Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00076

Experiment: NLN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NLN
				remove
80,143	+	MPMX19_00075	0.21	-0.0
80,143	+	MPMX19_00075	0.21	+0.8
80,201	-	MPMX19_00075	0.27	+0.4
80,223	+	MPMX19_00075	0.29	-0.6
80,223	+	MPMX19_00075	0.29	+1.7
80,224	-	MPMX19_00075	0.29	+0.1
80,224	-	MPMX19_00075	0.29	+0.8
80,224	-	MPMX19_00075	0.29	-1.2
80,224	-	MPMX19_00075	0.29	+0.8
80,332	+	MPMX19_00075	0.41	-0.5
80,332	+	MPMX19_00075	0.41	-0.2
80,332	+	MPMX19_00075	0.41	-1.7
80,332	+	MPMX19_00075	0.41	-0.5
80,333	-	MPMX19_00075	0.41	-1.2
80,333	-	MPMX19_00075	0.41	-2.9
80,333	-	MPMX19_00075	0.41	-0.4
80,333	-	MPMX19_00075	0.41	-0.1
80,385	+	MPMX19_00075	0.47	-2.0
80,385	+	MPMX19_00075	0.47	-0.2
80,385	+	MPMX19_00075	0.47	-0.5
80,385	+	MPMX19_00075	0.47	-0.5
80,385	+	MPMX19_00075	0.47	+0.2
80,385	+	MPMX19_00075	0.47	-1.4
80,386	-	MPMX19_00075	0.47	-1.0
80,386	-	MPMX19_00075	0.47	+1.7
80,386	-	MPMX19_00075	0.47	+0.5
80,386	-	MPMX19_00075	0.47	-0.7
80,386	-	MPMX19_00075	0.47	+1.8
80,386	-	MPMX19_00075	0.47	-0.9
80,386	-	MPMX19_00075	0.47	+1.6
80,665	+	MPMX19_00075	0.77	+0.8
80,665	+	MPMX19_00075	0.77	-1.7
80,665	+	MPMX19_00075	0.77	+0.3
80,666	-	MPMX19_00075	0.77	-0.4
80,666	-	MPMX19_00075	0.77	-0.0
80,666	-	MPMX19_00075	0.77	+0.3
80,666	-	MPMX19_00075	0.77	+2.1
80,666	-	MPMX19_00075	0.77	+0.0
80,666	-	MPMX19_00075	0.77	+0.1
80,666	-	MPMX19_00075	0.77	-0.9
80,707	+	MPMX19_00075	0.82	-0.2
80,707	+	MPMX19_00075	0.82	-0.5
80,707	+	MPMX19_00075	0.82	-0.1
80,707	+	MPMX19_00075	0.82	+0.2
80,707	+	MPMX19_00075	0.82	-0.5
80,707	+	MPMX19_00075	0.82	-1.2
80,707	+	MPMX19_00075	0.82	-0.5
80,707	+	MPMX19_00075	0.82	-0.9
80,707	+	MPMX19_00075	0.82	+0.4
80,707	+	MPMX19_00075	0.82	-0.7
80,707	+	MPMX19_00075	0.82	-0.9
80,707	+	MPMX19_00075	0.82	+1.8
80,707	+	MPMX19_00075	0.82	+0.2
80,707	+	MPMX19_00075	0.82	-1.2
80,707	+	MPMX19_00075	0.82	+0.0
80,707	+	MPMX19_00075	0.82	-1.7
80,707	+	MPMX19_00075	0.82	+0.1
80,707	+	MPMX19_00075	0.82	-0.5
80,707	+	MPMX19_00075	0.82	+0.5
80,707	+	MPMX19_00075	0.82	-0.9
80,707	+	MPMX19_00075	0.82	+0.3
80,708	-	MPMX19_00075	0.82	+0.6
80,708	-	MPMX19_00075	0.82	+0.8
80,708	-	MPMX19_00075	0.82	-0.6
80,708	-	MPMX19_00075	0.82	+0.3
80,708	-	MPMX19_00075	0.82	+0.8
80,708	-	MPMX19_00075	0.82	-1.7
80,708	-	MPMX19_00075	0.82	-0.6
80,708	-	MPMX19_00075	0.82	-0.2
80,708	-	MPMX19_00075	0.82	-0.0
80,708	-	MPMX19_00075	0.82	-0.6
80,708	-	MPMX19_00075	0.82	+0.5
80,708	-	MPMX19_00075	0.82	+0.7
80,708	-	MPMX19_00075	0.82	-0.3
80,708	-	MPMX19_00075	0.82	-0.7
80,708	-	MPMX19_00075	0.82	+0.8
80,708	-	MPMX19_00075	0.82	-0.0
80,821	+			+1.8
80,821	+			+1.1
80,822	-			-0.6
80,822	-			+0.5
80,822	-			-0.3
80,936	+			-1.2
80,936	+			-0.5
80,936	+			-0.2
80,936	+			+0.7
80,936	+			+0.0
80,936	+			-1.7
80,937	-			+1.1
80,937	-			+0.0
80,937	-			-1.2
80,937	-			-0.9
81,347	+	MPMX19_00076	0.24	+1.3
81,347	+	MPMX19_00076	0.24	-0.7
81,348	-	MPMX19_00076	0.24	-0.7
81,348	-	MPMX19_00076	0.24	-0.9
81,348	-	MPMX19_00076	0.24	-2.3
81,374	+	MPMX19_00076	0.25	+0.8
81,374	+	MPMX19_00076	0.25	+0.3
81,374	+	MPMX19_00076	0.25	-0.7
81,374	+	MPMX19_00076	0.25	-0.7
81,374	+	MPMX19_00076	0.25	+0.5
81,374	+	MPMX19_00076	0.25	-0.3
81,374	+	MPMX19_00076	0.25	-0.7
81,374	+	MPMX19_00076	0.25	+1.1
81,374	+	MPMX19_00076	0.25	+0.5
81,374	+	MPMX19_00076	0.25	-0.7
81,374	+	MPMX19_00076	0.25	-1.4
81,374	+	MPMX19_00076	0.25	-0.2
81,374	+	MPMX19_00076	0.25	+0.1
81,374	+	MPMX19_00076	0.25	+0.1
81,374	+	MPMX19_00076	0.25	-0.7
81,374	+	MPMX19_00076	0.25	-0.6
81,374	+	MPMX19_00076	0.25	-0.4
81,374	+	MPMX19_00076	0.25	+0.3
81,375	-	MPMX19_00076	0.25	+0.1
81,375	-	MPMX19_00076	0.25	-0.3
81,375	-	MPMX19_00076	0.25	-1.4
81,375	-	MPMX19_00076	0.25	+1.6
81,375	-	MPMX19_00076	0.25	+0.4
81,375	-	MPMX19_00076	0.25	-0.5
81,375	-	MPMX19_00076	0.25	+0.6
81,375	-	MPMX19_00076	0.25	+0.8
81,375	-	MPMX19_00076	0.25	+0.6
81,375	-	MPMX19_00076	0.25	-0.4
81,375	-	MPMX19_00076	0.25	+0.1
81,375	-	MPMX19_00076	0.25	-0.5
81,488	+	MPMX19_00076	0.31	-0.9
81,488	+	MPMX19_00076	0.31	+0.4
81,488	+	MPMX19_00076	0.31	+0.4
81,488	+	MPMX19_00076	0.31	-0.9
81,488	+	MPMX19_00076	0.31	-0.2
81,488	+	MPMX19_00076	0.31	-1.3
81,488	+	MPMX19_00076	0.31	+0.4
81,488	+	MPMX19_00076	0.31	-0.2
81,488	+	MPMX19_00076	0.31	-0.8
81,488	+	MPMX19_00076	0.31	-1.4
81,488	+	MPMX19_00076	0.31	-0.7
81,488	+	MPMX19_00076	0.31	-0.7
81,488	+	MPMX19_00076	0.31	+1.3
81,488	+	MPMX19_00076	0.31	-0.6
81,488	+	MPMX19_00076	0.31	-0.4
81,488	+	MPMX19_00076	0.31	+0.5
81,488	+	MPMX19_00076	0.31	+0.8
81,489	-	MPMX19_00076	0.32	-0.6
81,489	-	MPMX19_00076	0.32	-0.5
81,489	-	MPMX19_00076	0.32	-1.7
81,489	-	MPMX19_00076	0.32	-0.2
81,489	-	MPMX19_00076	0.32	-0.3
81,489	-	MPMX19_00076	0.32	+0.3
81,489	-	MPMX19_00076	0.32	+0.4
81,489	-	MPMX19_00076	0.32	+0.4
81,489	-	MPMX19_00076	0.32	+0.3
81,489	-	MPMX19_00076	0.32	+0.1
81,489	-	MPMX19_00076	0.32	+0.8
81,489	-	MPMX19_00076	0.32	-1.7
81,489	-	MPMX19_00076	0.32	-0.0
81,489	-	MPMX19_00076	0.32	+1.6
81,489	-	MPMX19_00076	0.32	-1.7
81,489	-	MPMX19_00076	0.32	+0.8
81,489	-	MPMX19_00076	0.32	+0.4
81,489	-	MPMX19_00076	0.32	-0.0
81,489	-	MPMX19_00076	0.32	+1.1
81,489	-	MPMX19_00076	0.32	-0.3
81,489	-	MPMX19_00076	0.32	+0.2
81,489	-	MPMX19_00076	0.32	+0.0
81,489	-	MPMX19_00076	0.32	-0.7
81,489	-	MPMX19_00076	0.32	+0.8
81,489	-	MPMX19_00076	0.32	+0.7
81,521	+	MPMX19_00076	0.33	-0.7
81,521	+	MPMX19_00076	0.33	-2.0
81,521	+	MPMX19_00076	0.33	-1.2
81,521	+	MPMX19_00076	0.33	-0.4
81,522	-	MPMX19_00076	0.33	-0.5
81,522	-	MPMX19_00076	0.33	+1.2
81,522	-	MPMX19_00076	0.33	-1.2
81,522	-	MPMX19_00076	0.33	-0.5
81,522	-	MPMX19_00076	0.33	+0.1
81,791	+	MPMX19_00076	0.48	-0.2
81,791	+	MPMX19_00076	0.48	-1.7
81,791	+	MPMX19_00076	0.48	+0.6
81,791	+	MPMX19_00076	0.48	-1.5
81,791	+	MPMX19_00076	0.48	+0.7
81,791	+	MPMX19_00076	0.48	-0.7
81,791	+	MPMX19_00076	0.48	+0.6
81,791	+	MPMX19_00076	0.48	-0.2
81,791	+	MPMX19_00076	0.48	+0.3
81,791	+	MPMX19_00076	0.48	+1.2
81,791	+	MPMX19_00076	0.48	-2.5
81,791	+	MPMX19_00076	0.48	-0.1
81,791	+	MPMX19_00076	0.48	+0.4
81,791	+	MPMX19_00076	0.48	+0.4
81,791	+	MPMX19_00076	0.48	+1.1
81,791	+	MPMX19_00076	0.48	-0.5
81,791	+	MPMX19_00076	0.48	-1.2
81,791	+	MPMX19_00076	0.48	-0.0
81,791	+	MPMX19_00076	0.48	+0.0
81,791	+	MPMX19_00076	0.48	-0.2
81,792	-	MPMX19_00076	0.48	-0.6
81,792	-	MPMX19_00076	0.48	-0.2
81,792	-	MPMX19_00076	0.48	-1.7
81,792	-	MPMX19_00076	0.48	-1.0
81,792	-	MPMX19_00076	0.48	+0.8
81,792	-	MPMX19_00076	0.48	+0.3
81,792	-	MPMX19_00076	0.48	-1.0
81,792	-	MPMX19_00076	0.48	-0.6
81,792	-	MPMX19_00076	0.48	+0.4
81,792	-	MPMX19_00076	0.48	-0.4
81,792	-	MPMX19_00076	0.48	+0.3
81,792	-	MPMX19_00076	0.48	+0.0
81,792	-	MPMX19_00076	0.48	+0.3
81,792	-	MPMX19_00076	0.48	-0.3
81,792	-	MPMX19_00076	0.48	+0.3
81,792	-	MPMX19_00076	0.48	+0.8
81,792	-	MPMX19_00076	0.48	-1.2
81,863	+	MPMX19_00076	0.52	+1.8
81,863	+	MPMX19_00076	0.52	+0.8
81,863	+	MPMX19_00076	0.52	+0.3
81,863	+	MPMX19_00076	0.52	-2.0
81,864	-	MPMX19_00076	0.52	+0.6
81,864	-	MPMX19_00076	0.52	-1.7
81,864	-	MPMX19_00076	0.52	+0.6
81,881	+	MPMX19_00076	0.53	-1.7
81,881	+	MPMX19_00076	0.53	-0.2
81,882	-	MPMX19_00076	0.53	-0.5
81,882	-	MPMX19_00076	0.53	+1.8
82,016	+	MPMX19_00076	0.60	+0.3
82,016	+	MPMX19_00076	0.60	+0.4
82,016	+	MPMX19_00076	0.60	+0.3
82,016	+	MPMX19_00076	0.60	+0.7
82,016	+	MPMX19_00076	0.60	+0.6
82,017	-	MPMX19_00076	0.61	-0.6
82,017	-	MPMX19_00076	0.61	+0.3
82,017	-	MPMX19_00076	0.61	+2.2
82,017	-	MPMX19_00076	0.61	+0.0
82,017	-	MPMX19_00076	0.61	+1.2
82,017	-	MPMX19_00076	0.61	+0.1
82,017	-	MPMX19_00076	0.61	-0.4
82,241	+	MPMX19_00076	0.73	+0.3
82,241	+	MPMX19_00076	0.73	-0.4
82,241	+	MPMX19_00076	0.73	-0.4
82,241	+	MPMX19_00076	0.73	-0.0
82,241	+	MPMX19_00076	0.73	-0.2
82,241	+	MPMX19_00076	0.73	-0.6
82,242	-	MPMX19_00076	0.73	+0.8
82,242	-	MPMX19_00076	0.73	-0.3
82,242	-	MPMX19_00076	0.73	+0.1
82,242	-	MPMX19_00076	0.73	-1.3
82,242	-	MPMX19_00076	0.73	-0.4
82,242	-	MPMX19_00076	0.73	+0.6
82,242	-	MPMX19_00076	0.73	+0.1
82,242	-	MPMX19_00076	0.73	-2.2
82,366	+	MPMX19_00076	0.80	+1.2
82,366	+	MPMX19_00076	0.80	-1.0
82,366	+	MPMX19_00076	0.80	+0.1
82,366	+	MPMX19_00076	0.80	+0.7
82,366	+	MPMX19_00076	0.80	+0.8
82,366	+	MPMX19_00076	0.80	-1.2
82,367	-	MPMX19_00076	0.80	-1.5
82,367	-	MPMX19_00076	0.80	+0.5
82,367	-	MPMX19_00076	0.80	-0.5
82,367	-	MPMX19_00076	0.80	+1.2
82,628	+			-1.2
82,628	+			+0.1
82,628	+			-1.5
82,628	+			+0.5
82,628	+			-0.7
82,628	+			-1.0
82,628	+			-0.6
82,628	+			-0.7
82,629	-			+0.0
82,629	-			+0.1
82,629	-			-1.7
82,629	-			+0.4
82,629	-			-0.5
82,629	-			-0.3
83,122	+	MPMX19_00077	0.67	-1.0
83,122	+	MPMX19_00077	0.67	-0.2
83,122	+	MPMX19_00077	0.67	+0.6
83,122	+	MPMX19_00077	0.67	-0.2
83,122	+	MPMX19_00077	0.67	+0.5
83,122	+	MPMX19_00077	0.67	-0.2
83,122	+	MPMX19_00077	0.67	+0.3
83,122	+	MPMX19_00077	0.67	-0.7
83,122	+	MPMX19_00077	0.67	+0.2
83,123	-	MPMX19_00077	0.68	+1.4
83,123	-	MPMX19_00077	0.68	-1.3
83,123	-	MPMX19_00077	0.68	-1.3
83,123	-	MPMX19_00077	0.68	-0.5
83,123	-	MPMX19_00077	0.68	-0.8
83,123	-	MPMX19_00077	0.68	+1.4
83,123	-	MPMX19_00077	0.68	+0.3
83,123	-	MPMX19_00077	0.68	-0.7
83,123	-	MPMX19_00077	0.68	-0.5
83,123	-	MPMX19_00077	0.68	-0.2
83,123	-	MPMX19_00077	0.68	-0.2
83,123	-	MPMX19_00077	0.68	-1.2
83,123	-	MPMX19_00077	0.68	+0.3
83,123	-	MPMX19_00077	0.68	+0.3
83,123	-	MPMX19_00077	0.68	-1.0
83,123	-	MPMX19_00077	0.68	+1.2
83,123	-	MPMX19_00077	0.68	+1.8
83,123	-	MPMX19_00077	0.68	-0.2
83,123	-	MPMX19_00077	0.68	-0.2
83,230	+	MPMX19_00077	0.84	+0.3
83,230	+	MPMX19_00077	0.84	-0.2
83,230	+	MPMX19_00077	0.84	-0.1
83,230	+	MPMX19_00077	0.84	-0.5
83,230	+	MPMX19_00077	0.84	-0.2
83,230	+	MPMX19_00077	0.84	+0.8
83,230	+	MPMX19_00077	0.84	+1.0
83,231	-	MPMX19_00077	0.84	+0.1
83,231	-	MPMX19_00077	0.84	-0.6
83,231	-	MPMX19_00077	0.84	-0.2
83,305	+			+0.1
83,305	+			-0.5
83,305	+			-0.7
83,396	+			+1.1
83,396	+			-0.7
83,396	+			+0.8
83,396	+			+0.4
83,396	+			+1.0
83,396	+			+0.0
83,396	+			-0.5
83,396	+			-2.0
83,396	+			-0.2
83,396	+			-0.7
83,396	+			-2.5
83,396	+			+1.3
83,396	+			-0.4
83,396	+			+1.2
83,396	+			+0.7
83,396	+			+1.6
83,396	+			+0.4
83,396	+			+0.6
83,396	+			+0.6
83,396	+			-0.6
83,396	+			-0.2
83,396	+			+1.4
83,396	+			+1.6
83,396	+			-0.2
83,396	+			+0.4
83,396	+			+0.4
83,396	+			-0.3
83,396	+			+0.8
83,397	-			-0.3
83,397	-			-1.3
83,397	-			+2.1
83,397	-			+0.3
83,397	-			+0.2
83,397	-			-0.2
83,397	-			+0.5
83,397	-			-0.5
83,397	-			+0.3
83,397	-			-0.2
83,397	-			+0.1
83,397	-			-0.2
83,397	-			-1.0
83,397	-			+0.8
83,397	-			+0.6
83,397	-			-1.3
83,397	-			-1.5
83,397	-			-1.1
83,397	-			+0.8
83,397	-			+1.7
83,397	-			-2.1
83,397	-			-1.2
83,397	-			+0.8
83,397	-			-2.0
83,400	+			-0.7
83,400	+			-0.6
83,400	+			-0.6
83,400	+			-0.7
83,400	+			+1.6
83,400	+			+0.3
83,400	+			-0.8
83,400	+			-0.2
83,400	+			+0.3
83,400	+			+0.3
83,400	+			+0.8
83,400	+			-0.7
83,400	+			-0.7
83,400	+			-0.7
83,401	-			+1.2
83,401	-			-0.3
83,401	-			+0.4
83,401	-			+0.4
83,401	-			+0.4
83,401	-			+0.3
83,401	-			-0.6
83,401	-			+0.3
83,401	-			-0.4
83,401	-			-1.3
83,401	-			+0.4
83,401	-			-0.7
83,401	-			-0.5
83,707	+	MPMX19_00078	0.31	+0.3
83,707	+	MPMX19_00078	0.31	-1.5
83,707	+	MPMX19_00078	0.31	-1.2
83,707	+	MPMX19_00078	0.31	-0.9
83,708	-	MPMX19_00078	0.31	+2.3
83,708	-	MPMX19_00078	0.31	-0.5
83,708	-	MPMX19_00078	0.31	+1.3
83,708	-	MPMX19_00078	0.31	-0.2
83,708	-	MPMX19_00078	0.31	-0.1
83,708	-	MPMX19_00078	0.31	+0.1
83,708	-	MPMX19_00078	0.31	+0.1
83,728	+	MPMX19_00078	0.34	-0.5
83,728	+	MPMX19_00078	0.34	-1.7
83,728	+	MPMX19_00078	0.34	-1.2
83,729	-	MPMX19_00078	0.34	-0.8

Or see this region's nucleotide sequence