Strain Fitness in Escherichia coli ECOR27 around NOLOHH_01995
Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bas09 |
---|---|---|---|---|---|
remove | |||||
305,640 | + | ecpC | NOLOHH_01990 | 0.61 | +0.9 |
305,641 | - | ecpC | NOLOHH_01990 | 0.61 | +0.4 |
305,641 | - | ecpC | NOLOHH_01990 | 0.61 | -0.6 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | +1.7 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | +0.4 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | -0.0 |
305,643 | + | ecpC | NOLOHH_01990 | 0.61 | -2.6 |
305,644 | - | ecpC | NOLOHH_01990 | 0.61 | +0.3 |
305,644 | - | ecpC | NOLOHH_01990 | 0.61 | -0.4 |
305,644 | - | ecpC | NOLOHH_01990 | 0.61 | -2.3 |
305,655 | + | ecpC | NOLOHH_01990 | 0.62 | +0.4 |
305,655 | + | ecpC | NOLOHH_01990 | 0.62 | +0.4 |
305,656 | - | ecpC | NOLOHH_01990 | 0.62 | -0.7 |
305,670 | + | ecpC | NOLOHH_01990 | 0.62 | -0.2 |
305,718 | + | ecpC | NOLOHH_01990 | 0.64 | +1.3 |
305,718 | + | ecpC | NOLOHH_01990 | 0.64 | +0.9 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | +0.4 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -1.6 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | +0.4 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | +0.3 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -0.6 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -0.0 |
305,754 | + | ecpC | NOLOHH_01990 | 0.65 | -1.2 |
305,755 | - | ecpC | NOLOHH_01990 | 0.65 | +1.0 |
305,755 | - | ecpC | NOLOHH_01990 | 0.65 | +2.8 |
305,755 | - | ecpC | NOLOHH_01990 | 0.65 | -0.6 |
305,757 | - | ecpC | NOLOHH_01990 | 0.66 | -0.3 |
305,757 | - | ecpC | NOLOHH_01990 | 0.66 | +1.4 |
305,776 | + | ecpC | NOLOHH_01990 | 0.66 | -0.4 |
305,823 | + | ecpC | NOLOHH_01990 | 0.68 | +1.4 |
305,823 | + | ecpC | NOLOHH_01990 | 0.68 | +1.8 |
305,949 | + | ecpC | NOLOHH_01990 | 0.73 | +1.4 |
305,949 | + | ecpC | NOLOHH_01990 | 0.73 | +0.3 |
305,950 | - | ecpC | NOLOHH_01990 | 0.73 | +0.1 |
305,950 | - | ecpC | NOLOHH_01990 | 0.73 | +0.2 |
306,012 | + | ecpC | NOLOHH_01990 | 0.76 | +0.4 |
306,107 | - | ecpC | NOLOHH_01990 | 0.79 | +1.1 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +1.3 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.4 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -1.2 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -3.2 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.3 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.3 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | -0.3 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +0.3 |
306,185 | + | ecpC | NOLOHH_01990 | 0.83 | +0.4 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | -1.3 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | -0.6 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | +3.0 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | +0.4 |
306,186 | - | ecpC | NOLOHH_01990 | 0.83 | -0.6 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | -0.3 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | +1.0 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | +1.3 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | -0.2 |
306,190 | - | ecpC | NOLOHH_01990 | 0.83 | +0.4 |
306,207 | + | ecpC | NOLOHH_01990 | 0.83 | +0.2 |
306,208 | - | ecpC | NOLOHH_01990 | 0.83 | +0.4 |
306,216 | + | ecpC | NOLOHH_01990 | 0.84 | +1.4 |
306,216 | + | ecpC | NOLOHH_01990 | 0.84 | +0.8 |
306,217 | - | ecpC | NOLOHH_01990 | 0.84 | +0.2 |
306,217 | - | ecpC | NOLOHH_01990 | 0.84 | +1.8 |
306,259 | - | ecpC | NOLOHH_01990 | 0.85 | +0.0 |
306,401 | + | -0.2 | |||
306,468 | + | +0.1 | |||
306,489 | + | +0.4 | |||
306,500 | + | +0.3 | |||
306,501 | - | -0.7 | |||
306,829 | + | ecpD | NOLOHH_01995 | 0.13 | +0.1 |
306,830 | - | ecpD | NOLOHH_01995 | 0.13 | -0.7 |
306,830 | - | ecpD | NOLOHH_01995 | 0.13 | +0.0 |
306,830 | - | ecpD | NOLOHH_01995 | 0.13 | +2.0 |
306,850 | + | ecpD | NOLOHH_01995 | 0.14 | +0.0 |
306,850 | + | ecpD | NOLOHH_01995 | 0.14 | -0.3 |
306,851 | - | ecpD | NOLOHH_01995 | 0.14 | +0.4 |
306,868 | + | ecpD | NOLOHH_01995 | 0.15 | +0.9 |
306,869 | - | ecpD | NOLOHH_01995 | 0.15 | +0.4 |
306,899 | - | ecpD | NOLOHH_01995 | 0.17 | +0.1 |
306,900 | + | ecpD | NOLOHH_01995 | 0.17 | -1.6 |
306,901 | - | ecpD | NOLOHH_01995 | 0.17 | +0.6 |
306,901 | - | ecpD | NOLOHH_01995 | 0.17 | +0.9 |
306,918 | + | ecpD | NOLOHH_01995 | 0.18 | -1.6 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +0.7 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +0.1 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +1.3 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +0.9 |
306,919 | - | ecpD | NOLOHH_01995 | 0.18 | +0.4 |
306,953 | + | ecpD | NOLOHH_01995 | 0.20 | -1.7 |
306,990 | + | ecpD | NOLOHH_01995 | 0.23 | +0.2 |
306,993 | + | ecpD | NOLOHH_01995 | 0.23 | +0.4 |
306,994 | - | ecpD | NOLOHH_01995 | 0.23 | -0.9 |
306,994 | - | ecpD | NOLOHH_01995 | 0.23 | +0.0 |
307,008 | + | ecpD | NOLOHH_01995 | 0.24 | +1.2 |
307,009 | - | ecpD | NOLOHH_01995 | 0.24 | +0.1 |
307,143 | + | ecpD | NOLOHH_01995 | 0.32 | +0.1 |
307,143 | + | ecpD | NOLOHH_01995 | 0.32 | -0.1 |
307,144 | - | ecpD | NOLOHH_01995 | 0.32 | +0.0 |
307,180 | + | ecpD | NOLOHH_01995 | 0.34 | -0.4 |
307,181 | - | ecpD | NOLOHH_01995 | 0.34 | -0.5 |
307,181 | - | ecpD | NOLOHH_01995 | 0.34 | -0.5 |
307,181 | - | ecpD | NOLOHH_01995 | 0.34 | -1.1 |
307,231 | + | ecpD | NOLOHH_01995 | 0.37 | +1.0 |
307,231 | + | ecpD | NOLOHH_01995 | 0.37 | +0.4 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | -0.1 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | +0.0 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | -1.0 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | +1.2 |
307,232 | - | ecpD | NOLOHH_01995 | 0.37 | +0.7 |
307,277 | + | ecpD | NOLOHH_01995 | 0.40 | +0.1 |
307,278 | - | ecpD | NOLOHH_01995 | 0.40 | -1.3 |
307,278 | - | ecpD | NOLOHH_01995 | 0.40 | -0.6 |
307,282 | - | ecpD | NOLOHH_01995 | 0.41 | -3.3 |
307,302 | - | ecpD | NOLOHH_01995 | 0.42 | -0.6 |
307,302 | - | ecpD | NOLOHH_01995 | 0.42 | +0.8 |
307,306 | - | ecpD | NOLOHH_01995 | 0.42 | -0.6 |
307,385 | + | ecpD | NOLOHH_01995 | 0.47 | -0.1 |
307,386 | - | ecpD | NOLOHH_01995 | 0.47 | +0.0 |
307,392 | + | ecpD | NOLOHH_01995 | 0.47 | -1.6 |
307,393 | - | ecpD | NOLOHH_01995 | 0.47 | -0.6 |
307,393 | - | ecpD | NOLOHH_01995 | 0.47 | -0.2 |
307,393 | - | ecpD | NOLOHH_01995 | 0.47 | -1.4 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | -0.3 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | -1.8 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | +0.8 |
307,405 | + | ecpD | NOLOHH_01995 | 0.48 | -0.9 |
307,406 | - | ecpD | NOLOHH_01995 | 0.48 | -0.4 |
307,406 | - | ecpD | NOLOHH_01995 | 0.48 | +0.2 |
307,406 | - | ecpD | NOLOHH_01995 | 0.48 | +0.0 |
307,446 | + | ecpD | NOLOHH_01995 | 0.50 | -0.6 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | +0.1 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | +0.9 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | +0.4 |
307,447 | - | ecpD | NOLOHH_01995 | 0.51 | -0.8 |
307,448 | + | ecpD | NOLOHH_01995 | 0.51 | -0.1 |
307,448 | + | ecpD | NOLOHH_01995 | 0.51 | +0.8 |
307,449 | - | ecpD | NOLOHH_01995 | 0.51 | -2.4 |
307,449 | - | ecpD | NOLOHH_01995 | 0.51 | +0.0 |
307,495 | + | ecpD | NOLOHH_01995 | 0.53 | +0.1 |
307,496 | - | ecpD | NOLOHH_01995 | 0.54 | +0.2 |
307,555 | + | ecpD | NOLOHH_01995 | 0.57 | +2.4 |
307,555 | + | ecpD | NOLOHH_01995 | 0.57 | +0.8 |
307,555 | + | ecpD | NOLOHH_01995 | 0.57 | +0.2 |
307,556 | - | ecpD | NOLOHH_01995 | 0.57 | +0.4 |
307,556 | - | ecpD | NOLOHH_01995 | 0.57 | -0.2 |
307,558 | + | ecpD | NOLOHH_01995 | 0.57 | +0.4 |
307,558 | + | ecpD | NOLOHH_01995 | 0.57 | +0.3 |
307,559 | - | ecpD | NOLOHH_01995 | 0.57 | +0.2 |
307,559 | - | ecpD | NOLOHH_01995 | 0.57 | -2.2 |
307,559 | - | ecpD | NOLOHH_01995 | 0.57 | +2.4 |
307,594 | + | ecpD | NOLOHH_01995 | 0.59 | +1.2 |
307,595 | - | ecpD | NOLOHH_01995 | 0.60 | +0.1 |
307,667 | + | ecpD | NOLOHH_01995 | 0.64 | -0.6 |
307,667 | + | ecpD | NOLOHH_01995 | 0.64 | +2.0 |
307,715 | - | ecpD | NOLOHH_01995 | 0.67 | +1.1 |
307,725 | + | ecpD | NOLOHH_01995 | 0.67 | +0.5 |
307,770 | + | ecpD | NOLOHH_01995 | 0.70 | -0.8 |
307,774 | - | ecpD | NOLOHH_01995 | 0.70 | +0.7 |
307,774 | - | ecpD | NOLOHH_01995 | 0.70 | +0.6 |
307,786 | + | ecpD | NOLOHH_01995 | 0.71 | -0.2 |
307,786 | + | ecpD | NOLOHH_01995 | 0.71 | +0.2 |
307,786 | + | ecpD | NOLOHH_01995 | 0.71 | -0.3 |
307,786 | + | ecpD | NOLOHH_01995 | 0.71 | -0.6 |
307,787 | - | ecpD | NOLOHH_01995 | 0.71 | +0.4 |
307,788 | + | ecpD | NOLOHH_01995 | 0.71 | -0.4 |
307,789 | - | ecpD | NOLOHH_01995 | 0.71 | +1.6 |
307,814 | - | ecpD | NOLOHH_01995 | 0.73 | -1.7 |
307,852 | - | ecpD | NOLOHH_01995 | 0.75 | -0.4 |
307,857 | - | ecpD | NOLOHH_01995 | 0.75 | +0.8 |
307,936 | + | ecpD | NOLOHH_01995 | 0.80 | -0.4 |
307,936 | + | ecpD | NOLOHH_01995 | 0.80 | +0.5 |
307,936 | + | ecpD | NOLOHH_01995 | 0.80 | -1.7 |
307,936 | + | ecpD | NOLOHH_01995 | 0.80 | +0.6 |
307,937 | - | ecpD | NOLOHH_01995 | 0.80 | -2.4 |
307,974 | - | ecpD | NOLOHH_01995 | 0.83 | +1.4 |
307,998 | + | ecpD | NOLOHH_01995 | 0.84 | +0.4 |
307,998 | + | ecpD | NOLOHH_01995 | 0.84 | -0.6 |
307,998 | + | ecpD | NOLOHH_01995 | 0.84 | -0.9 |
307,998 | + | ecpD | NOLOHH_01995 | 0.84 | +0.4 |
307,999 | - | ecpD | NOLOHH_01995 | 0.84 | +0.6 |
308,016 | + | ecpD | NOLOHH_01995 | 0.85 | -0.0 |
308,026 | + | ecpD | NOLOHH_01995 | 0.86 | +0.7 |
308,027 | - | ecpD | NOLOHH_01995 | 0.86 | +0.4 |
308,027 | - | ecpD | NOLOHH_01995 | 0.86 | -0.2 |
308,027 | - | ecpD | NOLOHH_01995 | 0.86 | -0.6 |
308,046 | + | ecpD | NOLOHH_01995 | 0.87 | -0.3 |
308,058 | + | ecpD | NOLOHH_01995 | 0.88 | -2.6 |
308,097 | + | +0.6 | |||
308,098 | - | +0.4 | |||
308,098 | - | +0.8 | |||
308,175 | + | -0.2 | |||
308,180 | + | -0.8 | |||
308,253 | + | -0.2 | |||
308,253 | + | -1.2 | |||
308,258 | - | -0.2 | |||
308,282 | - | +1.4 | |||
308,377 | + | ecpE | NOLOHH_02000 | 0.21 | -1.6 |
308,399 | + | ecpE | NOLOHH_02000 | 0.24 | +0.7 |
308,399 | + | ecpE | NOLOHH_02000 | 0.24 | -0.2 |
308,399 | + | ecpE | NOLOHH_02000 | 0.24 | +1.2 |
308,399 | + | ecpE | NOLOHH_02000 | 0.24 | -0.5 |
308,399 | + | ecpE | NOLOHH_02000 | 0.24 | +0.7 |
308,399 | + | ecpE | NOLOHH_02000 | 0.24 | +1.4 |
308,400 | - | ecpE | NOLOHH_02000 | 0.24 | -0.6 |
308,419 | + | ecpE | NOLOHH_02000 | 0.27 | -0.6 |
308,531 | + | ecpE | NOLOHH_02000 | 0.43 | +0.4 |
308,534 | + | ecpE | NOLOHH_02000 | 0.43 | +0.4 |
308,534 | + | ecpE | NOLOHH_02000 | 0.43 | +1.0 |
308,614 | + | ecpE | NOLOHH_02000 | 0.54 | -1.2 |
308,677 | - | ecpE | NOLOHH_02000 | 0.63 | +0.7 |
308,677 | - | ecpE | NOLOHH_02000 | 0.63 | +0.8 |
308,698 | + | ecpE | NOLOHH_02000 | 0.66 | -0.2 |
308,699 | - | ecpE | NOLOHH_02000 | 0.66 | +0.4 |
308,731 | - | ecpE | NOLOHH_02000 | 0.71 | +1.0 |
308,734 | + | ecpE | NOLOHH_02000 | 0.71 | +0.4 |
308,734 | + | ecpE | NOLOHH_02000 | 0.71 | -0.3 |
308,734 | + | ecpE | NOLOHH_02000 | 0.71 | +1.4 |
308,735 | - | ecpE | NOLOHH_02000 | 0.71 | +1.6 |
308,755 | + | ecpE | NOLOHH_02000 | 0.74 | +0.8 |
308,756 | - | ecpE | NOLOHH_02000 | 0.74 | -1.3 |
308,756 | - | ecpE | NOLOHH_02000 | 0.74 | +0.1 |
308,760 | + | ecpE | NOLOHH_02000 | 0.75 | -0.6 |
308,811 | - | ecpE | NOLOHH_02000 | 0.82 | -0.7 |
308,811 | - | ecpE | NOLOHH_02000 | 0.82 | +0.4 |
308,814 | + | ecpE | NOLOHH_02000 | 0.82 | -0.6 |
308,814 | + | ecpE | NOLOHH_02000 | 0.82 | +0.7 |
308,814 | + | ecpE | NOLOHH_02000 | 0.82 | +0.8 |
308,815 | - | ecpE | NOLOHH_02000 | 0.83 | -0.1 |
308,815 | - | ecpE | NOLOHH_02000 | 0.83 | +1.8 |
308,815 | - | ecpE | NOLOHH_02000 | 0.83 | +0.4 |
308,815 | - | ecpE | NOLOHH_02000 | 0.83 | +0.2 |
308,867 | + | ecpE | NOLOHH_02000 | 0.90 | +1.8 |
308,876 | + | +2.0 | |||
308,943 | + | +1.2 | |||
309,017 | + | -0.1 | |||
309,018 | - | +0.8 | |||
309,018 | - | +1.2 | |||
309,045 | - | -1.6 | |||
309,045 | - | +0.0 | |||
309,045 | - | -1.3 | |||
309,055 | + | +0.6 | |||
309,080 | - | +1.4 | |||
309,106 | + | +0.1 | |||
309,107 | - | -1.0 | |||
309,117 | + | +1.3 | |||
309,117 | + | -0.1 | |||
309,118 | - | -0.1 | |||
309,120 | + | +0.4 | |||
309,124 | + | -0.7 | |||
309,198 | + | +0.1 | |||
309,198 | + | +0.4 | |||
309,198 | + | +0.0 | |||
309,198 | + | -0.1 | |||
309,199 | - | +0.4 | |||
309,199 | - | -0.4 | |||
309,199 | - | +0.2 | |||
309,199 | - | -0.2 | |||
309,202 | + | -0.6 | |||
309,202 | + | +0.4 | |||
309,202 | + | +0.4 | |||
309,203 | - | +0.6 | |||
309,203 | - | +0.4 | |||
309,210 | - | -0.0 | |||
309,210 | - | -0.4 | |||
309,210 | - | -0.6 | |||
309,251 | - | +1.0 |
Or see this region's nucleotide sequence