Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03148 and MPMX19_03149 are separated by 41 nucleotides MPMX19_03149 and MPMX19_03150 overlap by 4 nucleotides MPMX19_03150 and MPMX19_03151 overlap by 4 nucleotides
MPMX19_03148: MPMX19_03148 - hypothetical protein, at 441,114 to 442,661
_03148
MPMX19_03149: MPMX19_03149 - hypothetical protein, at 442,703 to 443,422
_03149
MPMX19_03150: MPMX19_03150 - hypothetical protein, at 443,419 to 444,855
_03150
MPMX19_03151: MPMX19_03151 - hypothetical protein, at 444,852 to 446,009
_03151
Position (kb) 443
444
445 Strain fitness (log2 ratio) -2
-1
0
1
2 at 442.452 kb on + strand, within MPMX19_03148 at 442.452 kb on + strand, within MPMX19_03148 at 442.452 kb on + strand, within MPMX19_03148 at 442.452 kb on + strand, within MPMX19_03148 at 442.452 kb on + strand, within MPMX19_03148 at 442.452 kb on + strand, within MPMX19_03148 at 442.453 kb on - strand, within MPMX19_03148 at 442.453 kb on - strand, within MPMX19_03148 at 442.453 kb on - strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.464 kb on + strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.465 kb on - strand, within MPMX19_03148 at 442.474 kb on - strand, within MPMX19_03148 at 442.492 kb on - strand, within MPMX19_03148 at 442.497 kb on + strand, within MPMX19_03148 at 442.497 kb on + strand, within MPMX19_03148 at 442.497 kb on + strand, within MPMX19_03148 at 442.498 kb on - strand, within MPMX19_03148 at 442.498 kb on - strand, within MPMX19_03148 at 442.498 kb on - strand, within MPMX19_03148 at 442.656 kb on + strand at 442.656 kb on + strand at 442.656 kb on + strand at 442.657 kb on - strand at 442.678 kb on + strand at 442.678 kb on + strand at 442.678 kb on + strand at 442.679 kb on - strand at 442.679 kb on - strand at 442.679 kb on - strand at 442.679 kb on - strand at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.949 kb on + strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 442.950 kb on - strand, within MPMX19_03149 at 443.135 kb on + strand, within MPMX19_03149 at 443.135 kb on + strand, within MPMX19_03149 at 443.135 kb on + strand, within MPMX19_03149 at 443.136 kb on - strand, within MPMX19_03149 at 443.136 kb on - strand, within MPMX19_03149 at 443.136 kb on - strand, within MPMX19_03149 at 443.136 kb on - strand, within MPMX19_03149 at 443.136 kb on - strand, within MPMX19_03149 at 443.141 kb on + strand, within MPMX19_03149 at 443.396 kb on + strand at 443.396 kb on + strand at 443.396 kb on + strand at 443.396 kb on + strand at 443.397 kb on - strand at 443.397 kb on - strand at 443.397 kb on - strand at 443.397 kb on - strand at 443.397 kb on - strand at 443.397 kb on - strand at 443.397 kb on - strand at 443.397 kb on - strand at 443.639 kb on - strand, within MPMX19_03150 at 443.731 kb on + strand, within MPMX19_03150 at 443.731 kb on + strand, within MPMX19_03150 at 443.731 kb on + strand, within MPMX19_03150 at 443.732 kb on - strand, within MPMX19_03150 at 443.732 kb on - strand, within MPMX19_03150 at 443.732 kb on - strand, within MPMX19_03150 at 443.732 kb on - strand, within MPMX19_03150 at 443.732 kb on - strand, within MPMX19_03150 at 443.732 kb on - strand, within MPMX19_03150 at 443.887 kb on + strand, within MPMX19_03150 at 443.887 kb on + strand, within MPMX19_03150 at 443.888 kb on - strand, within MPMX19_03150 at 443.962 kb on + strand, within MPMX19_03150 at 443.962 kb on + strand, within MPMX19_03150 at 443.962 kb on + strand, within MPMX19_03150 at 443.963 kb on - strand, within MPMX19_03150 at 443.963 kb on - strand, within MPMX19_03150 at 443.963 kb on - strand, within MPMX19_03150 at 443.963 kb on - strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.130 kb on + strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.131 kb on - strand, within MPMX19_03150 at 444.398 kb on - strand, within MPMX19_03150 at 444.442 kb on + strand, within MPMX19_03150 at 444.442 kb on + strand, within MPMX19_03150 at 444.442 kb on + strand, within MPMX19_03150 at 444.442 kb on + strand, within MPMX19_03150 at 444.442 kb on + strand, within MPMX19_03150 at 444.443 kb on - strand, within MPMX19_03150 at 444.443 kb on - strand, within MPMX19_03150 at 444.443 kb on - strand, within MPMX19_03150 at 444.443 kb on - strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.454 kb on + strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 444.455 kb on - strand, within MPMX19_03150 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.233 kb on + strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.234 kb on - strand, within MPMX19_03151 at 445.281 kb on + strand, within MPMX19_03151 at 445.281 kb on + strand, within MPMX19_03151 at 445.281 kb on + strand, within MPMX19_03151 at 445.281 kb on + strand, within MPMX19_03151 at 445.281 kb on + strand, within MPMX19_03151 at 445.281 kb on + strand, within MPMX19_03151 at 445.282 kb on - strand, within MPMX19_03151 at 445.282 kb on - strand, within MPMX19_03151 at 445.282 kb on - strand, within MPMX19_03151 at 445.282 kb on - strand, within MPMX19_03151 at 445.282 kb on - strand, within MPMX19_03151 at 445.282 kb on - strand, within MPMX19_03151 at 445.282 kb on - strand, within MPMX19_03151 at 445.599 kb on + strand, within MPMX19_03151 at 445.599 kb on + strand, within MPMX19_03151 at 445.599 kb on + strand, within MPMX19_03151 at 445.599 kb on + strand, within MPMX19_03151 at 445.600 kb on - strand, within MPMX19_03151 at 445.600 kb on - strand, within MPMX19_03151 at 445.600 kb on - strand, within MPMX19_03151 at 445.815 kb on + strand, within MPMX19_03151 at 445.816 kb on - strand, within MPMX19_03151 at 445.816 kb on - strand, within MPMX19_03151 at 445.816 kb on - strand, within MPMX19_03151
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 442,452 + MPMX19_03148 0.86 -1.0 442,452 + MPMX19_03148 0.86 -0.7 442,452 + MPMX19_03148 0.86 +0.0 442,452 + MPMX19_03148 0.86 +0.2 442,452 + MPMX19_03148 0.86 +1.0 442,452 + MPMX19_03148 0.86 -0.1 442,453 - MPMX19_03148 0.86 -1.0 442,453 - MPMX19_03148 0.86 -1.3 442,453 - MPMX19_03148 0.86 +1.7 442,464 + MPMX19_03148 0.87 +0.1 442,464 + MPMX19_03148 0.87 +2.2 442,464 + MPMX19_03148 0.87 -1.0 442,464 + MPMX19_03148 0.87 -1.4 442,464 + MPMX19_03148 0.87 +0.2 442,464 + MPMX19_03148 0.87 -0.1 442,464 + MPMX19_03148 0.87 -2.0 442,464 + MPMX19_03148 0.87 -0.4 442,464 + MPMX19_03148 0.87 +1.0 442,464 + MPMX19_03148 0.87 +0.5 442,464 + MPMX19_03148 0.87 +0.2 442,464 + MPMX19_03148 0.87 -0.2 442,465 - MPMX19_03148 0.87 -0.7 442,465 - MPMX19_03148 0.87 +0.0 442,465 - MPMX19_03148 0.87 -0.3 442,465 - MPMX19_03148 0.87 -0.1 442,465 - MPMX19_03148 0.87 -0.7 442,465 - MPMX19_03148 0.87 -0.7 442,465 - MPMX19_03148 0.87 +0.2 442,465 - MPMX19_03148 0.87 +0.0 442,465 - MPMX19_03148 0.87 +0.3 442,465 - MPMX19_03148 0.87 +0.3 442,465 - MPMX19_03148 0.87 -0.1 442,465 - MPMX19_03148 0.87 -1.5 442,465 - MPMX19_03148 0.87 +0.6 442,465 - MPMX19_03148 0.87 +0.1 442,465 - MPMX19_03148 0.87 +0.6 442,465 - MPMX19_03148 0.87 +0.2 442,465 - MPMX19_03148 0.87 -0.6 442,474 - MPMX19_03148 0.88 -0.6 442,492 - MPMX19_03148 0.89 +1.0 442,497 + MPMX19_03148 0.89 -0.4 442,497 + MPMX19_03148 0.89 -1.4 442,497 + MPMX19_03148 0.89 +0.0 442,498 - MPMX19_03148 0.89 -0.1 442,498 - MPMX19_03148 0.89 +0.0 442,498 - MPMX19_03148 0.89 -2.3 442,656 + -0.7 442,656 + +0.6 442,656 + -1.2 442,657 - +0.3 442,678 + +0.6 442,678 + -1.3 442,678 + -0.8 442,679 - -0.7 442,679 - +0.0 442,679 - -1.4 442,679 - +1.6 442,949 + MPMX19_03149 0.34 -0.1 442,949 + MPMX19_03149 0.34 -0.2 442,949 + MPMX19_03149 0.34 +0.3 442,949 + MPMX19_03149 0.34 -1.4 442,949 + MPMX19_03149 0.34 +0.1 442,949 + MPMX19_03149 0.34 +0.6 442,949 + MPMX19_03149 0.34 -0.4 442,949 + MPMX19_03149 0.34 +1.6 442,949 + MPMX19_03149 0.34 +0.6 442,949 + MPMX19_03149 0.34 +0.6 442,949 + MPMX19_03149 0.34 +0.6 442,949 + MPMX19_03149 0.34 +0.6 442,950 - MPMX19_03149 0.34 +0.4 442,950 - MPMX19_03149 0.34 +0.6 442,950 - MPMX19_03149 0.34 +0.3 442,950 - MPMX19_03149 0.34 +0.4 442,950 - MPMX19_03149 0.34 +1.1 442,950 - MPMX19_03149 0.34 +0.9 442,950 - MPMX19_03149 0.34 -0.1 442,950 - MPMX19_03149 0.34 -1.0 442,950 - MPMX19_03149 0.34 -0.5 442,950 - MPMX19_03149 0.34 -0.1 442,950 - MPMX19_03149 0.34 +1.3 443,135 + MPMX19_03149 0.60 +0.6 443,135 + MPMX19_03149 0.60 +1.3 443,135 + MPMX19_03149 0.60 -0.7 443,136 - MPMX19_03149 0.60 -0.8 443,136 - MPMX19_03149 0.60 -0.0 443,136 - MPMX19_03149 0.60 -0.6 443,136 - MPMX19_03149 0.60 -0.5 443,136 - MPMX19_03149 0.60 -1.1 443,141 + MPMX19_03149 0.61 -0.6 443,396 + -0.2 443,396 + -0.7 443,396 + +0.6 443,396 + -0.1 443,397 - -1.4 443,397 - -0.4 443,397 - -0.7 443,397 - +0.2 443,397 - -1.4 443,397 - +0.2 443,397 - +0.6 443,397 - +1.2 443,639 - MPMX19_03150 0.15 -1.0 443,731 + MPMX19_03150 0.22 +0.3 443,731 + MPMX19_03150 0.22 -1.4 443,731 + MPMX19_03150 0.22 +0.9 443,732 - MPMX19_03150 0.22 -1.9 443,732 - MPMX19_03150 0.22 -0.4 443,732 - MPMX19_03150 0.22 +0.4 443,732 - MPMX19_03150 0.22 +0.2 443,732 - MPMX19_03150 0.22 -1.0 443,732 - MPMX19_03150 0.22 -1.7 443,887 + MPMX19_03150 0.33 +0.5 443,887 + MPMX19_03150 0.33 +1.2 443,888 - MPMX19_03150 0.33 +1.6 443,962 + MPMX19_03150 0.38 -0.4 443,962 + MPMX19_03150 0.38 -0.3 443,962 + MPMX19_03150 0.38 +0.2 443,963 - MPMX19_03150 0.38 -1.0 443,963 - MPMX19_03150 0.38 -0.7 443,963 - MPMX19_03150 0.38 -0.5 443,963 - MPMX19_03150 0.38 -0.1 444,130 + MPMX19_03150 0.49 -0.4 444,130 + MPMX19_03150 0.49 +1.0 444,130 + MPMX19_03150 0.49 +0.8 444,130 + MPMX19_03150 0.49 -1.0 444,130 + MPMX19_03150 0.49 +1.7 444,130 + MPMX19_03150 0.49 -1.2 444,130 + MPMX19_03150 0.49 +0.6 444,130 + MPMX19_03150 0.49 -0.3 444,130 + MPMX19_03150 0.49 +0.2 444,131 - MPMX19_03150 0.50 -0.2 444,131 - MPMX19_03150 0.50 -0.9 444,131 - MPMX19_03150 0.50 -0.1 444,131 - MPMX19_03150 0.50 +0.3 444,131 - MPMX19_03150 0.50 +2.2 444,131 - MPMX19_03150 0.50 +0.3 444,131 - MPMX19_03150 0.50 +1.0 444,131 - MPMX19_03150 0.50 +1.6 444,131 - MPMX19_03150 0.50 -1.4 444,131 - MPMX19_03150 0.50 +0.6 444,131 - MPMX19_03150 0.50 -0.9 444,131 - MPMX19_03150 0.50 +0.4 444,131 - MPMX19_03150 0.50 +0.0 444,398 - MPMX19_03150 0.68 -1.6 444,442 + MPMX19_03150 0.71 -0.4 444,442 + MPMX19_03150 0.71 -1.0 444,442 + MPMX19_03150 0.71 -0.3 444,442 + MPMX19_03150 0.71 +0.6 444,442 + MPMX19_03150 0.71 +0.0 444,443 - MPMX19_03150 0.71 +0.6 444,443 - MPMX19_03150 0.71 -0.4 444,443 - MPMX19_03150 0.71 +0.5 444,443 - MPMX19_03150 0.71 +0.9 444,454 + MPMX19_03150 0.72 -1.4 444,454 + MPMX19_03150 0.72 +1.4 444,454 + MPMX19_03150 0.72 +0.2 444,454 + MPMX19_03150 0.72 -0.1 444,454 + MPMX19_03150 0.72 +0.1 444,454 + MPMX19_03150 0.72 -0.8 444,454 + MPMX19_03150 0.72 -0.4 444,454 + MPMX19_03150 0.72 -0.1 444,454 + MPMX19_03150 0.72 -0.4 444,454 + MPMX19_03150 0.72 +1.6 444,454 + MPMX19_03150 0.72 +0.3 444,454 + MPMX19_03150 0.72 -0.1 444,454 + MPMX19_03150 0.72 -1.7 444,455 - MPMX19_03150 0.72 -0.7 444,455 - MPMX19_03150 0.72 +0.3 444,455 - MPMX19_03150 0.72 +0.6 444,455 - MPMX19_03150 0.72 -0.7 444,455 - MPMX19_03150 0.72 +0.3 444,455 - MPMX19_03150 0.72 +0.1 444,455 - MPMX19_03150 0.72 -0.1 444,455 - MPMX19_03150 0.72 +0.6 444,455 - MPMX19_03150 0.72 -0.1 444,455 - MPMX19_03150 0.72 -2.6 444,455 - MPMX19_03150 0.72 -0.2 444,455 - MPMX19_03150 0.72 +0.0 445,233 + MPMX19_03151 0.33 -1.0 445,233 + MPMX19_03151 0.33 -0.1 445,233 + MPMX19_03151 0.33 +0.3 445,233 + MPMX19_03151 0.33 +0.2 445,233 + MPMX19_03151 0.33 +0.4 445,233 + MPMX19_03151 0.33 +0.3 445,233 + MPMX19_03151 0.33 -0.2 445,233 + MPMX19_03151 0.33 +0.8 445,233 + MPMX19_03151 0.33 -0.5 445,234 - MPMX19_03151 0.33 +0.2 445,234 - MPMX19_03151 0.33 +0.1 445,234 - MPMX19_03151 0.33 +0.3 445,234 - MPMX19_03151 0.33 +0.2 445,234 - MPMX19_03151 0.33 +0.0 445,234 - MPMX19_03151 0.33 +0.6 445,234 - MPMX19_03151 0.33 +0.4 445,234 - MPMX19_03151 0.33 -1.4 445,281 + MPMX19_03151 0.37 +0.3 445,281 + MPMX19_03151 0.37 +0.6 445,281 + MPMX19_03151 0.37 +0.0 445,281 + MPMX19_03151 0.37 -1.6 445,281 + MPMX19_03151 0.37 +0.4 445,281 + MPMX19_03151 0.37 -0.6 445,282 - MPMX19_03151 0.37 -0.9 445,282 - MPMX19_03151 0.37 -0.4 445,282 - MPMX19_03151 0.37 +0.2 445,282 - MPMX19_03151 0.37 -0.1 445,282 - MPMX19_03151 0.37 -2.4 445,282 - MPMX19_03151 0.37 -2.4 445,282 - MPMX19_03151 0.37 -2.2 445,599 + MPMX19_03151 0.65 +0.8 445,599 + MPMX19_03151 0.65 -0.7 445,599 + MPMX19_03151 0.65 -1.2 445,599 + MPMX19_03151 0.65 -1.4 445,600 - MPMX19_03151 0.65 -0.7 445,600 - MPMX19_03151 0.65 +0.7 445,600 - MPMX19_03151 0.65 -0.1 445,815 + MPMX19_03151 0.83 -0.2 445,816 - MPMX19_03151 0.83 +0.3 445,816 - MPMX19_03151 0.83 -1.0 445,816 - MPMX19_03151 0.83 +0.5
Or see this region's nucleotide sequence