Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02828 and MPMX19_02829 are separated by 0 nucleotides MPMX19_02829 and MPMX19_02830 are separated by 52 nucleotides
MPMX19_02828: MPMX19_02828 - Glutathione import ATP-binding protein GsiA, at 69,143 to 70,789
_02828
MPMX19_02829: MPMX19_02829 - 2-dehydropantoate 2-reductase, at 70,790 to 71,770
_02829
MPMX19_02830: MPMX19_02830 - N-carbamoyl-L-amino-acid hydrolase, at 71,823 to 73,064
_02830
Position (kb) 70
71
72 Strain fitness (log2 ratio) -2
-1
0
1 at 69.854 kb on + strand, within MPMX19_02828 at 69.854 kb on + strand, within MPMX19_02828 at 69.854 kb on + strand, within MPMX19_02828 at 69.896 kb on + strand, within MPMX19_02828 at 69.896 kb on + strand, within MPMX19_02828 at 69.896 kb on + strand, within MPMX19_02828 at 69.897 kb on - strand, within MPMX19_02828 at 69.897 kb on - strand, within MPMX19_02828 at 69.897 kb on - strand, within MPMX19_02828 at 69.897 kb on - strand, within MPMX19_02828 at 69.897 kb on - strand, within MPMX19_02828 at 69.899 kb on - strand, within MPMX19_02828 at 69.929 kb on + strand, within MPMX19_02828 at 69.929 kb on + strand, within MPMX19_02828 at 69.929 kb on + strand, within MPMX19_02828 at 69.930 kb on - strand, within MPMX19_02828 at 69.930 kb on - strand, within MPMX19_02828 at 69.930 kb on - strand, within MPMX19_02828 at 69.930 kb on - strand, within MPMX19_02828 at 70.262 kb on + strand, within MPMX19_02828 at 70.262 kb on + strand, within MPMX19_02828 at 70.263 kb on - strand, within MPMX19_02828 at 70.703 kb on + strand at 70.703 kb on + strand at 70.703 kb on + strand at 70.703 kb on + strand at 70.704 kb on - strand at 70.704 kb on - strand at 71.085 kb on + strand, within MPMX19_02829 at 71.086 kb on - strand, within MPMX19_02829 at 71.095 kb on + strand, within MPMX19_02829 at 71.314 kb on + strand, within MPMX19_02829 at 71.314 kb on + strand, within MPMX19_02829 at 71.314 kb on + strand, within MPMX19_02829 at 71.314 kb on + strand, within MPMX19_02829 at 71.624 kb on + strand, within MPMX19_02829 at 71.624 kb on + strand, within MPMX19_02829 at 71.624 kb on + strand, within MPMX19_02829 at 71.624 kb on + strand, within MPMX19_02829 at 71.624 kb on + strand, within MPMX19_02829 at 71.624 kb on + strand, within MPMX19_02829 at 71.624 kb on + strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.625 kb on - strand, within MPMX19_02829 at 71.739 kb on + strand at 71.740 kb on - strand at 72.346 kb on - strand, within MPMX19_02830 at 72.384 kb on + strand, within MPMX19_02830 at 72.384 kb on + strand, within MPMX19_02830 at 72.384 kb on + strand, within MPMX19_02830 at 72.385 kb on - strand, within MPMX19_02830 at 72.385 kb on - strand, within MPMX19_02830 at 72.474 kb on + strand, within MPMX19_02830 at 72.475 kb on - strand, within MPMX19_02830
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 69,854 + MPMX19_02828 0.43 -1.2 69,854 + MPMX19_02828 0.43 -0.6 69,854 + MPMX19_02828 0.43 -1.4 69,896 + MPMX19_02828 0.46 -2.2 69,896 + MPMX19_02828 0.46 -2.0 69,896 + MPMX19_02828 0.46 -0.6 69,897 - MPMX19_02828 0.46 -0.7 69,897 - MPMX19_02828 0.46 +1.2 69,897 - MPMX19_02828 0.46 -1.7 69,897 - MPMX19_02828 0.46 +1.4 69,897 - MPMX19_02828 0.46 -0.2 69,899 - MPMX19_02828 0.46 +0.9 69,929 + MPMX19_02828 0.48 -1.4 69,929 + MPMX19_02828 0.48 +1.6 69,929 + MPMX19_02828 0.48 -0.8 69,930 - MPMX19_02828 0.48 +0.9 69,930 - MPMX19_02828 0.48 +0.6 69,930 - MPMX19_02828 0.48 +0.3 69,930 - MPMX19_02828 0.48 -1.0 70,262 + MPMX19_02828 0.68 +0.0 70,262 + MPMX19_02828 0.68 +0.2 70,263 - MPMX19_02828 0.68 -1.4 70,703 + +0.6 70,703 + -1.0 70,703 + -0.9 70,703 + +0.6 70,704 - -0.3 70,704 - -0.5 71,085 + MPMX19_02829 0.30 +0.2 71,086 - MPMX19_02829 0.30 +0.2 71,095 + MPMX19_02829 0.31 +1.0 71,314 + MPMX19_02829 0.53 +1.0 71,314 + MPMX19_02829 0.53 -1.0 71,314 + MPMX19_02829 0.53 +0.6 71,314 + MPMX19_02829 0.53 +0.6 71,624 + MPMX19_02829 0.85 +1.7 71,624 + MPMX19_02829 0.85 -0.7 71,624 + MPMX19_02829 0.85 -0.0 71,624 + MPMX19_02829 0.85 +0.2 71,624 + MPMX19_02829 0.85 +1.2 71,624 + MPMX19_02829 0.85 -0.4 71,624 + MPMX19_02829 0.85 -0.3 71,625 - MPMX19_02829 0.85 +1.1 71,625 - MPMX19_02829 0.85 -1.0 71,625 - MPMX19_02829 0.85 -1.0 71,625 - MPMX19_02829 0.85 +0.6 71,625 - MPMX19_02829 0.85 -1.4 71,625 - MPMX19_02829 0.85 +0.9 71,625 - MPMX19_02829 0.85 +0.1 71,625 - MPMX19_02829 0.85 -0.9 71,739 + -1.4 71,740 - +0.6 72,346 - MPMX19_02830 0.42 +0.6 72,384 + MPMX19_02830 0.45 -1.6 72,384 + MPMX19_02830 0.45 -1.4 72,384 + MPMX19_02830 0.45 +1.2 72,385 - MPMX19_02830 0.45 +1.1 72,385 - MPMX19_02830 0.45 +0.3 72,474 + MPMX19_02830 0.52 +0.6 72,475 - MPMX19_02830 0.52 -1.0
Or see this region's nucleotide sequence