btuB NOLOHH_05675 0.52 +0.2
1,055,998 - btuB NOLOHH_05675 0.52 -1.2
1,056,003 + btuB NOLOHH_05675 0.52 -0.2
1,056,004 - btuB NOLOHH_05675 0.52 +0.8
1,056,013 + btuB NOLOHH_05675 0.53 -0.6
1,056,019 + btuB NOLOHH_05675 0.53 -0.2
1,056,020 - btuB NOLOHH_05675 0.53 -0.6
1,056,020 - btuB NOLOHH_05675 0.53 -1.6
1,056,020 - btuB NOLOHH_05675 0.53 -0.2
1,056,021 + btuB NOLOHH_05675 0.53 -1.2
1,056,022 - btuB NOLOHH_05675 0.53 +0.0
1,056,022 - btuB NOLOHH_05675 0.53 +0.2
1,056,022 - btuB NOLOHH_05675 0.53 +0.0
1,056,028 + btuB NOLOHH_05675 0.53 -0.5

Or see this region's nucleotide sequence