Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dnaK and yaaI are separated by 377 nucleotides yaaI and msyB are separated by 25 nucleotides msyB and satP are separated by 148 nucleotides
NOLOHH_03385: dnaK - molecular chaperone DnaK, at 595,556 to 597,472
dnaK
NOLOHH_03390: yaaI - DUF2541 domain-containing protein, at 597,850 to 598,254
yaaI
NOLOHH_03395: msyB - acidic protein MsyB, at 598,280 to 598,993
msyB
NOLOHH_03400: satP - acetate uptake transporter, at 599,142 to 599,708
satP
Position (kb) 597
598
599 Strain fitness (log2 ratio) -2
-1
0
1
2 at 597.492 kb on - strand at 597.492 kb on - strand at 597.521 kb on - strand at 597.595 kb on + strand at 597.596 kb on - strand at 597.596 kb on - strand at 597.596 kb on - strand at 597.596 kb on - strand at 597.672 kb on + strand at 597.672 kb on + strand at 597.673 kb on - strand at 597.673 kb on - strand at 597.673 kb on - strand at 597.673 kb on - strand at 597.712 kb on - strand at 597.714 kb on - strand at 597.714 kb on - strand at 597.800 kb on + strand at 597.800 kb on + strand at 597.801 kb on - strand at 597.805 kb on + strand at 597.825 kb on - strand at 597.837 kb on + strand at 597.837 kb on + strand at 597.927 kb on + strand, within yaaI at 597.928 kb on - strand, within yaaI at 598.013 kb on + strand, within yaaI at 598.013 kb on + strand, within yaaI at 598.014 kb on - strand, within yaaI at 598.115 kb on + strand, within yaaI at 598.116 kb on - strand, within yaaI at 598.116 kb on - strand, within yaaI at 598.150 kb on - strand, within yaaI at 598.150 kb on - strand, within yaaI at 598.167 kb on + strand, within yaaI at 598.168 kb on - strand, within yaaI at 598.204 kb on - strand, within yaaI at 598.204 kb on - strand, within yaaI at 598.209 kb on + strand, within yaaI at 598.265 kb on + strand at 598.265 kb on + strand at 598.265 kb on + strand at 598.266 kb on - strand at 598.288 kb on + strand at 598.288 kb on + strand at 598.288 kb on + strand at 598.289 kb on - strand at 598.289 kb on - strand at 598.292 kb on + strand at 598.293 kb on - strand at 598.293 kb on - strand at 598.373 kb on - strand, within msyB at 598.404 kb on + strand, within msyB at 598.404 kb on + strand, within msyB at 598.405 kb on - strand, within msyB at 598.488 kb on + strand, within msyB at 598.488 kb on + strand, within msyB at 598.489 kb on - strand, within msyB at 598.510 kb on + strand, within msyB at 598.544 kb on + strand, within msyB at 598.607 kb on - strand, within msyB at 598.607 kb on - strand, within msyB at 598.663 kb on + strand, within msyB at 598.678 kb on + strand, within msyB at 598.678 kb on + strand, within msyB at 598.678 kb on + strand, within msyB at 598.678 kb on + strand, within msyB at 598.678 kb on + strand, within msyB at 598.678 kb on + strand, within msyB at 598.679 kb on - strand, within msyB at 598.679 kb on - strand, within msyB at 598.679 kb on - strand, within msyB at 598.679 kb on - strand, within msyB at 598.679 kb on - strand, within msyB at 598.679 kb on - strand, within msyB at 598.679 kb on - strand, within msyB at 598.810 kb on - strand, within msyB at 598.833 kb on + strand, within msyB at 598.833 kb on + strand, within msyB at 598.834 kb on - strand, within msyB at 598.834 kb on - strand, within msyB at 598.834 kb on - strand, within msyB at 598.878 kb on + strand, within msyB at 598.878 kb on + strand, within msyB at 598.878 kb on + strand, within msyB at 598.879 kb on - strand, within msyB at 598.879 kb on - strand, within msyB at 598.891 kb on - strand, within msyB at 599.000 kb on - strand at 599.061 kb on + strand at 599.086 kb on - strand at 599.092 kb on - strand at 599.153 kb on + strand at 599.153 kb on + strand at 599.153 kb on + strand at 599.252 kb on + strand, within satP at 599.253 kb on - strand, within satP at 599.253 kb on - strand, within satP
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 597,492 - -0.5 597,492 - -1.5 597,521 - -1.5 597,595 + -0.0 597,596 - -1.2 597,596 - -0.1 597,596 - -0.5 597,596 - -0.3 597,672 + +0.1 597,672 + +0.8 597,673 - -0.8 597,673 - +0.2 597,673 - -1.7 597,673 - -0.1 597,712 - -0.3 597,714 - +0.8 597,714 - +0.8 597,800 + +0.5 597,800 + -0.5 597,801 - -0.1 597,805 + -1.3 597,825 - -0.2 597,837 + -0.9 597,837 + +0.4 597,927 + yaaI NOLOHH_03390 0.19 -0.4 597,928 - yaaI NOLOHH_03390 0.19 +0.5 598,013 + yaaI NOLOHH_03390 0.40 -0.3 598,013 + yaaI NOLOHH_03390 0.40 -0.0 598,014 - yaaI NOLOHH_03390 0.40 -1.4 598,115 + yaaI NOLOHH_03390 0.65 +0.6 598,116 - yaaI NOLOHH_03390 0.66 -0.0 598,116 - yaaI NOLOHH_03390 0.66 +0.4 598,150 - yaaI NOLOHH_03390 0.74 -0.4 598,150 - yaaI NOLOHH_03390 0.74 -0.8 598,167 + yaaI NOLOHH_03390 0.78 +1.2 598,168 - yaaI NOLOHH_03390 0.79 -0.0 598,204 - yaaI NOLOHH_03390 0.87 +2.5 598,204 - yaaI NOLOHH_03390 0.87 +0.3 598,209 + yaaI NOLOHH_03390 0.89 +0.1 598,265 + -0.5 598,265 + -1.8 598,265 + -0.1 598,266 - -0.9 598,288 + +0.8 598,288 + +0.6 598,288 + +0.2 598,289 - -2.0 598,289 - -0.5 598,292 + -1.1 598,293 - +0.0 598,293 - +0.6 598,373 - msyB NOLOHH_03395 0.13 -0.7 598,404 + msyB NOLOHH_03395 0.17 -1.3 598,404 + msyB NOLOHH_03395 0.17 -0.1 598,405 - msyB NOLOHH_03395 0.18 -0.0 598,488 + msyB NOLOHH_03395 0.29 +0.7 598,488 + msyB NOLOHH_03395 0.29 +0.6 598,489 - msyB NOLOHH_03395 0.29 +0.5 598,510 + msyB NOLOHH_03395 0.32 -0.0 598,544 + msyB NOLOHH_03395 0.37 -0.5 598,607 - msyB NOLOHH_03395 0.46 +2.1 598,607 - msyB NOLOHH_03395 0.46 -1.3 598,663 + msyB NOLOHH_03395 0.54 +0.0 598,678 + msyB NOLOHH_03395 0.56 -0.3 598,678 + msyB NOLOHH_03395 0.56 +0.2 598,678 + msyB NOLOHH_03395 0.56 +0.9 598,678 + msyB NOLOHH_03395 0.56 -0.5 598,678 + msyB NOLOHH_03395 0.56 +0.3 598,678 + msyB NOLOHH_03395 0.56 +1.1 598,679 - msyB NOLOHH_03395 0.56 -0.5 598,679 - msyB NOLOHH_03395 0.56 -2.1 598,679 - msyB NOLOHH_03395 0.56 +1.2 598,679 - msyB NOLOHH_03395 0.56 -1.1 598,679 - msyB NOLOHH_03395 0.56 +0.1 598,679 - msyB NOLOHH_03395 0.56 -0.1 598,679 - msyB NOLOHH_03395 0.56 -0.2 598,810 - msyB NOLOHH_03395 0.74 +1.1 598,833 + msyB NOLOHH_03395 0.77 -0.0 598,833 + msyB NOLOHH_03395 0.77 +0.3 598,834 - msyB NOLOHH_03395 0.78 -0.2 598,834 - msyB NOLOHH_03395 0.78 -1.1 598,834 - msyB NOLOHH_03395 0.78 -0.1 598,878 + msyB NOLOHH_03395 0.84 -0.5 598,878 + msyB NOLOHH_03395 0.84 +1.4 598,878 + msyB NOLOHH_03395 0.84 -0.5 598,879 - msyB NOLOHH_03395 0.84 -0.9 598,879 - msyB NOLOHH_03395 0.84 -0.5 598,891 - msyB NOLOHH_03395 0.86 +0.5 599,000 - +0.5 599,061 + +1.7 599,086 - +0.3 599,092 - +2.5 599,153 + +0.2 599,153 + -1.5 599,153 + +0.5 599,252 + satP NOLOHH_03400 0.19 -0.5 599,253 - satP NOLOHH_03400 0.20 -1.1 599,253 - satP NOLOHH_03400 0.20 +0.4
Or see this region's nucleotide sequence