Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00342 and MPMX19_00343 are separated by 547 nucleotides MPMX19_00343 and MPMX19_00344 are separated by 141 nucleotides MPMX19_00344 and MPMX19_00345 are separated by 25 nucleotides MPMX19_00345 and MPMX19_00346 are separated by 99 nucleotides
MPMX19_00342: MPMX19_00342 - Peptidoglycan O-acetyltransferase, at 349,885 to 351,321
_00342
MPMX19_00343: MPMX19_00343 - Peptide chain release factor RF2, at 351,869 to 352,837
_00343
MPMX19_00344: MPMX19_00344 - hypothetical protein, at 352,979 to 353,305
_00344
MPMX19_00345: MPMX19_00345 - hypothetical protein, at 353,331 to 353,567
_00345
MPMX19_00346: MPMX19_00346 - Trehalose-phosphate phosphatase, at 353,667 to 354,467
_00346
Position (kb) 351
352
353 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 350.900 kb on + strand, within MPMX19_00342 at 350.900 kb on + strand, within MPMX19_00342 at 350.900 kb on + strand, within MPMX19_00342 at 350.900 kb on + strand, within MPMX19_00342 at 350.900 kb on + strand, within MPMX19_00342 at 350.900 kb on + strand, within MPMX19_00342 at 350.900 kb on + strand, within MPMX19_00342 at 350.900 kb on + strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.901 kb on - strand, within MPMX19_00342 at 350.915 kb on + strand, within MPMX19_00342 at 350.916 kb on - strand, within MPMX19_00342 at 350.916 kb on - strand, within MPMX19_00342 at 350.916 kb on - strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.936 kb on + strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 350.937 kb on - strand, within MPMX19_00342 at 351.039 kb on - strand, within MPMX19_00342 at 351.039 kb on - strand, within MPMX19_00342 at 351.039 kb on - strand, within MPMX19_00342 at 351.039 kb on - strand, within MPMX19_00342 at 351.039 kb on - strand, within MPMX19_00342 at 351.041 kb on + strand, within MPMX19_00342 at 351.041 kb on + strand, within MPMX19_00342 at 351.042 kb on - strand, within MPMX19_00342 at 351.092 kb on + strand, within MPMX19_00342 at 351.092 kb on + strand, within MPMX19_00342 at 351.092 kb on + strand, within MPMX19_00342 at 351.092 kb on + strand, within MPMX19_00342 at 351.092 kb on + strand, within MPMX19_00342 at 351.092 kb on + strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.093 kb on - strand, within MPMX19_00342 at 351.143 kb on + strand, within MPMX19_00342 at 351.143 kb on + strand, within MPMX19_00342 at 351.143 kb on + strand, within MPMX19_00342 at 351.143 kb on + strand, within MPMX19_00342 at 351.143 kb on + strand, within MPMX19_00342 at 351.143 kb on + strand, within MPMX19_00342 at 351.144 kb on - strand, within MPMX19_00342 at 351.144 kb on - strand, within MPMX19_00342 at 351.144 kb on - strand, within MPMX19_00342 at 351.144 kb on - strand, within MPMX19_00342 at 351.144 kb on - strand, within MPMX19_00342 at 351.144 kb on - strand, within MPMX19_00342 at 351.144 kb on - strand, within MPMX19_00342 at 351.198 kb on - strand at 351.203 kb on + strand at 351.203 kb on + strand at 351.203 kb on + strand at 351.203 kb on + strand at 351.203 kb on + strand at 351.203 kb on + strand at 351.203 kb on + strand at 351.204 kb on - strand at 351.204 kb on - strand at 351.204 kb on - strand at 351.204 kb on - strand at 351.204 kb on - strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.210 kb on + strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.211 kb on - strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.212 kb on + strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.213 kb on - strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.441 kb on + strand at 351.442 kb on - strand at 351.442 kb on - strand at 351.442 kb on - strand at 351.442 kb on - strand at 351.442 kb on - strand at 351.442 kb on - strand at 351.442 kb on - strand at 351.476 kb on - strand at 351.502 kb on + strand at 351.502 kb on + strand at 351.502 kb on + strand at 351.502 kb on + strand at 351.502 kb on + strand at 351.502 kb on + strand at 351.502 kb on + strand at 351.503 kb on - strand at 351.503 kb on - strand at 351.503 kb on - strand at 351.503 kb on - strand at 351.539 kb on + strand at 351.539 kb on + strand at 351.540 kb on - strand at 351.540 kb on - strand at 351.540 kb on - strand at 351.655 kb on + strand at 351.655 kb on + strand at 351.655 kb on + strand at 351.655 kb on + strand at 351.655 kb on + strand at 351.655 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.659 kb on + strand at 351.661 kb on + strand at 351.661 kb on + strand at 351.661 kb on + strand at 351.661 kb on + strand at 351.661 kb on + strand at 351.661 kb on + strand at 352.951 kb on + strand at 352.951 kb on + strand at 352.951 kb on + strand at 352.951 kb on + strand at 352.951 kb on + strand at 352.951 kb on + strand at 352.952 kb on - strand at 352.952 kb on - strand at 352.952 kb on - strand at 352.952 kb on - strand at 352.952 kb on - strand at 352.952 kb on - strand at 352.952 kb on - strand at 352.952 kb on - strand at 352.952 kb on - strand at 353.198 kb on + strand, within MPMX19_00344 at 353.199 kb on - strand, within MPMX19_00344 at 353.199 kb on - strand, within MPMX19_00344 at 353.199 kb on - strand, within MPMX19_00344 at 353.199 kb on - strand, within MPMX19_00344 at 353.199 kb on - strand, within MPMX19_00344 at 353.282 kb on + strand at 353.282 kb on + strand at 353.282 kb on + strand at 353.282 kb on + strand at 353.282 kb on + strand at 353.282 kb on + strand at 353.282 kb on + strand at 353.283 kb on - strand at 353.283 kb on - strand at 353.283 kb on - strand at 353.283 kb on - strand at 353.283 kb on - strand at 353.600 kb on + strand at 353.600 kb on + strand at 353.600 kb on + strand at 353.600 kb on + strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.601 kb on - strand at 353.616 kb on + strand at 353.616 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 350,900 + MPMX19_00342 0.71 -0.2 350,900 + MPMX19_00342 0.71 +0.4 350,900 + MPMX19_00342 0.71 +1.2 350,900 + MPMX19_00342 0.71 +0.6 350,900 + MPMX19_00342 0.71 -1.0 350,900 + MPMX19_00342 0.71 -1.6 350,900 + MPMX19_00342 0.71 -0.2 350,900 + MPMX19_00342 0.71 -0.4 350,901 - MPMX19_00342 0.71 -1.3 350,901 - MPMX19_00342 0.71 -0.0 350,901 - MPMX19_00342 0.71 +0.6 350,901 - MPMX19_00342 0.71 +0.2 350,901 - MPMX19_00342 0.71 +1.1 350,901 - MPMX19_00342 0.71 -1.6 350,901 - MPMX19_00342 0.71 +0.3 350,901 - MPMX19_00342 0.71 -0.1 350,915 + MPMX19_00342 0.72 +0.2 350,916 - MPMX19_00342 0.72 +0.8 350,916 - MPMX19_00342 0.72 +1.2 350,916 - MPMX19_00342 0.72 -0.7 350,936 + MPMX19_00342 0.73 -0.4 350,936 + MPMX19_00342 0.73 +0.2 350,936 + MPMX19_00342 0.73 +0.8 350,936 + MPMX19_00342 0.73 -1.0 350,936 + MPMX19_00342 0.73 +1.9 350,936 + MPMX19_00342 0.73 -1.0 350,936 + MPMX19_00342 0.73 +0.7 350,936 + MPMX19_00342 0.73 +0.6 350,936 + MPMX19_00342 0.73 +0.6 350,936 + MPMX19_00342 0.73 -0.0 350,936 + MPMX19_00342 0.73 -0.4 350,937 - MPMX19_00342 0.73 +0.6 350,937 - MPMX19_00342 0.73 +0.4 350,937 - MPMX19_00342 0.73 -0.8 350,937 - MPMX19_00342 0.73 -0.0 350,937 - MPMX19_00342 0.73 -0.3 350,937 - MPMX19_00342 0.73 -0.6 350,937 - MPMX19_00342 0.73 -1.0 350,937 - MPMX19_00342 0.73 -0.8 351,039 - MPMX19_00342 0.80 -1.3 351,039 - MPMX19_00342 0.80 +0.9 351,039 - MPMX19_00342 0.80 -0.4 351,039 - MPMX19_00342 0.80 +0.6 351,039 - MPMX19_00342 0.80 -0.2 351,041 + MPMX19_00342 0.80 -1.5 351,041 + MPMX19_00342 0.80 +1.3 351,042 - MPMX19_00342 0.81 -0.1 351,092 + MPMX19_00342 0.84 -0.0 351,092 + MPMX19_00342 0.84 -0.2 351,092 + MPMX19_00342 0.84 +0.6 351,092 + MPMX19_00342 0.84 +0.3 351,092 + MPMX19_00342 0.84 -1.4 351,092 + MPMX19_00342 0.84 -0.2 351,093 - MPMX19_00342 0.84 +1.6 351,093 - MPMX19_00342 0.84 -0.4 351,093 - MPMX19_00342 0.84 -0.6 351,093 - MPMX19_00342 0.84 +0.6 351,093 - MPMX19_00342 0.84 +1.3 351,093 - MPMX19_00342 0.84 +1.1 351,093 - MPMX19_00342 0.84 -1.4 351,093 - MPMX19_00342 0.84 +0.7 351,143 + MPMX19_00342 0.88 +1.2 351,143 + MPMX19_00342 0.88 -0.9 351,143 + MPMX19_00342 0.88 -1.4 351,143 + MPMX19_00342 0.88 +0.2 351,143 + MPMX19_00342 0.88 -2.0 351,143 + MPMX19_00342 0.88 +0.1 351,144 - MPMX19_00342 0.88 +2.4 351,144 - MPMX19_00342 0.88 -1.0 351,144 - MPMX19_00342 0.88 -1.6 351,144 - MPMX19_00342 0.88 +0.3 351,144 - MPMX19_00342 0.88 +0.2 351,144 - MPMX19_00342 0.88 +0.2 351,144 - MPMX19_00342 0.88 -0.2 351,198 - +1.1 351,203 + +0.7 351,203 + -0.2 351,203 + -0.4 351,203 + -0.4 351,203 + +0.6 351,203 + -0.0 351,203 + +0.1 351,204 - -0.2 351,204 - +0.4 351,204 - +1.2 351,204 - +0.6 351,204 - -0.8 351,210 + +0.2 351,210 + +0.2 351,210 + +0.6 351,210 + +0.3 351,210 + -1.2 351,210 + +1.6 351,210 + +0.6 351,210 + -0.2 351,210 + +0.3 351,210 + +0.2 351,210 + -0.0 351,210 + -0.4 351,210 + -0.1 351,210 + +1.1 351,211 - +0.3 351,211 - +0.6 351,211 - -0.4 351,211 - -0.8 351,211 - -1.2 351,211 - -0.2 351,211 - -0.2 351,211 - +0.0 351,211 - -1.0 351,211 - -0.5 351,211 - +0.2 351,211 - -0.4 351,211 - +0.2 351,211 - -1.4 351,211 - -1.0 351,211 - +0.6 351,211 - +0.2 351,211 - -1.4 351,211 - -0.8 351,211 - -1.0 351,211 - -1.4 351,211 - -0.4 351,212 + -0.8 351,212 + +0.4 351,212 + -0.2 351,212 + -1.8 351,212 + -0.7 351,212 + -0.8 351,212 + -1.0 351,212 + -0.7 351,212 + +0.2 351,212 + +0.2 351,212 + +0.3 351,212 + -0.3 351,212 + +0.2 351,212 + -0.5 351,212 + +0.6 351,212 + -1.4 351,212 + -0.5 351,212 + +0.6 351,212 + -0.4 351,212 + -0.3 351,212 + -1.8 351,213 - -0.0 351,213 - +0.1 351,213 - -2.0 351,213 - -0.4 351,213 - -1.8 351,213 - -0.6 351,213 - -0.5 351,213 - -0.8 351,213 - -0.6 351,213 - -0.2 351,213 - -0.1 351,213 - -0.8 351,213 - -1.8 351,213 - +0.2 351,213 - -0.8 351,213 - -1.0 351,213 - +0.2 351,213 - +0.6 351,213 - -0.4 351,213 - -1.4 351,213 - -0.2 351,213 - -0.8 351,441 + -0.1 351,441 + -0.3 351,441 + -0.7 351,441 + +0.6 351,441 + -1.0 351,441 + +0.9 351,441 + -0.2 351,441 + -0.8 351,441 + -0.3 351,441 + -1.0 351,442 - +0.6 351,442 - -0.4 351,442 - +1.2 351,442 - +0.6 351,442 - -0.0 351,442 - +0.6 351,442 - -0.4 351,476 - +0.9 351,502 + +0.3 351,502 + -0.8 351,502 + +0.6 351,502 + -1.0 351,502 + +0.1 351,502 + +0.2 351,502 + +1.3 351,503 - -0.1 351,503 - -0.2 351,503 - -2.6 351,503 - +0.5 351,539 + +0.4 351,539 + +0.2 351,540 - -0.2 351,540 - -0.7 351,540 - -2.6 351,655 + +0.8 351,655 + -1.3 351,655 + -0.3 351,655 + -0.4 351,655 + +1.0 351,655 + -0.8 351,659 + -0.2 351,659 + -2.2 351,659 + -2.2 351,659 + +0.2 351,659 + +0.2 351,659 + +0.6 351,659 + -0.4 351,659 + +0.9 351,659 + +0.1 351,659 + -0.4 351,659 + -0.6 351,659 + -1.7 351,659 + -2.0 351,659 + +0.5 351,659 + +0.3 351,659 + -0.0 351,659 + +0.9 351,659 + +0.6 351,659 + -0.6 351,659 + -0.8 351,659 + +0.6 351,659 + -1.8 351,659 + -0.3 351,659 + -0.4 351,659 + -1.8 351,659 + -1.1 351,659 + -0.2 351,659 + -1.0 351,659 + +0.2 351,659 + +1.0 351,659 + +1.2 351,659 + +0.4 351,659 + +0.2 351,659 + -0.7 351,659 + -0.2 351,659 + -0.1 351,659 + -0.4 351,659 + -0.6 351,659 + -0.2 351,659 + -0.8 351,659 + -0.0 351,659 + -0.8 351,659 + -0.4 351,659 + +0.3 351,659 + -0.4 351,659 + -0.1 351,659 + -0.4 351,661 + +1.1 351,661 + -1.2 351,661 + -1.2 351,661 + -0.6 351,661 + +0.3 351,661 + +0.6 352,951 + -0.1 352,951 + +0.3 352,951 + +0.6 352,951 + +1.1 352,951 + +0.3 352,951 + -1.0 352,952 - -2.1 352,952 - -0.3 352,952 - -3.3 352,952 - +1.7 352,952 - -1.3 352,952 - +1.2 352,952 - +1.0 352,952 - +0.8 352,952 - -1.4 353,198 + MPMX19_00344 0.67 +0.5 353,199 - MPMX19_00344 0.67 -1.2 353,199 - MPMX19_00344 0.67 +0.6 353,199 - MPMX19_00344 0.67 -1.8 353,199 - MPMX19_00344 0.67 -1.6 353,199 - MPMX19_00344 0.67 -2.1 353,282 + -0.7 353,282 + -0.4 353,282 + -0.8 353,282 + +0.3 353,282 + -0.8 353,282 + -0.7 353,282 + +1.2 353,283 - -0.1 353,283 - +0.9 353,283 - -1.2 353,283 - -0.2 353,283 - -0.4 353,600 + +1.2 353,600 + -1.0 353,600 + +0.2 353,600 + -1.1 353,601 - -0.4 353,601 - +1.8 353,601 - +0.4 353,601 - -1.0 353,601 - +0.2 353,601 - -0.3 353,601 - +0.8 353,601 - +0.2 353,601 - -0.0 353,601 - -1.4 353,616 + -1.0 353,616 + -0.4
Or see this region's nucleotide sequence