Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03878 and MPMX19_03879 are separated by 2 nucleotides MPMX19_03879 and MPMX19_03880 are separated by 41 nucleotides
MPMX19_03878: MPMX19_03878 - hypothetical protein, at 128,771 to 131,509
_03878
MPMX19_03879: MPMX19_03879 - hypothetical protein, at 131,512 to 133,281
_03879
MPMX19_03880: MPMX19_03880 - hypothetical protein, at 133,323 to 136,073
_03880
Position (kb) 131
132
133
134 Strain fitness (log2 ratio) -2
-1
0
1
2 at 130.615 kb on + strand, within MPMX19_03878 at 130.616 kb on - strand, within MPMX19_03878 at 130.616 kb on - strand, within MPMX19_03878 at 130.673 kb on + strand, within MPMX19_03878 at 130.775 kb on + strand, within MPMX19_03878 at 130.775 kb on + strand, within MPMX19_03878 at 130.775 kb on + strand, within MPMX19_03878 at 130.775 kb on + strand, within MPMX19_03878 at 130.776 kb on - strand, within MPMX19_03878 at 130.776 kb on - strand, within MPMX19_03878 at 130.776 kb on - strand, within MPMX19_03878 at 130.793 kb on + strand, within MPMX19_03878 at 130.793 kb on + strand, within MPMX19_03878 at 130.813 kb on + strand, within MPMX19_03878 at 130.813 kb on + strand, within MPMX19_03878 at 130.813 kb on + strand, within MPMX19_03878 at 130.850 kb on + strand, within MPMX19_03878 at 130.850 kb on + strand, within MPMX19_03878 at 130.851 kb on - strand, within MPMX19_03878 at 130.991 kb on + strand, within MPMX19_03878 at 130.992 kb on - strand, within MPMX19_03878 at 130.992 kb on - strand, within MPMX19_03878 at 131.124 kb on + strand, within MPMX19_03878 at 131.189 kb on + strand, within MPMX19_03878 at 131.189 kb on + strand, within MPMX19_03878 at 131.189 kb on + strand, within MPMX19_03878 at 131.190 kb on - strand, within MPMX19_03878 at 131.190 kb on - strand, within MPMX19_03878 at 131.190 kb on - strand, within MPMX19_03878 at 131.240 kb on + strand at 131.240 kb on + strand at 131.240 kb on + strand at 131.241 kb on - strand at 131.241 kb on - strand at 131.241 kb on - strand at 131.241 kb on - strand at 131.286 kb on - strand at 131.477 kb on + strand at 131.477 kb on + strand at 131.477 kb on + strand at 131.477 kb on + strand at 131.477 kb on + strand at 131.477 kb on + strand at 131.478 kb on - strand at 131.478 kb on - strand at 131.478 kb on - strand at 131.478 kb on - strand at 131.596 kb on + strand at 132.046 kb on + strand, within MPMX19_03879 at 132.046 kb on + strand, within MPMX19_03879 at 132.047 kb on - strand, within MPMX19_03879 at 132.047 kb on - strand, within MPMX19_03879 at 132.047 kb on - strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.169 kb on + strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.170 kb on - strand, within MPMX19_03879 at 132.187 kb on + strand, within MPMX19_03879 at 132.187 kb on + strand, within MPMX19_03879 at 132.412 kb on + strand, within MPMX19_03879 at 132.412 kb on + strand, within MPMX19_03879 at 132.412 kb on + strand, within MPMX19_03879 at 132.412 kb on + strand, within MPMX19_03879 at 132.412 kb on + strand, within MPMX19_03879 at 132.412 kb on + strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.413 kb on - strand, within MPMX19_03879 at 132.537 kb on + strand, within MPMX19_03879 at 132.538 kb on - strand, within MPMX19_03879 at 132.538 kb on - strand, within MPMX19_03879 at 132.591 kb on - strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.717 kb on + strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.718 kb on - strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.736 kb on + strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.737 kb on - strand, within MPMX19_03879 at 132.760 kb on + strand, within MPMX19_03879 at 132.760 kb on + strand, within MPMX19_03879 at 132.760 kb on + strand, within MPMX19_03879 at 132.760 kb on + strand, within MPMX19_03879 at 132.761 kb on - strand, within MPMX19_03879 at 132.761 kb on - strand, within MPMX19_03879 at 132.761 kb on - strand, within MPMX19_03879 at 132.761 kb on - strand, within MPMX19_03879 at 132.761 kb on - strand, within MPMX19_03879 at 132.761 kb on - strand, within MPMX19_03879 at 133.522 kb on + strand at 133.523 kb on - strand at 133.669 kb on + strand, within MPMX19_03880 at 133.670 kb on - strand, within MPMX19_03880 at 133.670 kb on - strand, within MPMX19_03880 at 133.670 kb on - strand, within MPMX19_03880 at 134.002 kb on + strand, within MPMX19_03880 at 134.002 kb on + strand, within MPMX19_03880 at 134.002 kb on + strand, within MPMX19_03880 at 134.002 kb on + strand, within MPMX19_03880 at 134.002 kb on + strand, within MPMX19_03880 at 134.002 kb on + strand, within MPMX19_03880 at 134.003 kb on - strand, within MPMX19_03880 at 134.003 kb on - strand, within MPMX19_03880 at 134.003 kb on - strand, within MPMX19_03880 at 134.003 kb on - strand, within MPMX19_03880 at 134.003 kb on - strand, within MPMX19_03880 at 134.003 kb on - strand, within MPMX19_03880 at 134.003 kb on - strand, within MPMX19_03880 at 134.035 kb on + strand, within MPMX19_03880 at 134.035 kb on + strand, within MPMX19_03880 at 134.035 kb on + strand, within MPMX19_03880 at 134.035 kb on + strand, within MPMX19_03880 at 134.036 kb on - strand, within MPMX19_03880 at 134.083 kb on + strand, within MPMX19_03880 at 134.083 kb on + strand, within MPMX19_03880 at 134.083 kb on + strand, within MPMX19_03880 at 134.083 kb on + strand, within MPMX19_03880 at 134.084 kb on - strand, within MPMX19_03880 at 134.084 kb on - strand, within MPMX19_03880 at 134.084 kb on - strand, within MPMX19_03880 at 134.084 kb on - strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.125 kb on + strand, within MPMX19_03880 at 134.126 kb on - strand, within MPMX19_03880 at 134.126 kb on - strand, within MPMX19_03880 at 134.126 kb on - strand, within MPMX19_03880 at 134.126 kb on - strand, within MPMX19_03880 at 134.126 kb on - strand, within MPMX19_03880 at 134.185 kb on + strand, within MPMX19_03880 at 134.185 kb on + strand, within MPMX19_03880 at 134.185 kb on + strand, within MPMX19_03880 at 134.185 kb on + strand, within MPMX19_03880 at 134.185 kb on + strand, within MPMX19_03880 at 134.185 kb on + strand, within MPMX19_03880 at 134.186 kb on - strand, within MPMX19_03880 at 134.186 kb on - strand, within MPMX19_03880 at 134.186 kb on - strand, within MPMX19_03880
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 130,615 + MPMX19_03878 0.67 +1.2 130,616 - MPMX19_03878 0.67 -0.2 130,616 - MPMX19_03878 0.67 +1.1 130,673 + MPMX19_03878 0.69 +0.8 130,775 + MPMX19_03878 0.73 +0.3 130,775 + MPMX19_03878 0.73 +0.2 130,775 + MPMX19_03878 0.73 -1.0 130,775 + MPMX19_03878 0.73 -1.7 130,776 - MPMX19_03878 0.73 +0.4 130,776 - MPMX19_03878 0.73 -1.3 130,776 - MPMX19_03878 0.73 +0.8 130,793 + MPMX19_03878 0.74 +1.4 130,793 + MPMX19_03878 0.74 +1.6 130,813 + MPMX19_03878 0.75 +0.1 130,813 + MPMX19_03878 0.75 +0.4 130,813 + MPMX19_03878 0.75 -1.7 130,850 + MPMX19_03878 0.76 -1.2 130,850 + MPMX19_03878 0.76 +1.0 130,851 - MPMX19_03878 0.76 +0.3 130,991 + MPMX19_03878 0.81 -1.3 130,992 - MPMX19_03878 0.81 -1.0 130,992 - MPMX19_03878 0.81 +0.8 131,124 + MPMX19_03878 0.86 +0.3 131,189 + MPMX19_03878 0.88 +1.6 131,189 + MPMX19_03878 0.88 -1.1 131,189 + MPMX19_03878 0.88 +0.8 131,190 - MPMX19_03878 0.88 +0.2 131,190 - MPMX19_03878 0.88 +0.8 131,190 - MPMX19_03878 0.88 -0.3 131,240 + -0.5 131,240 + -1.4 131,240 + +0.3 131,241 - -1.7 131,241 - +1.6 131,241 - +0.3 131,241 - +0.5 131,286 - -0.9 131,477 + -1.5 131,477 + -2.0 131,477 + -0.2 131,477 + -0.6 131,477 + +0.4 131,477 + +0.8 131,478 - +0.8 131,478 - -1.2 131,478 - +0.6 131,478 - +0.3 131,596 + +0.4 132,046 + MPMX19_03879 0.30 -0.2 132,046 + MPMX19_03879 0.30 -0.3 132,047 - MPMX19_03879 0.30 -0.7 132,047 - MPMX19_03879 0.30 -0.3 132,047 - MPMX19_03879 0.30 +0.6 132,169 + MPMX19_03879 0.37 +0.5 132,169 + MPMX19_03879 0.37 -0.1 132,169 + MPMX19_03879 0.37 +0.0 132,169 + MPMX19_03879 0.37 +1.1 132,169 + MPMX19_03879 0.37 -1.2 132,169 + MPMX19_03879 0.37 -1.6 132,169 + MPMX19_03879 0.37 -0.2 132,169 + MPMX19_03879 0.37 +0.3 132,169 + MPMX19_03879 0.37 +0.1 132,169 + MPMX19_03879 0.37 -0.8 132,169 + MPMX19_03879 0.37 -2.3 132,169 + MPMX19_03879 0.37 +0.1 132,169 + MPMX19_03879 0.37 +0.8 132,170 - MPMX19_03879 0.37 -0.4 132,170 - MPMX19_03879 0.37 +1.3 132,170 - MPMX19_03879 0.37 +1.8 132,170 - MPMX19_03879 0.37 +0.1 132,170 - MPMX19_03879 0.37 +0.8 132,170 - MPMX19_03879 0.37 -0.0 132,170 - MPMX19_03879 0.37 -1.5 132,170 - MPMX19_03879 0.37 -0.5 132,170 - MPMX19_03879 0.37 -1.2 132,170 - MPMX19_03879 0.37 -1.2 132,170 - MPMX19_03879 0.37 -1.6 132,170 - MPMX19_03879 0.37 +0.8 132,187 + MPMX19_03879 0.38 -0.5 132,187 + MPMX19_03879 0.38 +2.4 132,412 + MPMX19_03879 0.51 -0.0 132,412 + MPMX19_03879 0.51 -0.2 132,412 + MPMX19_03879 0.51 -0.2 132,412 + MPMX19_03879 0.51 -0.2 132,412 + MPMX19_03879 0.51 +1.3 132,412 + MPMX19_03879 0.51 -1.2 132,413 - MPMX19_03879 0.51 -0.2 132,413 - MPMX19_03879 0.51 +1.2 132,413 - MPMX19_03879 0.51 +0.8 132,413 - MPMX19_03879 0.51 -0.5 132,413 - MPMX19_03879 0.51 -0.3 132,413 - MPMX19_03879 0.51 -2.0 132,413 - MPMX19_03879 0.51 +1.3 132,413 - MPMX19_03879 0.51 -0.1 132,413 - MPMX19_03879 0.51 +1.8 132,537 + MPMX19_03879 0.58 +1.8 132,538 - MPMX19_03879 0.58 -0.2 132,538 - MPMX19_03879 0.58 -1.3 132,591 - MPMX19_03879 0.61 +1.3 132,717 + MPMX19_03879 0.68 +0.4 132,717 + MPMX19_03879 0.68 -0.7 132,717 + MPMX19_03879 0.68 +0.8 132,717 + MPMX19_03879 0.68 -1.3 132,717 + MPMX19_03879 0.68 -0.2 132,717 + MPMX19_03879 0.68 +2.6 132,717 + MPMX19_03879 0.68 +1.6 132,717 + MPMX19_03879 0.68 +0.8 132,717 + MPMX19_03879 0.68 +0.1 132,717 + MPMX19_03879 0.68 +1.2 132,717 + MPMX19_03879 0.68 -1.7 132,717 + MPMX19_03879 0.68 -0.2 132,717 + MPMX19_03879 0.68 -0.5 132,718 - MPMX19_03879 0.68 -0.5 132,718 - MPMX19_03879 0.68 +1.8 132,718 - MPMX19_03879 0.68 -0.2 132,718 - MPMX19_03879 0.68 +0.7 132,718 - MPMX19_03879 0.68 -1.2 132,718 - MPMX19_03879 0.68 +1.1 132,718 - MPMX19_03879 0.68 +0.6 132,718 - MPMX19_03879 0.68 +0.3 132,718 - MPMX19_03879 0.68 -1.5 132,736 + MPMX19_03879 0.69 -0.2 132,736 + MPMX19_03879 0.69 +0.7 132,736 + MPMX19_03879 0.69 +1.4 132,736 + MPMX19_03879 0.69 +0.1 132,736 + MPMX19_03879 0.69 +0.1 132,736 + MPMX19_03879 0.69 +0.0 132,736 + MPMX19_03879 0.69 +0.7 132,736 + MPMX19_03879 0.69 -0.0 132,736 + MPMX19_03879 0.69 -0.0 132,736 + MPMX19_03879 0.69 -1.5 132,737 - MPMX19_03879 0.69 -0.7 132,737 - MPMX19_03879 0.69 -0.5 132,737 - MPMX19_03879 0.69 -0.2 132,737 - MPMX19_03879 0.69 -0.2 132,737 - MPMX19_03879 0.69 -0.4 132,737 - MPMX19_03879 0.69 +2.2 132,737 - MPMX19_03879 0.69 +0.5 132,737 - MPMX19_03879 0.69 +0.3 132,737 - MPMX19_03879 0.69 -2.5 132,760 + MPMX19_03879 0.71 +1.5 132,760 + MPMX19_03879 0.71 +0.8 132,760 + MPMX19_03879 0.71 +0.4 132,760 + MPMX19_03879 0.71 +0.8 132,761 - MPMX19_03879 0.71 +0.3 132,761 - MPMX19_03879 0.71 -1.5 132,761 - MPMX19_03879 0.71 -0.7 132,761 - MPMX19_03879 0.71 +0.4 132,761 - MPMX19_03879 0.71 -1.5 132,761 - MPMX19_03879 0.71 -1.2 133,522 + -0.3 133,523 - -0.4 133,669 + MPMX19_03880 0.13 -0.7 133,670 - MPMX19_03880 0.13 -0.3 133,670 - MPMX19_03880 0.13 -0.9 133,670 - MPMX19_03880 0.13 +0.2 134,002 + MPMX19_03880 0.25 -1.0 134,002 + MPMX19_03880 0.25 -0.5 134,002 + MPMX19_03880 0.25 -0.5 134,002 + MPMX19_03880 0.25 +0.4 134,002 + MPMX19_03880 0.25 -0.2 134,002 + MPMX19_03880 0.25 +0.8 134,003 - MPMX19_03880 0.25 -0.4 134,003 - MPMX19_03880 0.25 +0.8 134,003 - MPMX19_03880 0.25 -1.5 134,003 - MPMX19_03880 0.25 -1.7 134,003 - MPMX19_03880 0.25 +0.8 134,003 - MPMX19_03880 0.25 -0.0 134,003 - MPMX19_03880 0.25 -0.5 134,035 + MPMX19_03880 0.26 -1.2 134,035 + MPMX19_03880 0.26 +0.8 134,035 + MPMX19_03880 0.26 -1.3 134,035 + MPMX19_03880 0.26 -0.3 134,036 - MPMX19_03880 0.26 +0.4 134,083 + MPMX19_03880 0.28 -1.0 134,083 + MPMX19_03880 0.28 +0.8 134,083 + MPMX19_03880 0.28 +0.2 134,083 + MPMX19_03880 0.28 -0.3 134,084 - MPMX19_03880 0.28 +0.3 134,084 - MPMX19_03880 0.28 +0.1 134,084 - MPMX19_03880 0.28 -1.2 134,084 - MPMX19_03880 0.28 -0.9 134,125 + MPMX19_03880 0.29 -0.7 134,125 + MPMX19_03880 0.29 -0.0 134,125 + MPMX19_03880 0.29 +0.3 134,125 + MPMX19_03880 0.29 -0.3 134,125 + MPMX19_03880 0.29 +1.4 134,125 + MPMX19_03880 0.29 -0.7 134,125 + MPMX19_03880 0.29 -0.5 134,125 + MPMX19_03880 0.29 -0.2 134,126 - MPMX19_03880 0.29 -0.2 134,126 - MPMX19_03880 0.29 +0.8 134,126 - MPMX19_03880 0.29 -2.3 134,126 - MPMX19_03880 0.29 -0.8 134,126 - MPMX19_03880 0.29 +1.6 134,185 + MPMX19_03880 0.31 -0.7 134,185 + MPMX19_03880 0.31 -0.7 134,185 + MPMX19_03880 0.31 -1.5 134,185 + MPMX19_03880 0.31 -0.9 134,185 + MPMX19_03880 0.31 -2.7 134,185 + MPMX19_03880 0.31 -0.5 134,186 - MPMX19_03880 0.31 -0.1 134,186 - MPMX19_03880 0.31 -0.2 134,186 - MPMX19_03880 0.31 -0.3
Or see this region's nucleotide sequence