Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06184 and MPMX19_06185 are separated by 193 nucleotides MPMX19_06185 and MPMX19_06186 are separated by 155 nucleotides MPMX19_06186 and MPMX19_06187 are separated by 3 nucleotides MPMX19_06187 and MPMX19_06188 are separated by 2 nucleotides
MPMX19_06184: MPMX19_06184 - hypothetical protein, at 374,314 to 375,471
_06184
MPMX19_06185: MPMX19_06185 - hypothetical protein, at 375,665 to 375,964
_06185
MPMX19_06186: MPMX19_06186 - Flagellar biosynthetic protein FlhB, at 376,120 to 377,202
_06186
MPMX19_06187: MPMX19_06187 - hypothetical protein, at 377,206 to 377,976
_06187
MPMX19_06188: MPMX19_06188 - Flagellar biosynthesis protein FlhA, at 377,979 to 380,072
_06188
Position (kb) 376
377
378 Strain fitness (log2 ratio) -2
-1
0
1
2 at 375.637 kb on - strand at 375.666 kb on + strand at 375.666 kb on + strand at 375.666 kb on + strand at 375.666 kb on + strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.667 kb on - strand at 375.949 kb on + strand at 375.949 kb on + strand at 376.002 kb on + strand at 376.012 kb on + strand at 376.012 kb on + strand at 376.013 kb on - strand at 376.013 kb on - strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.098 kb on + strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.099 kb on - strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.160 kb on + strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.161 kb on - strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.187 kb on + strand at 376.188 kb on - strand at 376.188 kb on - strand at 376.188 kb on - strand at 376.188 kb on - strand at 376.361 kb on + strand, within MPMX19_06186 at 376.361 kb on + strand, within MPMX19_06186 at 376.361 kb on + strand, within MPMX19_06186 at 376.361 kb on + strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.362 kb on - strand, within MPMX19_06186 at 376.677 kb on + strand, within MPMX19_06186 at 376.677 kb on + strand, within MPMX19_06186 at 376.677 kb on + strand, within MPMX19_06186 at 376.677 kb on + strand, within MPMX19_06186 at 376.678 kb on - strand, within MPMX19_06186 at 376.678 kb on - strand, within MPMX19_06186 at 376.678 kb on - strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.697 kb on + strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 376.698 kb on - strand, within MPMX19_06186 at 377.321 kb on + strand, within MPMX19_06187 at 377.321 kb on + strand, within MPMX19_06187 at 377.322 kb on - strand, within MPMX19_06187 at 377.322 kb on - strand, within MPMX19_06187 at 377.384 kb on + strand, within MPMX19_06187 at 377.384 kb on + strand, within MPMX19_06187 at 377.384 kb on + strand, within MPMX19_06187 at 377.384 kb on + strand, within MPMX19_06187 at 377.385 kb on - strand, within MPMX19_06187 at 377.501 kb on + strand, within MPMX19_06187 at 377.501 kb on + strand, within MPMX19_06187 at 377.501 kb on + strand, within MPMX19_06187 at 377.501 kb on + strand, within MPMX19_06187 at 377.501 kb on + strand, within MPMX19_06187 at 377.502 kb on - strand, within MPMX19_06187 at 377.531 kb on + strand, within MPMX19_06187 at 377.531 kb on + strand, within MPMX19_06187 at 377.531 kb on + strand, within MPMX19_06187 at 377.532 kb on - strand, within MPMX19_06187 at 377.532 kb on - strand, within MPMX19_06187 at 377.532 kb on - strand, within MPMX19_06187 at 377.532 kb on - strand, within MPMX19_06187 at 377.532 kb on - strand, within MPMX19_06187 at 377.714 kb on + strand, within MPMX19_06187 at 377.715 kb on - strand, within MPMX19_06187 at 377.715 kb on - strand, within MPMX19_06187 at 377.927 kb on + strand at 377.927 kb on + strand at 377.927 kb on + strand at 377.927 kb on + strand at 377.927 kb on + strand at 377.927 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 375,637 - +0.6 375,666 + -0.1 375,666 + -0.3 375,666 + -0.7 375,666 + -1.7 375,667 - +0.1 375,667 - +0.9 375,667 - +0.9 375,667 - -0.8 375,667 - +1.0 375,949 + -0.4 375,949 + +0.6 376,002 + +0.4 376,012 + +0.2 376,012 + -1.1 376,013 - +2.4 376,013 - -1.7 376,098 + +0.9 376,098 + -1.0 376,098 + +0.6 376,098 + +0.9 376,098 + -0.4 376,098 + -0.9 376,098 + -1.2 376,099 - -0.4 376,099 - -0.7 376,099 - +0.8 376,099 - -0.5 376,099 - -1.0 376,099 - -0.1 376,160 + -0.3 376,160 + +0.9 376,160 + -0.7 376,160 + -1.7 376,160 + -1.1 376,160 + +0.1 376,160 + +0.4 376,160 + -0.8 376,160 + +0.6 376,160 + -0.2 376,160 + +0.9 376,160 + -0.4 376,160 + +0.6 376,160 + -1.0 376,160 + -0.0 376,160 + -0.4 376,160 + -0.1 376,160 + +0.8 376,160 + -0.0 376,160 + -0.4 376,160 + +0.3 376,160 + +0.2 376,160 + +0.6 376,160 + +0.3 376,160 + +0.3 376,161 - +1.4 376,161 - -0.3 376,161 - +0.4 376,161 - +0.1 376,161 - -0.1 376,161 - -0.7 376,161 - -0.6 376,161 - -1.7 376,161 - +0.9 376,161 - +0.3 376,161 - -0.0 376,161 - +0.6 376,161 - -0.4 376,161 - -0.6 376,161 - -1.7 376,161 - +0.6 376,161 - -0.7 376,161 - +0.5 376,161 - +0.2 376,161 - -1.2 376,161 - -0.7 376,161 - -0.3 376,161 - -1.0 376,161 - -1.4 376,161 - -1.1 376,161 - +0.6 376,187 + +0.0 376,187 + +0.2 376,187 + +0.8 376,187 + +1.6 376,187 + +0.8 376,188 - +0.9 376,188 - -1.1 376,188 - -0.3 376,188 - +0.0 376,361 + MPMX19_06186 0.22 +0.6 376,361 + MPMX19_06186 0.22 -1.2 376,361 + MPMX19_06186 0.22 +0.6 376,361 + MPMX19_06186 0.22 +0.6 376,362 - MPMX19_06186 0.22 +1.1 376,362 - MPMX19_06186 0.22 +0.6 376,362 - MPMX19_06186 0.22 +0.3 376,362 - MPMX19_06186 0.22 +0.2 376,362 - MPMX19_06186 0.22 +0.3 376,677 + MPMX19_06186 0.51 -0.6 376,677 + MPMX19_06186 0.51 +0.6 376,677 + MPMX19_06186 0.51 +0.6 376,677 + MPMX19_06186 0.51 +0.4 376,678 - MPMX19_06186 0.52 -2.0 376,678 - MPMX19_06186 0.52 +0.5 376,678 - MPMX19_06186 0.52 -0.6 376,697 + MPMX19_06186 0.53 +0.0 376,697 + MPMX19_06186 0.53 -0.4 376,697 + MPMX19_06186 0.53 +0.5 376,697 + MPMX19_06186 0.53 +0.0 376,697 + MPMX19_06186 0.53 +0.4 376,697 + MPMX19_06186 0.53 -1.1 376,697 + MPMX19_06186 0.53 +0.7 376,697 + MPMX19_06186 0.53 -0.1 376,697 + MPMX19_06186 0.53 +0.6 376,697 + MPMX19_06186 0.53 +0.2 376,697 + MPMX19_06186 0.53 +0.3 376,697 + MPMX19_06186 0.53 +1.4 376,697 + MPMX19_06186 0.53 -0.4 376,698 - MPMX19_06186 0.53 -0.4 376,698 - MPMX19_06186 0.53 +0.9 376,698 - MPMX19_06186 0.53 +0.5 376,698 - MPMX19_06186 0.53 +0.3 376,698 - MPMX19_06186 0.53 -0.2 376,698 - MPMX19_06186 0.53 +1.0 376,698 - MPMX19_06186 0.53 +0.2 376,698 - MPMX19_06186 0.53 -0.4 376,698 - MPMX19_06186 0.53 -0.5 376,698 - MPMX19_06186 0.53 +0.4 376,698 - MPMX19_06186 0.53 -0.8 376,698 - MPMX19_06186 0.53 -1.7 376,698 - MPMX19_06186 0.53 -0.1 376,698 - MPMX19_06186 0.53 +0.4 376,698 - MPMX19_06186 0.53 -0.4 377,321 + MPMX19_06187 0.15 -0.4 377,321 + MPMX19_06187 0.15 +0.5 377,322 - MPMX19_06187 0.15 +0.6 377,322 - MPMX19_06187 0.15 -0.1 377,384 + MPMX19_06187 0.23 +0.3 377,384 + MPMX19_06187 0.23 +0.0 377,384 + MPMX19_06187 0.23 -0.2 377,384 + MPMX19_06187 0.23 -0.7 377,385 - MPMX19_06187 0.23 +0.0 377,501 + MPMX19_06187 0.38 +0.1 377,501 + MPMX19_06187 0.38 +1.4 377,501 + MPMX19_06187 0.38 +0.2 377,501 + MPMX19_06187 0.38 +0.6 377,501 + MPMX19_06187 0.38 -1.0 377,502 - MPMX19_06187 0.38 +0.0 377,531 + MPMX19_06187 0.42 +1.8 377,531 + MPMX19_06187 0.42 -2.6 377,531 + MPMX19_06187 0.42 -0.1 377,532 - MPMX19_06187 0.42 -0.4 377,532 - MPMX19_06187 0.42 -0.6 377,532 - MPMX19_06187 0.42 +0.1 377,532 - MPMX19_06187 0.42 +0.0 377,532 - MPMX19_06187 0.42 +1.9 377,714 + MPMX19_06187 0.66 +0.2 377,715 - MPMX19_06187 0.66 -1.3 377,715 - MPMX19_06187 0.66 -0.3 377,927 + -1.7 377,927 + -0.7 377,927 + -1.1 377,927 + +1.3 377,927 + +1.2 377,927 + -0.2
Or see this region's nucleotide sequence