Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybbP and ybbA overlap by 4 nucleotides ybbA and tesA are separated by 0 nucleotides tesA and ybbO are separated by 28 nucleotides ybbO and cnoX are separated by 60 nucleotides
NOLOHH_00955: ybbP - Uncharacterized ABC transporter permease YbbP, at 80,132 to 82,546
ybbP
NOLOHH_00960: ybbA - ABC transporter ATP-binding protein, at 82,543 to 83,229
ybbA
NOLOHH_00965: tesA - multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1, at 83,230 to 83,823
tesA
NOLOHH_00970: ybbO - NADP(+)-dependent aldehyde reductase, at 83,852 to 84,622
ybbO
NOLOHH_00975: cnoX - chaperedoxin, at 84,683 to 85,537
cnoX
Position (kb) 83
84 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 82.230 kb on + strand, within ybbP at 82.235 kb on - strand, within ybbP at 82.235 kb on - strand, within ybbP at 82.235 kb on - strand, within ybbP at 82.482 kb on - strand at 82.680 kb on + strand, within ybbA at 82.828 kb on + strand, within ybbA at 82.873 kb on - strand, within ybbA at 83.001 kb on + strand, within ybbA at 83.002 kb on - strand, within ybbA at 83.004 kb on + strand, within ybbA at 83.004 kb on + strand, within ybbA at 83.004 kb on + strand, within ybbA at 83.004 kb on + strand, within ybbA at 83.004 kb on + strand, within ybbA at 83.004 kb on + strand, within ybbA at 83.004 kb on + strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.005 kb on - strand, within ybbA at 83.009 kb on - strand, within ybbA at 83.361 kb on + strand, within tesA at 83.361 kb on + strand, within tesA at 83.361 kb on + strand, within tesA at 83.384 kb on + strand, within tesA at 83.388 kb on + strand, within tesA at 83.388 kb on + strand, within tesA at 83.594 kb on + strand, within tesA at 83.594 kb on + strand, within tesA at 83.595 kb on - strand, within tesA at 83.595 kb on - strand, within tesA at 83.611 kb on + strand, within tesA at 83.611 kb on + strand, within tesA at 83.611 kb on + strand, within tesA at 83.612 kb on - strand, within tesA at 83.612 kb on - strand, within tesA at 83.612 kb on - strand, within tesA at 83.612 kb on - strand, within tesA at 83.612 kb on - strand, within tesA at 83.612 kb on - strand, within tesA at 83.623 kb on + strand, within tesA at 83.625 kb on + strand, within tesA at 83.625 kb on + strand, within tesA at 83.625 kb on + strand, within tesA at 83.626 kb on - strand, within tesA at 83.626 kb on - strand, within tesA at 83.626 kb on - strand, within tesA at 83.708 kb on - strand, within tesA at 83.708 kb on - strand, within tesA at 83.739 kb on + strand, within tesA at 83.740 kb on - strand, within tesA at 83.804 kb on + strand at 83.805 kb on - strand at 83.807 kb on + strand at 83.807 kb on + strand at 83.808 kb on - strand at 83.845 kb on + strand at 83.846 kb on - strand at 83.869 kb on - strand at 83.869 kb on - strand at 83.974 kb on + strand, within ybbO at 84.088 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.110 kb on + strand, within ybbO at 84.111 kb on - strand, within ybbO at 84.111 kb on - strand, within ybbO at 84.111 kb on - strand, within ybbO at 84.233 kb on - strand, within ybbO at 84.233 kb on - strand, within ybbO at 84.233 kb on - strand, within ybbO at 84.299 kb on - strand, within ybbO at 84.302 kb on + strand, within ybbO at 84.302 kb on + strand, within ybbO at 84.358 kb on + strand, within ybbO at 84.358 kb on + strand, within ybbO at 84.359 kb on - strand, within ybbO at 84.391 kb on + strand, within ybbO at 84.466 kb on + strand, within ybbO at 84.466 kb on + strand, within ybbO at 84.467 kb on - strand, within ybbO at 84.498 kb on + strand, within ybbO at 84.498 kb on + strand, within ybbO at 84.498 kb on + strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.499 kb on - strand, within ybbO at 84.511 kb on + strand, within ybbO at 84.512 kb on - strand, within ybbO at 84.564 kb on + strand at 84.609 kb on + strand at 84.610 kb on - strand at 84.719 kb on - strand at 84.767 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 82,230 + ybbP NOLOHH_00955 0.87 +0.9 82,235 - ybbP NOLOHH_00955 0.87 +0.3 82,235 - ybbP NOLOHH_00955 0.87 +0.1 82,235 - ybbP NOLOHH_00955 0.87 +0.7 82,482 - -0.3 82,680 + ybbA NOLOHH_00960 0.20 -2.1 82,828 + ybbA NOLOHH_00960 0.41 +0.5 82,873 - ybbA NOLOHH_00960 0.48 +0.7 83,001 + ybbA NOLOHH_00960 0.67 +1.5 83,002 - ybbA NOLOHH_00960 0.67 -0.1 83,004 + ybbA NOLOHH_00960 0.67 +0.5 83,004 + ybbA NOLOHH_00960 0.67 +0.9 83,004 + ybbA NOLOHH_00960 0.67 -0.4 83,004 + ybbA NOLOHH_00960 0.67 +0.2 83,004 + ybbA NOLOHH_00960 0.67 +0.5 83,004 + ybbA NOLOHH_00960 0.67 -0.4 83,004 + ybbA NOLOHH_00960 0.67 -0.1 83,005 - ybbA NOLOHH_00960 0.67 -0.2 83,005 - ybbA NOLOHH_00960 0.67 +0.9 83,005 - ybbA NOLOHH_00960 0.67 +0.1 83,005 - ybbA NOLOHH_00960 0.67 +0.0 83,005 - ybbA NOLOHH_00960 0.67 -0.7 83,005 - ybbA NOLOHH_00960 0.67 -0.5 83,005 - ybbA NOLOHH_00960 0.67 -2.4 83,005 - ybbA NOLOHH_00960 0.67 -0.4 83,005 - ybbA NOLOHH_00960 0.67 +0.8 83,005 - ybbA NOLOHH_00960 0.67 +0.5 83,009 - ybbA NOLOHH_00960 0.68 -0.1 83,361 + tesA NOLOHH_00965 0.22 +0.5 83,361 + tesA NOLOHH_00965 0.22 +0.0 83,361 + tesA NOLOHH_00965 0.22 +0.5 83,384 + tesA NOLOHH_00965 0.26 +0.7 83,388 + tesA NOLOHH_00965 0.27 +0.1 83,388 + tesA NOLOHH_00965 0.27 +2.5 83,594 + tesA NOLOHH_00965 0.61 +0.9 83,594 + tesA NOLOHH_00965 0.61 +0.5 83,595 - tesA NOLOHH_00965 0.61 -0.4 83,595 - tesA NOLOHH_00965 0.61 +0.2 83,611 + tesA NOLOHH_00965 0.64 -0.9 83,611 + tesA NOLOHH_00965 0.64 +1.0 83,611 + tesA NOLOHH_00965 0.64 -0.5 83,612 - tesA NOLOHH_00965 0.64 +1.2 83,612 - tesA NOLOHH_00965 0.64 -0.5 83,612 - tesA NOLOHH_00965 0.64 +0.5 83,612 - tesA NOLOHH_00965 0.64 -1.1 83,612 - tesA NOLOHH_00965 0.64 +0.3 83,612 - tesA NOLOHH_00965 0.64 +0.2 83,623 + tesA NOLOHH_00965 0.66 -0.0 83,625 + tesA NOLOHH_00965 0.66 -1.4 83,625 + tesA NOLOHH_00965 0.66 +1.5 83,625 + tesA NOLOHH_00965 0.66 +0.5 83,626 - tesA NOLOHH_00965 0.67 +1.8 83,626 - tesA NOLOHH_00965 0.67 +0.7 83,626 - tesA NOLOHH_00965 0.67 +1.2 83,708 - tesA NOLOHH_00965 0.80 +2.8 83,708 - tesA NOLOHH_00965 0.80 +0.5 83,739 + tesA NOLOHH_00965 0.86 +0.5 83,740 - tesA NOLOHH_00965 0.86 +0.3 83,804 + +0.1 83,805 - -0.5 83,807 + -0.0 83,807 + -0.2 83,808 - +0.9 83,845 + -0.7 83,846 - +1.5 83,869 - -0.3 83,869 - +0.1 83,974 + ybbO NOLOHH_00970 0.16 -0.1 84,088 + ybbO NOLOHH_00970 0.31 +1.5 84,110 + ybbO NOLOHH_00970 0.33 -0.1 84,110 + ybbO NOLOHH_00970 0.33 -1.1 84,110 + ybbO NOLOHH_00970 0.33 +0.7 84,110 + ybbO NOLOHH_00970 0.33 +0.1 84,110 + ybbO NOLOHH_00970 0.33 +0.6 84,111 - ybbO NOLOHH_00970 0.34 -1.0 84,111 - ybbO NOLOHH_00970 0.34 -1.4 84,111 - ybbO NOLOHH_00970 0.34 +0.0 84,233 - ybbO NOLOHH_00970 0.49 -1.1 84,233 - ybbO NOLOHH_00970 0.49 +0.8 84,233 - ybbO NOLOHH_00970 0.49 +1.3 84,299 - ybbO NOLOHH_00970 0.58 +0.5 84,302 + ybbO NOLOHH_00970 0.58 -1.1 84,302 + ybbO NOLOHH_00970 0.58 -1.9 84,358 + ybbO NOLOHH_00970 0.66 +0.9 84,358 + ybbO NOLOHH_00970 0.66 -1.1 84,359 - ybbO NOLOHH_00970 0.66 +0.5 84,391 + ybbO NOLOHH_00970 0.70 -0.5 84,466 + ybbO NOLOHH_00970 0.80 +1.9 84,466 + ybbO NOLOHH_00970 0.80 -1.1 84,467 - ybbO NOLOHH_00970 0.80 -0.1 84,498 + ybbO NOLOHH_00970 0.84 -0.1 84,498 + ybbO NOLOHH_00970 0.84 -0.5 84,498 + ybbO NOLOHH_00970 0.84 -0.6 84,499 - ybbO NOLOHH_00970 0.84 -0.5 84,499 - ybbO NOLOHH_00970 0.84 -0.3 84,499 - ybbO NOLOHH_00970 0.84 +0.2 84,499 - ybbO NOLOHH_00970 0.84 -1.0 84,511 + ybbO NOLOHH_00970 0.85 +1.5 84,512 - ybbO NOLOHH_00970 0.86 +0.2 84,564 + +0.2 84,609 + +0.2 84,610 - -1.0 84,719 - +1.5 84,767 + +2.0
Or see this region's nucleotide sequence