Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05380 and MPMX19_05381 are separated by 143 nucleotides MPMX19_05381 and MPMX19_05382 are separated by 127 nucleotides
MPMX19_05380: MPMX19_05380 - hypothetical protein, at 54,951 to 55,703
_05380
MPMX19_05381: MPMX19_05381 - Glycine cleavage system transcriptional activator, at 55,847 to 56,734
_05381
MPMX19_05382: MPMX19_05382 - sugar efflux transporter, at 56,862 to 58,073
_05382
Position (kb) 55
56
57 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 54.899 kb on + strand at 54.925 kb on - strand at 54.937 kb on + strand at 54.937 kb on + strand at 54.937 kb on + strand at 54.938 kb on - strand at 54.988 kb on + strand at 54.989 kb on - strand at 54.989 kb on - strand at 55.016 kb on - strand at 55.165 kb on + strand, within MPMX19_05380 at 55.165 kb on + strand, within MPMX19_05380 at 55.165 kb on + strand, within MPMX19_05380 at 55.165 kb on + strand, within MPMX19_05380 at 55.165 kb on + strand, within MPMX19_05380 at 55.165 kb on + strand, within MPMX19_05380 at 55.165 kb on + strand, within MPMX19_05380 at 55.166 kb on - strand, within MPMX19_05380 at 55.166 kb on - strand, within MPMX19_05380 at 55.166 kb on - strand, within MPMX19_05380 at 55.166 kb on - strand, within MPMX19_05380 at 55.166 kb on - strand, within MPMX19_05380 at 55.166 kb on - strand, within MPMX19_05380 at 55.166 kb on - strand, within MPMX19_05380 at 56.303 kb on + strand, within MPMX19_05381 at 56.304 kb on - strand, within MPMX19_05381 at 56.304 kb on - strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.470 kb on + strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.471 kb on - strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.510 kb on + strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.511 kb on - strand, within MPMX19_05381 at 56.570 kb on + strand, within MPMX19_05381 at 56.570 kb on + strand, within MPMX19_05381 at 56.570 kb on + strand, within MPMX19_05381 at 56.570 kb on + strand, within MPMX19_05381 at 56.570 kb on + strand, within MPMX19_05381 at 56.570 kb on + strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.571 kb on - strand, within MPMX19_05381 at 56.645 kb on + strand, within MPMX19_05381 at 56.645 kb on + strand, within MPMX19_05381 at 56.645 kb on + strand, within MPMX19_05381 at 56.645 kb on + strand, within MPMX19_05381 at 56.645 kb on + strand, within MPMX19_05381 at 56.646 kb on - strand at 56.646 kb on - strand at 56.646 kb on - strand at 56.646 kb on - strand at 56.646 kb on - strand at 56.646 kb on - strand at 56.646 kb on - strand at 56.654 kb on + strand at 56.654 kb on + strand at 56.655 kb on - strand at 56.708 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.804 kb on + strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.805 kb on - strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.973 kb on + strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.974 kb on - strand at 56.976 kb on + strand at 56.976 kb on + strand at 56.976 kb on + strand at 56.976 kb on + strand at 56.976 kb on + strand at 56.976 kb on + strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 56.977 kb on - strand at 57.067 kb on - strand, within MPMX19_05382 at 57.477 kb on + strand, within MPMX19_05382 at 57.477 kb on + strand, within MPMX19_05382 at 57.478 kb on - strand, within MPMX19_05382 at 57.478 kb on - strand, within MPMX19_05382 at 57.478 kb on - strand, within MPMX19_05382 at 57.478 kb on - strand, within MPMX19_05382 at 57.546 kb on + strand, within MPMX19_05382 at 57.546 kb on + strand, within MPMX19_05382 at 57.547 kb on - strand, within MPMX19_05382 at 57.579 kb on + strand, within MPMX19_05382 at 57.579 kb on + strand, within MPMX19_05382 at 57.579 kb on + strand, within MPMX19_05382 at 57.579 kb on + strand, within MPMX19_05382 at 57.580 kb on - strand, within MPMX19_05382 at 57.580 kb on - strand, within MPMX19_05382 at 57.580 kb on - strand, within MPMX19_05382
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 54,899 + -0.1 54,925 - +0.8 54,937 + -1.5 54,937 + -0.8 54,937 + -1.9 54,938 - -0.7 54,988 + +0.8 54,989 - +1.4 54,989 - +0.0 55,016 - -2.5 55,165 + MPMX19_05380 0.28 -0.5 55,165 + MPMX19_05380 0.28 +3.1 55,165 + MPMX19_05380 0.28 -0.2 55,165 + MPMX19_05380 0.28 -0.8 55,165 + MPMX19_05380 0.28 +0.6 55,165 + MPMX19_05380 0.28 -0.4 55,165 + MPMX19_05380 0.28 +0.2 55,166 - MPMX19_05380 0.29 +0.8 55,166 - MPMX19_05380 0.29 +1.6 55,166 - MPMX19_05380 0.29 +0.0 55,166 - MPMX19_05380 0.29 -0.4 55,166 - MPMX19_05380 0.29 +0.6 55,166 - MPMX19_05380 0.29 +1.1 55,166 - MPMX19_05380 0.29 +0.4 56,303 + MPMX19_05381 0.51 -0.8 56,304 - MPMX19_05381 0.51 -1.8 56,304 - MPMX19_05381 0.51 +0.6 56,470 + MPMX19_05381 0.70 -0.5 56,470 + MPMX19_05381 0.70 +0.6 56,470 + MPMX19_05381 0.70 -0.1 56,470 + MPMX19_05381 0.70 +1.4 56,470 + MPMX19_05381 0.70 -0.2 56,470 + MPMX19_05381 0.70 +0.4 56,470 + MPMX19_05381 0.70 +1.8 56,470 + MPMX19_05381 0.70 +0.6 56,470 + MPMX19_05381 0.70 -0.2 56,470 + MPMX19_05381 0.70 -0.5 56,470 + MPMX19_05381 0.70 -0.1 56,470 + MPMX19_05381 0.70 -1.5 56,471 - MPMX19_05381 0.70 +0.8 56,471 - MPMX19_05381 0.70 +1.8 56,471 - MPMX19_05381 0.70 -0.2 56,471 - MPMX19_05381 0.70 +0.1 56,471 - MPMX19_05381 0.70 +0.3 56,471 - MPMX19_05381 0.70 +0.2 56,471 - MPMX19_05381 0.70 +0.3 56,471 - MPMX19_05381 0.70 +0.0 56,471 - MPMX19_05381 0.70 +0.6 56,471 - MPMX19_05381 0.70 -0.2 56,471 - MPMX19_05381 0.70 -1.6 56,471 - MPMX19_05381 0.70 +0.1 56,471 - MPMX19_05381 0.70 -0.8 56,471 - MPMX19_05381 0.70 +0.0 56,471 - MPMX19_05381 0.70 +1.8 56,471 - MPMX19_05381 0.70 +0.3 56,471 - MPMX19_05381 0.70 -0.5 56,471 - MPMX19_05381 0.70 +0.5 56,510 + MPMX19_05381 0.75 -2.2 56,510 + MPMX19_05381 0.75 +0.4 56,510 + MPMX19_05381 0.75 +1.0 56,510 + MPMX19_05381 0.75 +0.1 56,510 + MPMX19_05381 0.75 +1.3 56,510 + MPMX19_05381 0.75 +1.8 56,510 + MPMX19_05381 0.75 +0.4 56,510 + MPMX19_05381 0.75 -1.7 56,510 + MPMX19_05381 0.75 +0.2 56,510 + MPMX19_05381 0.75 +0.4 56,510 + MPMX19_05381 0.75 -0.2 56,510 + MPMX19_05381 0.75 -1.3 56,510 + MPMX19_05381 0.75 +0.1 56,510 + MPMX19_05381 0.75 -0.4 56,510 + MPMX19_05381 0.75 +1.3 56,510 + MPMX19_05381 0.75 -0.2 56,510 + MPMX19_05381 0.75 +0.5 56,510 + MPMX19_05381 0.75 +0.6 56,510 + MPMX19_05381 0.75 +0.1 56,510 + MPMX19_05381 0.75 -0.7 56,510 + MPMX19_05381 0.75 -0.2 56,510 + MPMX19_05381 0.75 -0.8 56,510 + MPMX19_05381 0.75 -0.8 56,510 + MPMX19_05381 0.75 -0.4 56,511 - MPMX19_05381 0.75 -0.5 56,511 - MPMX19_05381 0.75 -0.1 56,511 - MPMX19_05381 0.75 +0.1 56,511 - MPMX19_05381 0.75 -1.5 56,511 - MPMX19_05381 0.75 -0.7 56,511 - MPMX19_05381 0.75 +0.8 56,511 - MPMX19_05381 0.75 +0.1 56,511 - MPMX19_05381 0.75 -0.2 56,511 - MPMX19_05381 0.75 +0.6 56,511 - MPMX19_05381 0.75 -0.4 56,511 - MPMX19_05381 0.75 -0.2 56,570 + MPMX19_05381 0.81 -0.7 56,570 + MPMX19_05381 0.81 +0.4 56,570 + MPMX19_05381 0.81 +0.2 56,570 + MPMX19_05381 0.81 -0.2 56,570 + MPMX19_05381 0.81 -0.4 56,570 + MPMX19_05381 0.81 +0.4 56,571 - MPMX19_05381 0.82 +0.2 56,571 - MPMX19_05381 0.82 +2.4 56,571 - MPMX19_05381 0.82 -0.6 56,571 - MPMX19_05381 0.82 +1.2 56,571 - MPMX19_05381 0.82 -1.8 56,571 - MPMX19_05381 0.82 -0.2 56,571 - MPMX19_05381 0.82 +0.6 56,571 - MPMX19_05381 0.82 -0.5 56,571 - MPMX19_05381 0.82 +0.3 56,571 - MPMX19_05381 0.82 +0.6 56,571 - MPMX19_05381 0.82 -1.2 56,645 + MPMX19_05381 0.90 +0.8 56,645 + MPMX19_05381 0.90 -1.4 56,645 + MPMX19_05381 0.90 -1.5 56,645 + MPMX19_05381 0.90 +2.6 56,645 + MPMX19_05381 0.90 -2.8 56,646 - +1.2 56,646 - -0.8 56,646 - +0.6 56,646 - -0.5 56,646 - -0.2 56,646 - -1.4 56,646 - -1.0 56,654 + +1.8 56,654 + -1.8 56,655 - +0.1 56,708 + -0.4 56,804 + -1.0 56,804 + -0.5 56,804 + +0.2 56,804 + -0.6 56,804 + -0.2 56,804 + +2.4 56,804 + -0.1 56,804 + +0.1 56,804 + -2.2 56,804 + -0.8 56,804 + -1.5 56,804 + +1.4 56,804 + -1.6 56,804 + +0.2 56,804 + -0.2 56,804 + -2.0 56,804 + +0.0 56,804 + -0.5 56,804 + -0.8 56,804 + -1.0 56,804 + -0.6 56,804 + -0.8 56,804 + +0.1 56,804 + +0.8 56,804 + -0.8 56,804 + -0.5 56,804 + -1.2 56,805 - +1.4 56,805 - -0.2 56,805 - -1.5 56,805 - -0.5 56,805 - -0.5 56,805 - -0.3 56,805 - +0.2 56,805 - -0.1 56,805 - -0.2 56,805 - +1.1 56,805 - -0.2 56,805 - +1.1 56,805 - +0.7 56,805 - -0.8 56,805 - +0.6 56,805 - +1.3 56,805 - +1.3 56,805 - -1.2 56,805 - +0.1 56,805 - -0.9 56,805 - -1.6 56,805 - -0.4 56,805 - -1.4 56,805 - +0.8 56,805 - -1.8 56,805 - -0.9 56,973 + -0.8 56,973 + +0.4 56,973 + +0.2 56,973 + -0.1 56,973 + +0.2 56,973 + -0.2 56,973 + -0.2 56,973 + +0.4 56,973 + +0.3 56,973 + -0.2 56,973 + +1.0 56,973 + -1.8 56,973 + +0.5 56,973 + -1.9 56,973 + +0.4 56,973 + +0.3 56,973 + +0.8 56,973 + -0.6 56,973 + -1.2 56,973 + -0.2 56,973 + +0.4 56,973 + +1.4 56,973 + +2.2 56,973 + +1.2 56,973 + -0.5 56,973 + -0.2 56,973 + -2.0 56,973 + +1.0 56,973 + -0.2 56,973 + +0.8 56,973 + +0.1 56,973 + +0.2 56,973 + +0.5 56,973 + +0.5 56,973 + -0.3 56,973 + -0.3 56,973 + -1.2 56,973 + -0.8 56,973 + +1.6 56,973 + -0.8 56,973 + +1.1 56,974 - +0.8 56,974 - +0.8 56,974 - +0.2 56,974 - -0.6 56,974 - +1.0 56,974 - -1.2 56,974 - -0.2 56,974 - +0.6 56,974 - -1.4 56,974 - -0.8 56,974 - +1.1 56,974 - +1.2 56,974 - -0.2 56,974 - +0.6 56,974 - -0.5 56,974 - +1.2 56,974 - +1.1 56,974 - -1.0 56,974 - -0.1 56,974 - -0.2 56,974 - +0.2 56,974 - -0.4 56,974 - -1.1 56,974 - -0.8 56,974 - +1.3 56,974 - -0.6 56,974 - -0.3 56,974 - +0.0 56,974 - -0.1 56,974 - +0.5 56,974 - -0.8 56,974 - +0.8 56,974 - -2.0 56,974 - -0.6 56,974 - +0.4 56,974 - -0.4 56,974 - -2.0 56,974 - -1.1 56,974 - +0.0 56,974 - +0.4 56,974 - +0.1 56,976 + -0.7 56,976 + +0.1 56,976 + +0.6 56,976 + -0.0 56,976 + -0.2 56,976 + +0.8 56,977 - +0.5 56,977 - -1.8 56,977 - -0.2 56,977 - -0.4 56,977 - -0.6 56,977 - -0.5 56,977 - -1.5 56,977 - -0.2 56,977 - +0.7 56,977 - -0.2 56,977 - -2.8 57,067 - MPMX19_05382 0.17 +0.5 57,477 + MPMX19_05382 0.51 -0.7 57,477 + MPMX19_05382 0.51 +0.8 57,478 - MPMX19_05382 0.51 -1.2 57,478 - MPMX19_05382 0.51 -0.4 57,478 - MPMX19_05382 0.51 -0.5 57,478 - MPMX19_05382 0.51 +1.5 57,546 + MPMX19_05382 0.56 +1.8 57,546 + MPMX19_05382 0.56 +0.3 57,547 - MPMX19_05382 0.57 -0.8 57,579 + MPMX19_05382 0.59 -0.4 57,579 + MPMX19_05382 0.59 -0.6 57,579 + MPMX19_05382 0.59 -1.0 57,579 + MPMX19_05382 0.59 +1.8 57,580 - MPMX19_05382 0.59 -0.6 57,580 - MPMX19_05382 0.59 -0.6 57,580 - MPMX19_05382 0.59 -1.2
Or see this region's nucleotide sequence