Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02127 and MPMX19_02128 overlap by 4 nucleotides MPMX19_02128 and MPMX19_02129 are separated by 131 nucleotides
MPMX19_02127: MPMX19_02127 - hypothetical protein, at 2,225,108 to 2,226,874
_02127
MPMX19_02128: MPMX19_02128 - Lipopolysaccharide assembly protein B, at 2,226,871 to 2,228,220
_02128
MPMX19_02129: MPMX19_02129 - hypothetical protein, at 2,228,352 to 2,230,304
_02129
Position (kb)
2226
2227
2228
2229 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2226.470 kb on + strand, within MPMX19_02127 at 2226.470 kb on + strand, within MPMX19_02127 at 2226.470 kb on + strand, within MPMX19_02127 at 2226.470 kb on + strand, within MPMX19_02127 at 2226.471 kb on - strand, within MPMX19_02127 at 2226.974 kb on - strand at 2227.288 kb on + strand, within MPMX19_02128 at 2227.289 kb on - strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.447 kb on + strand, within MPMX19_02128 at 2227.448 kb on - strand, within MPMX19_02128 at 2227.448 kb on - strand, within MPMX19_02128 at 2227.448 kb on - strand, within MPMX19_02128 at 2227.771 kb on + strand, within MPMX19_02128 at 2227.772 kb on - strand, within MPMX19_02128 at 2227.772 kb on - strand, within MPMX19_02128 at 2227.792 kb on + strand, within MPMX19_02128 at 2227.792 kb on + strand, within MPMX19_02128 at 2227.792 kb on + strand, within MPMX19_02128 at 2227.792 kb on + strand, within MPMX19_02128 at 2227.792 kb on + strand, within MPMX19_02128 at 2227.792 kb on + strand, within MPMX19_02128 at 2227.792 kb on + strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.793 kb on - strand, within MPMX19_02128 at 2227.960 kb on + strand, within MPMX19_02128 at 2227.960 kb on + strand, within MPMX19_02128 at 2227.961 kb on - strand, within MPMX19_02128 at 2228.218 kb on + strand at 2228.218 kb on + strand at 2228.218 kb on + strand at 2228.218 kb on + strand at 2228.219 kb on - strand at 2228.219 kb on - strand at 2228.533 kb on + strand at 2228.533 kb on + strand at 2228.534 kb on - strand at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.803 kb on + strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.804 kb on - strand, within MPMX19_02129 at 2228.821 kb on + strand, within MPMX19_02129 at 2228.822 kb on - strand, within MPMX19_02129 at 2228.822 kb on - strand, within MPMX19_02129 at 2228.822 kb on - strand, within MPMX19_02129 at 2228.822 kb on - strand, within MPMX19_02129 at 2229.041 kb on - strand, within MPMX19_02129
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 2,226,470 + MPMX19_02127 0.77 +2.0 2,226,470 + MPMX19_02127 0.77 +0.8 2,226,470 + MPMX19_02127 0.77 +0.3 2,226,470 + MPMX19_02127 0.77 +0.8 2,226,471 - MPMX19_02127 0.77 -0.2 2,226,974 - -0.8 2,227,288 + MPMX19_02128 0.31 -1.0 2,227,289 - MPMX19_02128 0.31 -1.4 2,227,447 + MPMX19_02128 0.43 +0.3 2,227,447 + MPMX19_02128 0.43 -0.2 2,227,447 + MPMX19_02128 0.43 -0.2 2,227,447 + MPMX19_02128 0.43 -0.2 2,227,447 + MPMX19_02128 0.43 -0.0 2,227,447 + MPMX19_02128 0.43 +0.4 2,227,447 + MPMX19_02128 0.43 +0.8 2,227,447 + MPMX19_02128 0.43 -1.2 2,227,447 + MPMX19_02128 0.43 -0.2 2,227,447 + MPMX19_02128 0.43 +0.8 2,227,447 + MPMX19_02128 0.43 -0.2 2,227,447 + MPMX19_02128 0.43 -0.8 2,227,447 + MPMX19_02128 0.43 -0.2 2,227,447 + MPMX19_02128 0.43 -0.2 2,227,447 + MPMX19_02128 0.43 -0.8 2,227,448 - MPMX19_02128 0.43 -0.2 2,227,448 - MPMX19_02128 0.43 -0.5 2,227,448 - MPMX19_02128 0.43 +0.5 2,227,771 + MPMX19_02128 0.67 +0.4 2,227,772 - MPMX19_02128 0.67 +0.4 2,227,772 - MPMX19_02128 0.67 -1.2 2,227,792 + MPMX19_02128 0.68 +0.4 2,227,792 + MPMX19_02128 0.68 -0.6 2,227,792 + MPMX19_02128 0.68 -0.8 2,227,792 + MPMX19_02128 0.68 +0.8 2,227,792 + MPMX19_02128 0.68 -1.2 2,227,792 + MPMX19_02128 0.68 -1.2 2,227,792 + MPMX19_02128 0.68 -1.2 2,227,793 - MPMX19_02128 0.68 -1.2 2,227,793 - MPMX19_02128 0.68 -1.2 2,227,793 - MPMX19_02128 0.68 -1.4 2,227,793 - MPMX19_02128 0.68 -0.8 2,227,793 - MPMX19_02128 0.68 -1.2 2,227,793 - MPMX19_02128 0.68 +0.4 2,227,793 - MPMX19_02128 0.68 +0.8 2,227,793 - MPMX19_02128 0.68 -0.7 2,227,793 - MPMX19_02128 0.68 -1.5 2,227,960 + MPMX19_02128 0.81 -0.7 2,227,960 + MPMX19_02128 0.81 -1.2 2,227,961 - MPMX19_02128 0.81 +1.8 2,228,218 + +0.8 2,228,218 + +0.6 2,228,218 + -0.6 2,228,218 + +1.2 2,228,219 - -0.8 2,228,219 - +0.4 2,228,533 + +0.5 2,228,533 + +0.1 2,228,534 - -1.5 2,228,803 + MPMX19_02129 0.23 -0.2 2,228,803 + MPMX19_02129 0.23 -1.2 2,228,803 + MPMX19_02129 0.23 +0.9 2,228,803 + MPMX19_02129 0.23 +2.1 2,228,803 + MPMX19_02129 0.23 -1.2 2,228,803 + MPMX19_02129 0.23 +0.6 2,228,803 + MPMX19_02129 0.23 -1.5 2,228,803 + MPMX19_02129 0.23 +1.6 2,228,803 + MPMX19_02129 0.23 -0.4 2,228,803 + MPMX19_02129 0.23 +0.4 2,228,803 + MPMX19_02129 0.23 -1.5 2,228,803 + MPMX19_02129 0.23 +1.8 2,228,803 + MPMX19_02129 0.23 +1.4 2,228,804 - MPMX19_02129 0.23 +0.8 2,228,804 - MPMX19_02129 0.23 -1.0 2,228,804 - MPMX19_02129 0.23 -0.5 2,228,804 - MPMX19_02129 0.23 -1.0 2,228,804 - MPMX19_02129 0.23 +1.2 2,228,804 - MPMX19_02129 0.23 +0.5 2,228,804 - MPMX19_02129 0.23 -0.8 2,228,804 - MPMX19_02129 0.23 +0.8 2,228,804 - MPMX19_02129 0.23 +0.8 2,228,804 - MPMX19_02129 0.23 -0.2 2,228,804 - MPMX19_02129 0.23 -0.2 2,228,821 + MPMX19_02129 0.24 +0.8 2,228,822 - MPMX19_02129 0.24 -0.5 2,228,822 - MPMX19_02129 0.24 -1.4 2,228,822 - MPMX19_02129 0.24 +0.6 2,228,822 - MPMX19_02129 0.24 -2.0 2,229,041 - MPMX19_02129 0.35 -0.4
Or see this region's nucleotide sequence