Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dnaJ and dnaK are separated by 88 nucleotides dnaK and yaaI are separated by 377 nucleotides yaaI and msyB are separated by 25 nucleotides
NOLOHH_03375: dnaJ - molecular chaperone DnaJ, at 594,337 to 595,467
dnaJ
NOLOHH_03385: dnaK - molecular chaperone DnaK, at 595,556 to 597,472
dnaK
NOLOHH_03390: yaaI - DUF2541 domain-containing protein, at 597,850 to 598,254
yaaI
NOLOHH_03395: msyB - acidic protein MsyB, at 598,280 to 598,993
msyB
Position (kb) 595
596
597
598 Strain fitness (log2 ratio) -2
-1
0
1
2 at 595.272 kb on - strand, within dnaJ at 595.308 kb on - strand, within dnaJ at 595.327 kb on - strand, within dnaJ at 595.533 kb on - strand at 595.535 kb on - strand at 595.535 kb on - strand at 595.535 kb on - strand at 595.535 kb on - strand at 595.535 kb on - strand at 595.535 kb on - strand at 595.539 kb on - strand at 595.547 kb on - strand at 595.875 kb on - strand, within dnaK at 595.892 kb on - strand, within dnaK at 597.492 kb on - strand at 597.492 kb on - strand at 597.521 kb on - strand at 597.595 kb on + strand at 597.596 kb on - strand at 597.596 kb on - strand at 597.596 kb on - strand at 597.596 kb on - strand at 597.672 kb on + strand at 597.672 kb on + strand at 597.673 kb on - strand at 597.673 kb on - strand at 597.673 kb on - strand at 597.673 kb on - strand at 597.712 kb on - strand at 597.714 kb on - strand at 597.714 kb on - strand at 597.800 kb on + strand at 597.800 kb on + strand at 597.801 kb on - strand at 597.805 kb on + strand at 597.825 kb on - strand at 597.837 kb on + strand at 597.837 kb on + strand at 597.927 kb on + strand, within yaaI at 597.928 kb on - strand, within yaaI at 598.013 kb on + strand, within yaaI at 598.013 kb on + strand, within yaaI at 598.014 kb on - strand, within yaaI at 598.115 kb on + strand, within yaaI at 598.116 kb on - strand, within yaaI at 598.116 kb on - strand, within yaaI at 598.150 kb on - strand, within yaaI at 598.150 kb on - strand, within yaaI at 598.167 kb on + strand, within yaaI at 598.168 kb on - strand, within yaaI at 598.204 kb on - strand, within yaaI at 598.204 kb on - strand, within yaaI at 598.209 kb on + strand, within yaaI at 598.265 kb on + strand at 598.265 kb on + strand at 598.265 kb on + strand at 598.266 kb on - strand at 598.288 kb on + strand at 598.288 kb on + strand at 598.288 kb on + strand at 598.289 kb on - strand at 598.289 kb on - strand at 598.292 kb on + strand at 598.293 kb on - strand at 598.293 kb on - strand at 598.373 kb on - strand, within msyB at 598.404 kb on + strand, within msyB at 598.404 kb on + strand, within msyB at 598.405 kb on - strand, within msyB
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 595,272 - dnaJ NOLOHH_03375 0.83 -1.5 595,308 - dnaJ NOLOHH_03375 0.86 +0.9 595,327 - dnaJ NOLOHH_03375 0.88 -0.5 595,533 - +0.6 595,535 - -0.3 595,535 - +0.7 595,535 - -0.3 595,535 - -0.3 595,535 - -0.3 595,535 - -1.1 595,539 - -0.5 595,547 - +0.3 595,875 - dnaK NOLOHH_03385 0.17 +0.5 595,892 - dnaK NOLOHH_03385 0.18 +2.5 597,492 - -0.5 597,492 - -1.5 597,521 - -1.5 597,595 + -0.0 597,596 - -1.2 597,596 - -0.1 597,596 - -0.5 597,596 - -0.3 597,672 + +0.1 597,672 + +0.8 597,673 - -0.8 597,673 - +0.2 597,673 - -1.7 597,673 - -0.1 597,712 - -0.3 597,714 - +0.8 597,714 - +0.8 597,800 + +0.5 597,800 + -0.5 597,801 - -0.1 597,805 + -1.3 597,825 - -0.2 597,837 + -0.9 597,837 + +0.4 597,927 + yaaI NOLOHH_03390 0.19 -0.4 597,928 - yaaI NOLOHH_03390 0.19 +0.5 598,013 + yaaI NOLOHH_03390 0.40 -0.3 598,013 + yaaI NOLOHH_03390 0.40 -0.0 598,014 - yaaI NOLOHH_03390 0.40 -1.4 598,115 + yaaI NOLOHH_03390 0.65 +0.6 598,116 - yaaI NOLOHH_03390 0.66 -0.0 598,116 - yaaI NOLOHH_03390 0.66 +0.4 598,150 - yaaI NOLOHH_03390 0.74 -0.4 598,150 - yaaI NOLOHH_03390 0.74 -0.8 598,167 + yaaI NOLOHH_03390 0.78 +1.2 598,168 - yaaI NOLOHH_03390 0.79 -0.0 598,204 - yaaI NOLOHH_03390 0.87 +2.5 598,204 - yaaI NOLOHH_03390 0.87 +0.3 598,209 + yaaI NOLOHH_03390 0.89 +0.1 598,265 + -0.5 598,265 + -1.8 598,265 + -0.1 598,266 - -0.9 598,288 + +0.8 598,288 + +0.6 598,288 + +0.2 598,289 - -2.0 598,289 - -0.5 598,292 + -1.1 598,293 - +0.0 598,293 - +0.6 598,373 - msyB NOLOHH_03395 0.13 -0.7 598,404 + msyB NOLOHH_03395 0.17 -1.3 598,404 + msyB NOLOHH_03395 0.17 -0.1 598,405 - msyB NOLOHH_03395 0.18 -0.0
Or see this region's nucleotide sequence