Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yahG and yahF overlap by 1 nucleotides yahF and yahE overlap by 11 nucleotides yahE and yahD are separated by 39 nucleotides
NOLOHH_01845: yahG - Uncharacterized protein YahG, at 266,728 to 268,146
yahG
NOLOHH_01850: yahF - Uncharacterized protein YahF, at 268,146 to 269,693
yahF
NOLOHH_01855: yahE - Uncharacterized protein YahE, at 269,683 to 270,546
yahE
NOLOHH_01860: yahD - Putative ankyrin repeat protein YahD, at 270,586 to 271,191
yahD
Position (kb) 268
269
270 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 267.270 kb on + strand, within yahG at 267.271 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.303 kb on - strand, within yahG at 267.460 kb on + strand, within yahG at 267.461 kb on - strand, within yahG at 267.600 kb on + strand, within yahG at 267.600 kb on + strand, within yahG at 267.600 kb on + strand, within yahG at 267.601 kb on - strand, within yahG at 267.601 kb on - strand, within yahG at 267.606 kb on + strand, within yahG at 267.606 kb on + strand, within yahG at 267.607 kb on - strand, within yahG at 267.607 kb on - strand, within yahG at 267.607 kb on - strand, within yahG at 267.608 kb on + strand, within yahG at 267.609 kb on - strand, within yahG at 267.609 kb on - strand, within yahG at 267.609 kb on - strand, within yahG at 267.649 kb on - strand, within yahG at 268.017 kb on + strand at 268.060 kb on + strand at 268.060 kb on + strand at 268.060 kb on + strand at 268.061 kb on - strand at 268.061 kb on - strand at 268.107 kb on + strand at 268.110 kb on + strand at 268.111 kb on - strand at 268.255 kb on - strand at 268.255 kb on - strand at 268.288 kb on + strand at 268.288 kb on + strand at 268.288 kb on + strand at 268.289 kb on - strand at 268.550 kb on + strand, within yahF at 268.591 kb on + strand, within yahF at 268.591 kb on + strand, within yahF at 268.665 kb on + strand, within yahF at 268.665 kb on + strand, within yahF at 268.665 kb on + strand, within yahF at 268.665 kb on + strand, within yahF at 268.665 kb on + strand, within yahF at 268.666 kb on - strand, within yahF at 268.666 kb on - strand, within yahF at 268.666 kb on - strand, within yahF at 268.666 kb on - strand, within yahF at 268.669 kb on + strand, within yahF at 268.669 kb on + strand, within yahF at 268.670 kb on - strand, within yahF at 268.728 kb on - strand, within yahF at 268.898 kb on + strand, within yahF at 268.932 kb on - strand, within yahF at 268.932 kb on - strand, within yahF at 268.932 kb on - strand, within yahF at 269.352 kb on - strand, within yahF at 269.480 kb on + strand, within yahF at 269.481 kb on - strand, within yahF at 269.616 kb on - strand at 269.616 kb on - strand at 269.634 kb on - strand at 269.660 kb on - strand at 269.664 kb on - strand at 269.706 kb on - strand at 269.742 kb on - strand at 269.824 kb on - strand, within yahE at 270.070 kb on - strand, within yahE at 270.296 kb on - strand, within yahE at 270.296 kb on - strand, within yahE at 270.297 kb on + strand, within yahE at 270.298 kb on - strand, within yahE at 270.462 kb on + strand at 270.467 kb on - strand at 270.467 kb on - strand at 270.587 kb on + strand at 270.588 kb on - strand at 270.588 kb on - strand at 270.588 kb on - strand at 270.588 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 267,270 + yahG NOLOHH_01845 0.38 +0.8 267,271 - yahG NOLOHH_01845 0.38 +1.1 267,303 - yahG NOLOHH_01845 0.41 +0.7 267,303 - yahG NOLOHH_01845 0.41 +1.8 267,303 - yahG NOLOHH_01845 0.41 -1.9 267,303 - yahG NOLOHH_01845 0.41 +0.3 267,460 + yahG NOLOHH_01845 0.52 +0.1 267,461 - yahG NOLOHH_01845 0.52 +0.0 267,600 + yahG NOLOHH_01845 0.61 +0.1 267,600 + yahG NOLOHH_01845 0.61 +0.8 267,600 + yahG NOLOHH_01845 0.61 +0.5 267,601 - yahG NOLOHH_01845 0.62 -0.3 267,601 - yahG NOLOHH_01845 0.62 -1.2 267,606 + yahG NOLOHH_01845 0.62 +1.8 267,606 + yahG NOLOHH_01845 0.62 -0.4 267,607 - yahG NOLOHH_01845 0.62 -1.2 267,607 - yahG NOLOHH_01845 0.62 -1.9 267,607 - yahG NOLOHH_01845 0.62 -0.3 267,608 + yahG NOLOHH_01845 0.62 -1.0 267,609 - yahG NOLOHH_01845 0.62 -0.3 267,609 - yahG NOLOHH_01845 0.62 +0.3 267,609 - yahG NOLOHH_01845 0.62 +0.3 267,649 - yahG NOLOHH_01845 0.65 -0.1 268,017 + +2.2 268,060 + +1.0 268,060 + -3.2 268,060 + +2.4 268,061 - +0.1 268,061 - +0.4 268,107 + -1.6 268,110 + -0.9 268,111 - +0.3 268,255 - -0.2 268,255 - -0.1 268,288 + -0.1 268,288 + -0.2 268,288 + +1.4 268,289 - +0.9 268,550 + yahF NOLOHH_01850 0.26 -0.0 268,591 + yahF NOLOHH_01850 0.29 +0.3 268,591 + yahF NOLOHH_01850 0.29 +0.1 268,665 + yahF NOLOHH_01850 0.34 -0.6 268,665 + yahF NOLOHH_01850 0.34 +2.4 268,665 + yahF NOLOHH_01850 0.34 +0.4 268,665 + yahF NOLOHH_01850 0.34 +1.3 268,665 + yahF NOLOHH_01850 0.34 -0.6 268,666 - yahF NOLOHH_01850 0.34 -0.2 268,666 - yahF NOLOHH_01850 0.34 +0.4 268,666 - yahF NOLOHH_01850 0.34 -0.5 268,666 - yahF NOLOHH_01850 0.34 -0.6 268,669 + yahF NOLOHH_01850 0.34 -0.7 268,669 + yahF NOLOHH_01850 0.34 -0.1 268,670 - yahF NOLOHH_01850 0.34 +2.8 268,728 - yahF NOLOHH_01850 0.38 +0.2 268,898 + yahF NOLOHH_01850 0.49 -1.1 268,932 - yahF NOLOHH_01850 0.51 -1.2 268,932 - yahF NOLOHH_01850 0.51 -0.4 268,932 - yahF NOLOHH_01850 0.51 +0.2 269,352 - yahF NOLOHH_01850 0.78 -0.1 269,480 + yahF NOLOHH_01850 0.86 -0.3 269,481 - yahF NOLOHH_01850 0.86 +0.4 269,616 - +0.8 269,616 - +0.7 269,634 - +1.6 269,660 - -0.3 269,664 - +0.1 269,706 - +0.7 269,742 - -0.8 269,824 - yahE NOLOHH_01855 0.16 +0.4 270,070 - yahE NOLOHH_01855 0.45 -0.6 270,296 - yahE NOLOHH_01855 0.71 -0.6 270,296 - yahE NOLOHH_01855 0.71 -0.6 270,297 + yahE NOLOHH_01855 0.71 +0.1 270,298 - yahE NOLOHH_01855 0.71 +1.4 270,462 + +0.0 270,467 - +1.0 270,467 - +1.4 270,587 + +2.4 270,588 - +0.2 270,588 - +0.8 270,588 - -0.6 270,588 - -1.2
Or see this region's nucleotide sequence