Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06840

Experiment: NLN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06839 and MPMX19_06840 overlap by 1 nucleotidesMPMX19_06840 and MPMX19_06841 overlap by 4 nucleotides MPMX19_06839: MPMX19_06839 - Glutathione import ATP-binding protein GsiA, at 104,499 to 106,148 _06839 MPMX19_06840: MPMX19_06840 - Glutathione transport system permease protein GsiD, at 106,148 to 107,038 _06840 MPMX19_06841: MPMX19_06841 - Glutathione transport system permease protein GsiC, at 107,035 to 107,985 _06841 Position (kb) 106 107 108Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 105.297 kb on + strand, within MPMX19_06839at 105.298 kb on - strand, within MPMX19_06839at 105.397 kb on + strand, within MPMX19_06839at 105.397 kb on + strand, within MPMX19_06839at 105.398 kb on - strand, within MPMX19_06839at 105.398 kb on - strand, within MPMX19_06839at 105.398 kb on - strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.517 kb on + strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.518 kb on - strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.865 kb on + strand, within MPMX19_06839at 105.866 kb on - strand, within MPMX19_06839at 105.866 kb on - strand, within MPMX19_06839at 105.866 kb on - strand, within MPMX19_06839at 106.309 kb on - strand, within MPMX19_06840at 106.309 kb on - strand, within MPMX19_06840at 106.437 kb on + strand, within MPMX19_06840at 106.437 kb on + strand, within MPMX19_06840at 106.438 kb on - strand, within MPMX19_06840at 106.438 kb on - strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.536 kb on + strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.537 kb on - strand, within MPMX19_06840at 106.752 kb on + strand, within MPMX19_06840at 106.764 kb on + strand, within MPMX19_06840at 106.764 kb on + strand, within MPMX19_06840at 106.764 kb on + strand, within MPMX19_06840at 106.764 kb on + strand, within MPMX19_06840at 106.765 kb on - strand, within MPMX19_06840at 106.765 kb on - strand, within MPMX19_06840at 106.765 kb on - strand, within MPMX19_06840at 106.797 kb on + strand, within MPMX19_06840at 106.797 kb on + strand, within MPMX19_06840at 106.797 kb on + strand, within MPMX19_06840at 106.881 kb on + strand, within MPMX19_06840at 106.881 kb on + strand, within MPMX19_06840at 106.881 kb on + strand, within MPMX19_06840at 106.882 kb on - strand, within MPMX19_06840at 106.956 kb on + strandat 107.096 kb on + strandat 107.187 kb on - strand, within MPMX19_06841at 107.229 kb on - strand, within MPMX19_06841at 107.229 kb on - strand, within MPMX19_06841at 107.229 kb on - strand, within MPMX19_06841at 107.339 kb on + strand, within MPMX19_06841at 107.340 kb on - strand, within MPMX19_06841at 107.340 kb on - strand, within MPMX19_06841at 107.340 kb on - strand, within MPMX19_06841at 107.340 kb on - strand, within MPMX19_06841at 107.340 kb on - strand, within MPMX19_06841at 107.340 kb on - strand, within MPMX19_06841at 107.432 kb on + strand, within MPMX19_06841at 107.468 kb on + strand, within MPMX19_06841at 107.468 kb on + strand, within MPMX19_06841at 107.468 kb on + strand, within MPMX19_06841at 107.468 kb on + strand, within MPMX19_06841at 107.468 kb on + strand, within MPMX19_06841at 107.468 kb on + strand, within MPMX19_06841at 107.468 kb on + strand, within MPMX19_06841at 107.469 kb on - strand, within MPMX19_06841at 107.469 kb on - strand, within MPMX19_06841at 107.469 kb on - strand, within MPMX19_06841at 107.469 kb on - strand, within MPMX19_06841at 107.469 kb on - strand, within MPMX19_06841at 107.469 kb on - strand, within MPMX19_06841at 107.469 kb on - strand, within MPMX19_06841at 107.501 kb on + strand, within MPMX19_06841at 107.591 kb on + strand, within MPMX19_06841at 107.592 kb on - strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.721 kb on + strand, within MPMX19_06841at 107.722 kb on - strand, within MPMX19_06841at 107.722 kb on - strand, within MPMX19_06841at 107.722 kb on - strand, within MPMX19_06841at 107.722 kb on - strand, within MPMX19_06841at 107.732 kb on + strand, within MPMX19_06841at 107.732 kb on + strand, within MPMX19_06841at 107.732 kb on + strand, within MPMX19_06841at 107.733 kb on - strand, within MPMX19_06841at 107.775 kb on - strand, within MPMX19_06841at 107.917 kb on + strandat 107.917 kb on + strandat 107.918 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NLN
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105,297 + MPMX19_06839 0.48 -1.0
105,298 - MPMX19_06839 0.48 +1.3
105,397 + MPMX19_06839 0.54 -0.1
105,397 + MPMX19_06839 0.54 -0.8
105,398 - MPMX19_06839 0.54 +0.5
105,398 - MPMX19_06839 0.54 +0.2
105,398 - MPMX19_06839 0.54 -0.0
105,517 + MPMX19_06839 0.62 -0.3
105,517 + MPMX19_06839 0.62 -0.2
105,517 + MPMX19_06839 0.62 -0.2
105,517 + MPMX19_06839 0.62 +0.6
105,517 + MPMX19_06839 0.62 +1.1
105,517 + MPMX19_06839 0.62 -2.0
105,517 + MPMX19_06839 0.62 +0.3
105,517 + MPMX19_06839 0.62 -1.2
105,517 + MPMX19_06839 0.62 +0.6
105,517 + MPMX19_06839 0.62 +0.1
105,518 - MPMX19_06839 0.62 -1.1
105,518 - MPMX19_06839 0.62 -1.2
105,518 - MPMX19_06839 0.62 +1.4
105,518 - MPMX19_06839 0.62 -0.7
105,518 - MPMX19_06839 0.62 -0.1
105,518 - MPMX19_06839 0.62 -0.7
105,518 - MPMX19_06839 0.62 -0.8
105,518 - MPMX19_06839 0.62 +0.6
105,518 - MPMX19_06839 0.62 -0.4
105,865 + MPMX19_06839 0.83 +0.0
105,865 + MPMX19_06839 0.83 -1.8
105,865 + MPMX19_06839 0.83 +0.1
105,865 + MPMX19_06839 0.83 -1.2
105,865 + MPMX19_06839 0.83 -1.7
105,865 + MPMX19_06839 0.83 -0.0
105,865 + MPMX19_06839 0.83 -3.2
105,865 + MPMX19_06839 0.83 +1.6
105,866 - MPMX19_06839 0.83 +1.1
105,866 - MPMX19_06839 0.83 -0.4
105,866 - MPMX19_06839 0.83 -0.0
106,309 - MPMX19_06840 0.18 -0.7
106,309 - MPMX19_06840 0.18 -1.4
106,437 + MPMX19_06840 0.32 -1.2
106,437 + MPMX19_06840 0.32 +1.1
106,438 - MPMX19_06840 0.33 -0.2
106,438 - MPMX19_06840 0.33 -1.2
106,536 + MPMX19_06840 0.44 -0.0
106,536 + MPMX19_06840 0.44 -1.0
106,536 + MPMX19_06840 0.44 -2.2
106,536 + MPMX19_06840 0.44 -0.9
106,536 + MPMX19_06840 0.44 -1.3
106,536 + MPMX19_06840 0.44 +0.1
106,536 + MPMX19_06840 0.44 +0.2
106,536 + MPMX19_06840 0.44 +2.0
106,536 + MPMX19_06840 0.44 -0.8
106,536 + MPMX19_06840 0.44 -1.6
106,536 + MPMX19_06840 0.44 +1.6
106,536 + MPMX19_06840 0.44 +0.0
106,537 - MPMX19_06840 0.44 +0.2
106,537 - MPMX19_06840 0.44 -0.0
106,537 - MPMX19_06840 0.44 -0.4
106,537 - MPMX19_06840 0.44 +0.6
106,537 - MPMX19_06840 0.44 -3.1
106,537 - MPMX19_06840 0.44 -1.2
106,537 - MPMX19_06840 0.44 -1.4
106,537 - MPMX19_06840 0.44 +0.8
106,537 - MPMX19_06840 0.44 +1.0
106,537 - MPMX19_06840 0.44 +0.1
106,537 - MPMX19_06840 0.44 -1.0
106,537 - MPMX19_06840 0.44 +2.1
106,537 - MPMX19_06840 0.44 -0.6
106,537 - MPMX19_06840 0.44 -0.2
106,537 - MPMX19_06840 0.44 -1.0
106,537 - MPMX19_06840 0.44 -0.4
106,537 - MPMX19_06840 0.44 -0.2
106,537 - MPMX19_06840 0.44 -0.0
106,537 - MPMX19_06840 0.44 -1.9
106,537 - MPMX19_06840 0.44 -0.1
106,537 - MPMX19_06840 0.44 -0.4
106,537 - MPMX19_06840 0.44 -0.3
106,537 - MPMX19_06840 0.44 -0.4
106,537 - MPMX19_06840 0.44 +0.2
106,537 - MPMX19_06840 0.44 -1.0
106,537 - MPMX19_06840 0.44 -0.2
106,537 - MPMX19_06840 0.44 +0.2
106,537 - MPMX19_06840 0.44 -0.4
106,537 - MPMX19_06840 0.44 -0.8
106,537 - MPMX19_06840 0.44 -0.4
106,537 - MPMX19_06840 0.44 -0.3
106,752 + MPMX19_06840 0.68 -1.4
106,764 + MPMX19_06840 0.69 -1.2
106,764 + MPMX19_06840 0.69 +1.0
106,764 + MPMX19_06840 0.69 +2.6
106,764 + MPMX19_06840 0.69 -0.3
106,765 - MPMX19_06840 0.69 -0.6
106,765 - MPMX19_06840 0.69 -1.2
106,765 - MPMX19_06840 0.69 -1.4
106,797 + MPMX19_06840 0.73 -1.6
106,797 + MPMX19_06840 0.73 +0.6
106,797 + MPMX19_06840 0.73 +0.2
106,881 + MPMX19_06840 0.82 -1.9
106,881 + MPMX19_06840 0.82 -0.2
106,881 + MPMX19_06840 0.82 -0.3
106,882 - MPMX19_06840 0.82 -0.6
106,956 + -0.2
107,096 + -0.6
107,187 - MPMX19_06841 0.16 -0.8
107,229 - MPMX19_06841 0.20 -0.0
107,229 - MPMX19_06841 0.20 +0.1
107,229 - MPMX19_06841 0.20 +0.4
107,339 + MPMX19_06841 0.32 -0.4
107,340 - MPMX19_06841 0.32 -0.2
107,340 - MPMX19_06841 0.32 -0.8
107,340 - MPMX19_06841 0.32 -0.8
107,340 - MPMX19_06841 0.32 -0.1
107,340 - MPMX19_06841 0.32 +0.7
107,340 - MPMX19_06841 0.32 +0.2
107,432 + MPMX19_06841 0.42 -0.0
107,468 + MPMX19_06841 0.46 +0.2
107,468 + MPMX19_06841 0.46 -0.1
107,468 + MPMX19_06841 0.46 -0.0
107,468 + MPMX19_06841 0.46 -0.8
107,468 + MPMX19_06841 0.46 -0.4
107,468 + MPMX19_06841 0.46 -2.8
107,468 + MPMX19_06841 0.46 +1.1
107,469 - MPMX19_06841 0.46 +0.8
107,469 - MPMX19_06841 0.46 -1.4
107,469 - MPMX19_06841 0.46 -0.4
107,469 - MPMX19_06841 0.46 -0.4
107,469 - MPMX19_06841 0.46 -0.8
107,469 - MPMX19_06841 0.46 -0.3
107,469 - MPMX19_06841 0.46 -0.8
107,501 + MPMX19_06841 0.49 +0.1
107,591 + MPMX19_06841 0.58 -1.0
107,592 - MPMX19_06841 0.59 -0.3
107,721 + MPMX19_06841 0.72 +0.7
107,721 + MPMX19_06841 0.72 +0.4
107,721 + MPMX19_06841 0.72 -1.4
107,721 + MPMX19_06841 0.72 +0.6
107,721 + MPMX19_06841 0.72 -2.2
107,721 + MPMX19_06841 0.72 -1.8
107,721 + MPMX19_06841 0.72 -0.0
107,721 + MPMX19_06841 0.72 -0.2
107,722 - MPMX19_06841 0.72 +0.1
107,722 - MPMX19_06841 0.72 -0.3
107,722 - MPMX19_06841 0.72 -0.4
107,722 - MPMX19_06841 0.72 -1.7
107,732 + MPMX19_06841 0.73 -0.1
107,732 + MPMX19_06841 0.73 +0.8
107,732 + MPMX19_06841 0.73 -0.9
107,733 - MPMX19_06841 0.73 -0.9
107,775 - MPMX19_06841 0.78 -0.6
107,917 + -0.1
107,917 + +0.9
107,918 - -1.8

Or see this region's nucleotide sequence