Strain Fitness in Escherichia coli ECOR27 around NOLOHH_04735

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
858,700	+	cadC	NOLOHH_04730	0.66	+1.4
858,722	+	cadC	NOLOHH_04730	0.67	+0.5
858,769	-	cadC	NOLOHH_04730	0.70	-0.5
858,877	-	cadC	NOLOHH_04730	0.77	+0.3
858,940	+	cadC	NOLOHH_04730	0.81	+0.9
858,941	-	cadC	NOLOHH_04730	0.81	+0.1
858,942	+	cadC	NOLOHH_04730	0.82	-0.6
859,184	+				+0.9
859,197	-				-0.5
859,447	-				+0.9
859,686	-				+0.1
859,686	-				+0.9
859,686	-				+0.9
859,701	+				+0.7
859,731	+	cadB	NOLOHH_04735	0.10	+0.3
859,731	+	cadB	NOLOHH_04735	0.10	+0.2
859,754	-	cadB	NOLOHH_04735	0.12	+0.0
859,754	-	cadB	NOLOHH_04735	0.12	+0.7
859,757	+	cadB	NOLOHH_04735	0.12	+0.1
859,757	+	cadB	NOLOHH_04735	0.12	-3.9
859,757	+	cadB	NOLOHH_04735	0.12	-0.2
859,757	+	cadB	NOLOHH_04735	0.12	-0.8
859,867	-	cadB	NOLOHH_04735	0.21	+0.5
859,934	+	cadB	NOLOHH_04735	0.26	+1.6
859,965	+	cadB	NOLOHH_04735	0.28	+0.7
859,986	+	cadB	NOLOHH_04735	0.30	-0.3
859,987	-	cadB	NOLOHH_04735	0.30	+0.3
859,994	+	cadB	NOLOHH_04735	0.30	+0.2
859,999	-	cadB	NOLOHH_04735	0.31	-0.2
859,999	-	cadB	NOLOHH_04735	0.31	+0.4
860,034	+	cadB	NOLOHH_04735	0.33	-0.3
860,034	+	cadB	NOLOHH_04735	0.33	+0.7
860,055	+	cadB	NOLOHH_04735	0.35	+0.0
860,111	-	cadB	NOLOHH_04735	0.39	+0.5
860,118	+	cadB	NOLOHH_04735	0.39	-0.1
860,213	+	cadB	NOLOHH_04735	0.47	-0.3
860,213	+	cadB	NOLOHH_04735	0.47	+0.3
860,213	+	cadB	NOLOHH_04735	0.47	-1.9
860,213	+	cadB	NOLOHH_04735	0.47	-0.3
860,214	-	cadB	NOLOHH_04735	0.47	-0.8
860,214	-	cadB	NOLOHH_04735	0.47	+0.3
860,214	-	cadB	NOLOHH_04735	0.47	+0.1
860,217	+	cadB	NOLOHH_04735	0.47	+0.1
860,218	-	cadB	NOLOHH_04735	0.47	+0.4
860,223	+	cadB	NOLOHH_04735	0.47	+0.2
860,224	-	cadB	NOLOHH_04735	0.47	+0.5
860,224	-	cadB	NOLOHH_04735	0.47	+0.7
860,286	+	cadB	NOLOHH_04735	0.52	+1.1
860,286	+	cadB	NOLOHH_04735	0.52	+1.0
860,293	+	cadB	NOLOHH_04735	0.53	-0.2
860,293	+	cadB	NOLOHH_04735	0.53	-1.1
860,326	+	cadB	NOLOHH_04735	0.55	-0.5
860,326	+	cadB	NOLOHH_04735	0.55	-2.1
860,326	+	cadB	NOLOHH_04735	0.55	+0.8
860,327	-	cadB	NOLOHH_04735	0.55	-0.4
860,327	-	cadB	NOLOHH_04735	0.55	-1.7
860,483	+	cadB	NOLOHH_04735	0.67	-0.5
860,483	+	cadB	NOLOHH_04735	0.67	-0.5
860,484	-	cadB	NOLOHH_04735	0.67	+0.1
860,484	-	cadB	NOLOHH_04735	0.67	-1.1
860,518	+	cadB	NOLOHH_04735	0.69	+0.1
860,686	+	cadB	NOLOHH_04735	0.82	+0.1
860,687	-	cadB	NOLOHH_04735	0.82	+0.7
860,687	-	cadB	NOLOHH_04735	0.82	-0.4
860,692	+	cadB	NOLOHH_04735	0.82	-0.8
860,693	-	cadB	NOLOHH_04735	0.83	-1.8
860,824	-				+0.1
860,857	+				+0.0
860,924	-				-2.1
860,927	+				-0.1
860,928	-				+0.8
861,004	+				+1.1
861,004	+				-1.0
861,046	+				-0.1
861,188	+				+1.5
861,188	+				-0.1
861,189	-				+0.3
861,260	+	cadA	NOLOHH_04740	0.12	-0.0
861,261	-	cadA	NOLOHH_04740	0.12	-0.7
861,276	+	cadA	NOLOHH_04740	0.13	-1.2
861,276	+	cadA	NOLOHH_04740	0.13	-1.7
861,277	-	cadA	NOLOHH_04740	0.13	+0.2
861,277	-	cadA	NOLOHH_04740	0.13	-0.5
861,374	+	cadA	NOLOHH_04740	0.17	-0.5
861,376	+	cadA	NOLOHH_04740	0.17	-0.3
861,404	-	cadA	NOLOHH_04740	0.19	-0.3
861,420	-	cadA	NOLOHH_04740	0.19	+0.9
861,434	-	cadA	NOLOHH_04740	0.20	-0.0
861,437	+	cadA	NOLOHH_04740	0.20	+0.0
861,438	-	cadA	NOLOHH_04740	0.20	+0.2
861,438	-	cadA	NOLOHH_04740	0.20	+1.1
861,439	+	cadA	NOLOHH_04740	0.20	+0.2
861,440	-	cadA	NOLOHH_04740	0.20	+0.9
861,449	-	cadA	NOLOHH_04740	0.21	-0.3
861,506	+	cadA	NOLOHH_04740	0.23	+0.2
861,507	-	cadA	NOLOHH_04740	0.23	+1.5
861,541	+	cadA	NOLOHH_04740	0.25	+0.9
861,612	-	cadA	NOLOHH_04740	0.28	-0.9
861,612	-	cadA	NOLOHH_04740	0.28	+1.5
861,612	-	cadA	NOLOHH_04740	0.28	-0.3
861,628	+	cadA	NOLOHH_04740	0.29	+0.1
861,628	+	cadA	NOLOHH_04740	0.29	+0.5
861,644	+	cadA	NOLOHH_04740	0.30	+1.3
861,644	+	cadA	NOLOHH_04740	0.30	+2.5
861,644	+	cadA	NOLOHH_04740	0.30	+0.2
861,644	+	cadA	NOLOHH_04740	0.30	-0.5
861,644	+	cadA	NOLOHH_04740	0.30	-0.1
861,645	-	cadA	NOLOHH_04740	0.30	-0.4
861,645	-	cadA	NOLOHH_04740	0.30	-0.1
861,645	-	cadA	NOLOHH_04740	0.30	+0.0
861,692	+	cadA	NOLOHH_04740	0.32	-0.2
861,692	+	cadA	NOLOHH_04740	0.32	-0.2
861,730	+	cadA	NOLOHH_04740	0.34	+0.7
861,785	+	cadA	NOLOHH_04740	0.36	+1.4
861,785	+	cadA	NOLOHH_04740	0.36	-1.5
861,786	-	cadA	NOLOHH_04740	0.36	+0.5
861,862	+	cadA	NOLOHH_04740	0.40	-0.4
861,863	-	cadA	NOLOHH_04740	0.40	-0.2
861,901	-	cadA	NOLOHH_04740	0.42	-1.0
861,909	+	cadA	NOLOHH_04740	0.42	-0.7
861,910	-	cadA	NOLOHH_04740	0.42	+0.1
861,922	+	cadA	NOLOHH_04740	0.43	-1.8
861,922	+	cadA	NOLOHH_04740	0.43	+0.7
861,922	+	cadA	NOLOHH_04740	0.43	-1.1
861,923	-	cadA	NOLOHH_04740	0.43	-0.5
861,923	-	cadA	NOLOHH_04740	0.43	+1.2
861,923	-	cadA	NOLOHH_04740	0.43	-0.5