Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05387 and MPMX19_05388 are separated by 73 nucleotides MPMX19_05388 and MPMX19_05389 are separated by 42 nucleotides MPMX19_05389 and MPMX19_05390 are separated by 210 nucleotides
MPMX19_05387: MPMX19_05387 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 64,052 to 64,537
_05387
MPMX19_05388: MPMX19_05388 - Leucine-responsive regulatory protein, at 64,611 to 65,036
_05388
MPMX19_05389: MPMX19_05389 - Pyruvate kinase, at 65,079 to 66,572
_05389
MPMX19_05390: MPMX19_05390 - hypothetical protein, at 66,783 to 69,773
_05390
Position (kb) 65
66
67 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 64.178 kb on + strand, within MPMX19_05387 at 64.179 kb on - strand, within MPMX19_05387 at 64.179 kb on - strand, within MPMX19_05387 at 64.191 kb on - strand, within MPMX19_05387 at 64.250 kb on + strand, within MPMX19_05387 at 64.250 kb on + strand, within MPMX19_05387 at 64.251 kb on - strand, within MPMX19_05387 at 64.251 kb on - strand, within MPMX19_05387 at 64.251 kb on - strand, within MPMX19_05387 at 64.515 kb on - strand at 64.535 kb on + strand at 64.536 kb on - strand at 64.536 kb on - strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.546 kb on + strand at 64.547 kb on - strand at 64.547 kb on - strand at 64.547 kb on - strand at 64.547 kb on - strand at 64.547 kb on - strand at 64.547 kb on - strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.577 kb on + strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.578 kb on - strand at 64.760 kb on + strand, within MPMX19_05388 at 64.760 kb on + strand, within MPMX19_05388 at 64.760 kb on + strand, within MPMX19_05388 at 64.760 kb on + strand, within MPMX19_05388 at 64.760 kb on + strand, within MPMX19_05388 at 64.760 kb on + strand, within MPMX19_05388 at 64.761 kb on - strand, within MPMX19_05388 at 64.761 kb on - strand, within MPMX19_05388 at 64.761 kb on - strand, within MPMX19_05388 at 64.761 kb on - strand, within MPMX19_05388 at 64.761 kb on - strand, within MPMX19_05388 at 64.761 kb on - strand, within MPMX19_05388 at 64.761 kb on - strand, within MPMX19_05388 at 64.905 kb on + strand, within MPMX19_05388 at 64.905 kb on + strand, within MPMX19_05388 at 64.905 kb on + strand, within MPMX19_05388 at 64.906 kb on - strand, within MPMX19_05388 at 64.906 kb on - strand, within MPMX19_05388 at 65.230 kb on + strand, within MPMX19_05389 at 65.231 kb on - strand, within MPMX19_05389 at 65.231 kb on - strand, within MPMX19_05389 at 65.231 kb on - strand, within MPMX19_05389 at 65.231 kb on - strand, within MPMX19_05389 at 65.491 kb on + strand, within MPMX19_05389 at 65.491 kb on + strand, within MPMX19_05389 at 65.492 kb on - strand, within MPMX19_05389 at 65.605 kb on + strand, within MPMX19_05389 at 65.605 kb on + strand, within MPMX19_05389 at 65.605 kb on + strand, within MPMX19_05389 at 65.605 kb on + strand, within MPMX19_05389 at 65.605 kb on + strand, within MPMX19_05389 at 65.605 kb on + strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 65.606 kb on - strand, within MPMX19_05389 at 66.503 kb on + strand at 66.503 kb on + strand at 66.503 kb on + strand at 66.503 kb on + strand at 66.504 kb on - strand at 66.504 kb on - strand at 66.504 kb on - strand at 66.504 kb on - strand at 66.504 kb on - strand at 66.633 kb on - strand at 66.633 kb on - strand at 66.648 kb on + strand at 66.648 kb on + strand at 66.769 kb on + strand at 66.770 kb on - strand at 66.770 kb on - strand at 66.770 kb on - strand at 66.770 kb on - strand at 66.785 kb on - strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.796 kb on - strand at 66.796 kb on - strand at 66.796 kb on - strand at 66.796 kb on - strand at 66.798 kb on - strand at 66.798 kb on - strand at 66.834 kb on + strand at 66.910 kb on + strand at 66.984 kb on + strand at 67.046 kb on + strand at 67.046 kb on + strand at 67.047 kb on - strand at 67.047 kb on - strand at 67.048 kb on + strand at 67.048 kb on + strand at 67.048 kb on + strand at 67.048 kb on + strand at 67.049 kb on - strand at 67.080 kb on + strand at 67.081 kb on - strand at 67.113 kb on + strand, within MPMX19_05390 at 67.113 kb on + strand, within MPMX19_05390 at 67.113 kb on + strand, within MPMX19_05390 at 67.113 kb on + strand, within MPMX19_05390 at 67.113 kb on + strand, within MPMX19_05390 at 67.114 kb on - strand, within MPMX19_05390 at 67.114 kb on - strand, within MPMX19_05390 at 67.171 kb on - strand, within MPMX19_05390 at 67.216 kb on + strand, within MPMX19_05390 at 67.217 kb on - strand, within MPMX19_05390 at 67.228 kb on - strand, within MPMX19_05390 at 67.228 kb on - strand, within MPMX19_05390 at 67.228 kb on - strand, within MPMX19_05390 at 67.259 kb on + strand, within MPMX19_05390 at 67.259 kb on + strand, within MPMX19_05390 at 67.259 kb on + strand, within MPMX19_05390 at 67.260 kb on - strand, within MPMX19_05390 at 67.260 kb on - strand, within MPMX19_05390 at 67.260 kb on - strand, within MPMX19_05390 at 67.260 kb on - strand, within MPMX19_05390 at 67.260 kb on - strand, within MPMX19_05390 at 67.285 kb on + strand, within MPMX19_05390 at 67.285 kb on + strand, within MPMX19_05390 at 67.286 kb on - strand, within MPMX19_05390 at 67.286 kb on - strand, within MPMX19_05390 at 67.286 kb on - strand, within MPMX19_05390 at 67.286 kb on - strand, within MPMX19_05390 at 67.286 kb on - strand, within MPMX19_05390 at 67.334 kb on + strand, within MPMX19_05390 at 67.335 kb on - strand, within MPMX19_05390 at 67.423 kb on + strand, within MPMX19_05390 at 67.424 kb on - strand, within MPMX19_05390 at 67.424 kb on - strand, within MPMX19_05390 at 67.424 kb on - strand, within MPMX19_05390 at 67.445 kb on + strand, within MPMX19_05390 at 67.446 kb on - strand, within MPMX19_05390 at 67.446 kb on - strand, within MPMX19_05390 at 67.458 kb on + strand, within MPMX19_05390 at 67.459 kb on - strand, within MPMX19_05390 at 67.459 kb on - strand, within MPMX19_05390 at 67.512 kb on - strand, within MPMX19_05390 at 67.512 kb on - strand, within MPMX19_05390 at 67.516 kb on + strand, within MPMX19_05390 at 67.517 kb on - strand, within MPMX19_05390 at 67.517 kb on - strand, within MPMX19_05390 at 67.523 kb on + strand, within MPMX19_05390 at 67.523 kb on + strand, within MPMX19_05390 at 67.524 kb on - strand, within MPMX19_05390 at 67.524 kb on - strand, within MPMX19_05390
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 64,178 + MPMX19_05387 0.26 +0.8 64,179 - MPMX19_05387 0.26 -1.8 64,179 - MPMX19_05387 0.26 -0.2 64,191 - MPMX19_05387 0.29 -0.8 64,250 + MPMX19_05387 0.41 -0.8 64,250 + MPMX19_05387 0.41 -0.8 64,251 - MPMX19_05387 0.41 +0.1 64,251 - MPMX19_05387 0.41 +0.2 64,251 - MPMX19_05387 0.41 -0.5 64,515 - +1.4 64,535 + +2.8 64,536 - +0.6 64,536 - -1.4 64,546 + -2.6 64,546 + +0.2 64,546 + -0.9 64,546 + -1.2 64,546 + -2.4 64,546 + -0.2 64,546 + +0.1 64,546 + -0.3 64,546 + +0.3 64,546 + +0.8 64,546 + -1.4 64,546 + -1.8 64,546 + +1.8 64,547 - -0.2 64,547 - +0.2 64,547 - +0.1 64,547 - +1.1 64,547 - -0.4 64,547 - +0.5 64,577 + +0.1 64,577 + -0.8 64,577 + -0.6 64,577 + -0.2 64,577 + +0.0 64,577 + -0.9 64,577 + +0.1 64,577 + +0.6 64,577 + +0.8 64,577 + -0.5 64,577 + -0.4 64,577 + -0.4 64,577 + -0.8 64,577 + -2.5 64,577 + +0.3 64,577 + -1.5 64,578 - -0.5 64,578 - -0.5 64,578 - +0.8 64,578 - +0.1 64,578 - +0.2 64,578 - +0.8 64,578 - +0.5 64,578 - +1.3 64,578 - -0.5 64,578 - +0.8 64,578 - +1.1 64,578 - +1.0 64,578 - -0.6 64,578 - -1.1 64,578 - -1.2 64,760 + MPMX19_05388 0.35 -0.8 64,760 + MPMX19_05388 0.35 -1.8 64,760 + MPMX19_05388 0.35 -1.9 64,760 + MPMX19_05388 0.35 -0.9 64,760 + MPMX19_05388 0.35 -1.2 64,760 + MPMX19_05388 0.35 +0.5 64,761 - MPMX19_05388 0.35 +1.4 64,761 - MPMX19_05388 0.35 +0.7 64,761 - MPMX19_05388 0.35 -2.2 64,761 - MPMX19_05388 0.35 +0.0 64,761 - MPMX19_05388 0.35 +0.2 64,761 - MPMX19_05388 0.35 +0.2 64,761 - MPMX19_05388 0.35 -1.0 64,905 + MPMX19_05388 0.69 -1.4 64,905 + MPMX19_05388 0.69 -0.8 64,905 + MPMX19_05388 0.69 -0.5 64,906 - MPMX19_05388 0.69 -0.2 64,906 - MPMX19_05388 0.69 +0.6 65,230 + MPMX19_05389 0.10 +0.2 65,231 - MPMX19_05389 0.10 -1.4 65,231 - MPMX19_05389 0.10 -0.8 65,231 - MPMX19_05389 0.10 -0.9 65,231 - MPMX19_05389 0.10 +1.4 65,491 + MPMX19_05389 0.28 -0.2 65,491 + MPMX19_05389 0.28 -1.5 65,492 - MPMX19_05389 0.28 -1.7 65,605 + MPMX19_05389 0.35 -2.0 65,605 + MPMX19_05389 0.35 +0.3 65,605 + MPMX19_05389 0.35 -0.2 65,605 + MPMX19_05389 0.35 -0.2 65,605 + MPMX19_05389 0.35 -1.8 65,605 + MPMX19_05389 0.35 +0.4 65,606 - MPMX19_05389 0.35 -1.4 65,606 - MPMX19_05389 0.35 +0.2 65,606 - MPMX19_05389 0.35 -0.2 65,606 - MPMX19_05389 0.35 +1.6 65,606 - MPMX19_05389 0.35 +0.2 65,606 - MPMX19_05389 0.35 -0.8 65,606 - MPMX19_05389 0.35 +0.8 65,606 - MPMX19_05389 0.35 -1.2 66,503 + -0.8 66,503 + +0.8 66,503 + -1.0 66,503 + +0.8 66,504 - +0.4 66,504 - -0.5 66,504 - -1.5 66,504 - +0.8 66,504 - -1.2 66,633 - +0.4 66,633 - -1.8 66,648 + +0.2 66,648 + +1.4 66,769 + -0.4 66,770 - -0.4 66,770 - -0.8 66,770 - +0.8 66,770 - +0.0 66,785 - -0.2 66,795 + +0.6 66,795 + +0.1 66,796 - +0.4 66,796 - +0.1 66,796 - -1.4 66,796 - -0.8 66,798 - +0.8 66,798 - +0.5 66,834 + -0.2 66,910 + -1.0 66,984 + -1.6 67,046 + -0.5 67,046 + -0.3 67,047 - +0.1 67,047 - -0.2 67,048 + -0.7 67,048 + +0.6 67,048 + -0.2 67,048 + -0.2 67,049 - -0.2 67,080 + -1.9 67,081 - +0.1 67,113 + MPMX19_05390 0.11 -1.2 67,113 + MPMX19_05390 0.11 +0.0 67,113 + MPMX19_05390 0.11 -1.8 67,113 + MPMX19_05390 0.11 -1.2 67,113 + MPMX19_05390 0.11 -0.4 67,114 - MPMX19_05390 0.11 +0.0 67,114 - MPMX19_05390 0.11 +0.8 67,171 - MPMX19_05390 0.13 +0.1 67,216 + MPMX19_05390 0.14 -0.1 67,217 - MPMX19_05390 0.15 -1.3 67,228 - MPMX19_05390 0.15 -0.2 67,228 - MPMX19_05390 0.15 -0.7 67,228 - MPMX19_05390 0.15 +0.1 67,259 + MPMX19_05390 0.16 +0.6 67,259 + MPMX19_05390 0.16 +1.5 67,259 + MPMX19_05390 0.16 -1.2 67,260 - MPMX19_05390 0.16 +0.1 67,260 - MPMX19_05390 0.16 -0.2 67,260 - MPMX19_05390 0.16 +0.4 67,260 - MPMX19_05390 0.16 -1.5 67,260 - MPMX19_05390 0.16 -0.2 67,285 + MPMX19_05390 0.17 -0.2 67,285 + MPMX19_05390 0.17 -1.8 67,286 - MPMX19_05390 0.17 +0.1 67,286 - MPMX19_05390 0.17 -0.4 67,286 - MPMX19_05390 0.17 -0.8 67,286 - MPMX19_05390 0.17 +0.4 67,286 - MPMX19_05390 0.17 +0.0 67,334 + MPMX19_05390 0.18 -1.0 67,335 - MPMX19_05390 0.18 -0.5 67,423 + MPMX19_05390 0.21 -0.8 67,424 - MPMX19_05390 0.21 -0.8 67,424 - MPMX19_05390 0.21 -0.8 67,424 - MPMX19_05390 0.21 -0.6 67,445 + MPMX19_05390 0.22 -0.2 67,446 - MPMX19_05390 0.22 -1.2 67,446 - MPMX19_05390 0.22 -0.2 67,458 + MPMX19_05390 0.23 +0.1 67,459 - MPMX19_05390 0.23 -0.2 67,459 - MPMX19_05390 0.23 -0.3 67,512 - MPMX19_05390 0.24 +0.5 67,512 - MPMX19_05390 0.24 +1.8 67,516 + MPMX19_05390 0.25 +1.0 67,517 - MPMX19_05390 0.25 -1.6 67,517 - MPMX19_05390 0.25 +0.2 67,523 + MPMX19_05390 0.25 -0.8 67,523 + MPMX19_05390 0.25 -0.8 67,524 - MPMX19_05390 0.25 -1.6 67,524 - MPMX19_05390 0.25 +0.8
Or see this region's nucleotide sequence