Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tesA and ybbO are separated by 28 nucleotides ybbO and cnoX are separated by 60 nucleotides cnoX and fetB are separated by 62 nucleotides fetB and fetA overlap by 14 nucleotides
NOLOHH_00965: tesA - multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1, at 83,230 to 83,823
tesA
NOLOHH_00970: ybbO - NADP(+)-dependent aldehyde reductase, at 83,852 to 84,622
ybbO
NOLOHH_00975: cnoX - chaperedoxin, at 84,683 to 85,537
cnoX
NOLOHH_00980: fetB - iron export ABC transporter permease subunit FetB, at 85,600 to 86,379
fetB
NOLOHH_00985: fetA - iron ABC transporter ATP-binding protein FetA, at 86,366 to 87,043
fetA
Position (kb) 84
85
86 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 83.708 kb on - strand, within tesA at 83.708 kb on - strand, within tesA at 83.739 kb on + strand, within tesA at 83.740 kb on - strand, within tesA at 83.804 kb on + strand at 83.805 kb on - strand at 83.807 kb on + strand at 83.807 kb on + strand at 83.808 kb on - strand at 83.845 kb on + strand at 83.846 kb on - strand at 83.869 kb on - strand at 83.869 kb on - strand at 83.974 kb on + strand, within ybbO at 84.088 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.111 kb on - strand, within ybbO at 84.111 kb on - strand, within ybbO at 84.111 kb on - strand, within ybbO at 84.233 kb on - strand, within ybbO at 84.233 kb on - strand, within ybbO at 84.233 kb on - strand, within ybbO at 84.299 kb on - strand, within ybbO at 84.302 kb on + strand, within ybbO at 84.302 kb on + strand, within ybbO at 84.358 kb on + strand, within ybbO at 84.358 kb on + strand, within ybbO at 84.359 kb on - strand, within ybbO at 84.391 kb on + strand, within ybbO at 84.466 kb on + strand, within ybbO at 84.466 kb on + strand, within ybbO at 84.467 kb on - strand, within ybbO at 84.498 kb on + strand, within ybbO at 84.498 kb on + strand, within ybbO at 84.498 kb on + strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.511 kb on + strand, within ybbO at 84.512 kb on - strand, within ybbO at 84.564 kb on + strand at 84.609 kb on + strand at 84.610 kb on - strand at 84.719 kb on - strand at 84.767 kb on + strand at 84.836 kb on + strand, within cnoX at 84.836 kb on + strand, within cnoX at 84.836 kb on + strand, within cnoX at 84.836 kb on + strand, within cnoX at 84.837 kb on - strand, within cnoX at 84.926 kb on + strand, within cnoX at 84.927 kb on - strand, within cnoX at 85.070 kb on + strand, within cnoX at 85.414 kb on + strand, within cnoX at 85.505 kb on + strand at 85.520 kb on + strand at 85.520 kb on + strand at 85.520 kb on + strand at 85.521 kb on - strand at 85.521 kb on - strand at 85.521 kb on - strand at 85.532 kb on + strand at 85.532 kb on + strand at 85.532 kb on + strand at 85.532 kb on + strand at 85.533 kb on - strand at 85.533 kb on - strand at 85.533 kb on - strand at 85.538 kb on + strand at 85.645 kb on - strand at 85.647 kb on - strand at 85.654 kb on - strand at 85.659 kb on - strand at 85.668 kb on - strand at 85.711 kb on - strand, within fetB at 85.711 kb on - strand, within fetB at 85.711 kb on - strand, within fetB at 85.723 kb on - strand, within fetB at 85.731 kb on - strand, within fetB at 85.735 kb on - strand, within fetB at 85.765 kb on + strand, within fetB at 85.798 kb on + strand, within fetB at 85.835 kb on - strand, within fetB at 85.835 kb on - strand, within fetB at 85.945 kb on + strand, within fetB at 85.955 kb on + strand, within fetB at 86.119 kb on - strand, within fetB at 86.121 kb on - strand, within fetB at 86.121 kb on - strand, within fetB at 86.168 kb on - strand, within fetB at 86.179 kb on + strand, within fetB at 86.214 kb on - strand, within fetB at 86.236 kb on - strand, within fetB at 86.362 kb on - strand at 86.365 kb on - strand at 86.521 kb on + strand, within fetA at 86.528 kb on - strand, within fetA at 86.531 kb on - strand, within fetA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 83,708 - tesA NOLOHH_00965 0.80 +2.8 83,708 - tesA NOLOHH_00965 0.80 +0.5 83,739 + tesA NOLOHH_00965 0.86 +0.5 83,740 - tesA NOLOHH_00965 0.86 +0.3 83,804 + +0.1 83,805 - -0.5 83,807 + -0.0 83,807 + -0.2 83,808 - +0.9 83,845 + -0.7 83,846 - +1.5 83,869 - -0.3 83,869 - +0.1 83,974 + ybbO NOLOHH_00970 0.16 -0.1 84,088 + ybbO NOLOHH_00970 0.31 +1.5 84,110 + ybbO NOLOHH_00970 0.33 -0.1 84,110 + ybbO NOLOHH_00970 0.33 -1.1 84,110 + ybbO NOLOHH_00970 0.33 +0.7 84,110 + ybbO NOLOHH_00970 0.33 +0.1 84,110 + ybbO NOLOHH_00970 0.33 +0.6 84,111 - ybbO NOLOHH_00970 0.34 -1.0 84,111 - ybbO NOLOHH_00970 0.34 -1.4 84,111 - ybbO NOLOHH_00970 0.34 +0.0 84,233 - ybbO NOLOHH_00970 0.49 -1.1 84,233 - ybbO NOLOHH_00970 0.49 +0.8 84,233 - ybbO NOLOHH_00970 0.49 +1.3 84,299 - ybbO NOLOHH_00970 0.58 +0.5 84,302 + ybbO NOLOHH_00970 0.58 -1.1 84,302 + ybbO NOLOHH_00970 0.58 -1.9 84,358 + ybbO NOLOHH_00970 0.66 +0.9 84,358 + ybbO NOLOHH_00970 0.66 -1.1 84,359 - ybbO NOLOHH_00970 0.66 +0.5 84,391 + ybbO NOLOHH_00970 0.70 -0.5 84,466 + ybbO NOLOHH_00970 0.80 +1.9 84,466 + ybbO NOLOHH_00970 0.80 -1.1 84,467 - ybbO NOLOHH_00970 0.80 -0.1 84,498 + ybbO NOLOHH_00970 0.84 -0.1 84,498 + ybbO NOLOHH_00970 0.84 -0.5 84,498 + ybbO NOLOHH_00970 0.84 -0.6 84,499 - ybbO NOLOHH_00970 0.84 -0.5 84,499 - ybbO NOLOHH_00970 0.84 -0.3 84,499 - ybbO NOLOHH_00970 0.84 +0.2 84,499 - ybbO NOLOHH_00970 0.84 -1.0 84,511 + ybbO NOLOHH_00970 0.85 +1.5 84,512 - ybbO NOLOHH_00970 0.86 +0.2 84,564 + +0.2 84,609 + +0.2 84,610 - -1.0 84,719 - +1.5 84,767 + +2.0 84,836 + cnoX NOLOHH_00975 0.18 +0.5 84,836 + cnoX NOLOHH_00975 0.18 +0.5 84,836 + cnoX NOLOHH_00975 0.18 +1.5 84,836 + cnoX NOLOHH_00975 0.18 +0.5 84,837 - cnoX NOLOHH_00975 0.18 +0.2 84,926 + cnoX NOLOHH_00975 0.28 -0.5 84,927 - cnoX NOLOHH_00975 0.29 -0.5 85,070 + cnoX NOLOHH_00975 0.45 -0.6 85,414 + cnoX NOLOHH_00975 0.85 -0.9 85,505 + -1.3 85,520 + +1.3 85,520 + +1.2 85,520 + +0.5 85,521 - -0.1 85,521 - -0.2 85,521 - -0.2 85,532 + +0.7 85,532 + +0.2 85,532 + -0.3 85,532 + -0.5 85,533 - +0.9 85,533 - +1.2 85,533 - +1.0 85,538 + -0.8 85,645 - +0.5 85,647 - +1.3 85,654 - +0.8 85,659 - +0.0 85,668 - -0.5 85,711 - fetB NOLOHH_00980 0.14 +1.3 85,711 - fetB NOLOHH_00980 0.14 -1.5 85,711 - fetB NOLOHH_00980 0.14 +0.2 85,723 - fetB NOLOHH_00980 0.16 -0.1 85,731 - fetB NOLOHH_00980 0.17 +0.5 85,735 - fetB NOLOHH_00980 0.17 +0.5 85,765 + fetB NOLOHH_00980 0.21 +2.5 85,798 + fetB NOLOHH_00980 0.25 -0.1 85,835 - fetB NOLOHH_00980 0.30 -1.5 85,835 - fetB NOLOHH_00980 0.30 -0.1 85,945 + fetB NOLOHH_00980 0.44 +1.5 85,955 + fetB NOLOHH_00980 0.46 -0.5 86,119 - fetB NOLOHH_00980 0.67 -1.1 86,121 - fetB NOLOHH_00980 0.67 -0.8 86,121 - fetB NOLOHH_00980 0.67 +0.5 86,168 - fetB NOLOHH_00980 0.73 -0.5 86,179 + fetB NOLOHH_00980 0.74 -0.1 86,214 - fetB NOLOHH_00980 0.79 +0.2 86,236 - fetB NOLOHH_00980 0.82 -0.5 86,362 - -0.5 86,365 - +2.5 86,521 + fetA NOLOHH_00985 0.23 -0.1 86,528 - fetA NOLOHH_00985 0.24 +0.6 86,531 - fetA NOLOHH_00985 0.24 +1.0
Or see this region's nucleotide sequence