Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05344

Experiment: NLN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLN
15,362	+		MPMX19_05343	0.11	+0.2
15,362	+		MPMX19_05343	0.11	-0.5
15,363	-		MPMX19_05343	0.11	-0.2
15,363	-		MPMX19_05343	0.11	-1.8
15,363	-		MPMX19_05343	0.11	-1.8
15,545	+		MPMX19_05343	0.29	-0.7
15,545	+		MPMX19_05343	0.29	-1.1
15,545	+		MPMX19_05343	0.29	-0.2
15,546	-		MPMX19_05343	0.29	+0.5
15,546	-		MPMX19_05343	0.29	-2.8
15,546	-		MPMX19_05343	0.29	-1.3
15,935	+		MPMX19_05343	0.68	-1.5
15,935	+		MPMX19_05343	0.68	-0.7
15,935	+		MPMX19_05343	0.68	+0.2
15,935	+		MPMX19_05343	0.68	+0.5
15,935	+		MPMX19_05343	0.68	+0.8
15,936	-		MPMX19_05343	0.68	-0.4
15,936	-		MPMX19_05343	0.68	+0.9
15,936	-		MPMX19_05343	0.68	-0.1
15,936	-		MPMX19_05343	0.68	+0.0
16,106	+		MPMX19_05343	0.85	-0.5
16,106	+		MPMX19_05343	0.85	-1.1
16,106	+		MPMX19_05343	0.85	+0.3
16,106	+		MPMX19_05343	0.85	-1.5
16,106	+		MPMX19_05343	0.85	-0.2
16,106	+		MPMX19_05343	0.85	-1.1
16,106	+		MPMX19_05343	0.85	-1.1
16,106	+		MPMX19_05343	0.85	-1.8
16,106	+		MPMX19_05343	0.85	-1.1
16,106	+		MPMX19_05343	0.85	+0.2
16,106	+		MPMX19_05343	0.85	+0.1
16,107	-		MPMX19_05343	0.85	+0.2
16,107	-		MPMX19_05343	0.85	-0.8
16,107	-		MPMX19_05343	0.85	-0.2
16,107	-		MPMX19_05343	0.85	+0.3
16,107	-		MPMX19_05343	0.85	+0.8
16,107	-		MPMX19_05343	0.85	+1.3
16,107	-		MPMX19_05343	0.85	+2.5
16,107	-		MPMX19_05343	0.85	-2.1
16,107	-		MPMX19_05343	0.85	+0.2
16,107	-		MPMX19_05343	0.85	+0.3
16,107	-		MPMX19_05343	0.85	+0.7
16,107	-		MPMX19_05343	0.85	-0.4
16,107	-		MPMX19_05343	0.85	-0.3
16,107	-		MPMX19_05343	0.85	+2.5
16,107	-		MPMX19_05343	0.85	+0.7
16,107	-		MPMX19_05343	0.85	-0.0
16,107	-		MPMX19_05343	0.85	+0.5
16,107	-		MPMX19_05343	0.85	+0.0
16,213	+				-0.2
16,213	+				-0.7
16,214	-				-1.5
16,223	+				+0.2
16,223	+				-1.5
16,223	+				-0.5
16,223	+				-2.1
16,224	-				-0.3
16,224	-				-0.1
16,224	-				-0.3
16,224	-				-0.6
16,224	-				-1.1
16,528	+		MPMX19_05344	0.27	-0.7
16,528	+		MPMX19_05344	0.27	-0.2
16,528	+		MPMX19_05344	0.27	+0.1
16,528	+		MPMX19_05344	0.27	-0.2
16,528	+		MPMX19_05344	0.27	-1.5
16,528	+		MPMX19_05344	0.27	-0.1
16,528	+		MPMX19_05344	0.27	-0.5
16,529	-		MPMX19_05344	0.27	-0.5
16,529	-		MPMX19_05344	0.27	+0.3
16,529	-		MPMX19_05344	0.27	-0.3
16,529	-		MPMX19_05344	0.27	-0.3
16,529	-		MPMX19_05344	0.27	-0.2
16,744	+		MPMX19_05344	0.50	-0.8
16,745	-		MPMX19_05344	0.51	+0.8
16,951	+		MPMX19_05344	0.73	+0.7
16,951	+		MPMX19_05344	0.73	-0.7
16,951	+		MPMX19_05344	0.73	-1.5
16,951	+		MPMX19_05344	0.73	-0.5
16,951	+		MPMX19_05344	0.73	-0.2
16,951	+		MPMX19_05344	0.73	-0.8
16,951	+		MPMX19_05344	0.73	-0.1
16,951	+		MPMX19_05344	0.73	+0.5
16,952	-		MPMX19_05344	0.73	-0.2
16,952	-		MPMX19_05344	0.73	-0.5
16,952	-		MPMX19_05344	0.73	+0.5
16,952	-		MPMX19_05344	0.73	+0.8
16,952	-		MPMX19_05344	0.73	-0.5
16,952	-		MPMX19_05344	0.73	+0.1
16,952	-		MPMX19_05344	0.73	-0.9
16,952	-		MPMX19_05344	0.73	+0.2
16,952	-		MPMX19_05344	0.73	-1.7
16,952	-		MPMX19_05344	0.73	+0.3
16,952	-		MPMX19_05344	0.73	-1.1
16,952	-		MPMX19_05344	0.73	-1.1
16,952	-		MPMX19_05344	0.73	+1.7
16,952	-		MPMX19_05344	0.73	-0.1
17,102	-		MPMX19_05344	0.89	+0.5
17,102	-		MPMX19_05344	0.89	-0.5
17,102	-		MPMX19_05344	0.89	-2.1
17,256	+				-0.6
17,256	+				-0.6
17,256	+				-0.2
17,257	-				+0.1
17,257	-				+0.8
17,257	-				+0.1
17,257	-				+0.3
17,283	+		MPMX19_05345	0.10	-0.2
17,283	+		MPMX19_05345	0.10	-0.1
17,283	+		MPMX19_05345	0.10	-0.7
17,283	+		MPMX19_05345	0.10	-0.3
17,283	+		MPMX19_05345	0.10	+0.1
17,283	+		MPMX19_05345	0.10	+0.4
17,283	+		MPMX19_05345	0.10	-0.0
17,283	+		MPMX19_05345	0.10	-1.4
17,283	+		MPMX19_05345	0.10	-1.0
17,284	-		MPMX19_05345	0.10	-0.2
17,284	-		MPMX19_05345	0.10	-0.2
17,284	-		MPMX19_05345	0.10	+1.1
17,298	+		MPMX19_05345	0.12	-2.1
17,298	+		MPMX19_05345	0.12	-0.1
17,298	+		MPMX19_05345	0.12	-0.5
17,298	+		MPMX19_05345	0.12	-1.1
17,298	+		MPMX19_05345	0.12	+1.5
17,298	+		MPMX19_05345	0.12	-0.7
17,298	+		MPMX19_05345	0.12	+0.5
17,298	+		MPMX19_05345	0.12	+0.1
17,298	+		MPMX19_05345	0.12	-0.7
17,298	+		MPMX19_05345	0.12	-0.9
17,298	+		MPMX19_05345	0.12	-2.9
17,298	+		MPMX19_05345	0.12	-0.1
17,298	+		MPMX19_05345	0.12	+0.2
17,298	+		MPMX19_05345	0.12	+0.5
17,298	+		MPMX19_05345	0.12	+0.1
17,298	+		MPMX19_05345	0.12	-2.1
17,299	-		MPMX19_05345	0.12	+0.6
17,299	-		MPMX19_05345	0.12	+0.0
17,299	-		MPMX19_05345	0.12	-0.6
17,299	-		MPMX19_05345	0.12	+0.8
17,299	-		MPMX19_05345	0.12	-2.2
17,299	-		MPMX19_05345	0.12	+2.3
17,299	-		MPMX19_05345	0.12	-0.5
17,299	-		MPMX19_05345	0.12	+0.9
17,299	-		MPMX19_05345	0.12	-0.5
17,299	-		MPMX19_05345	0.12	+0.5
17,299	-		MPMX19_05345	0.12	-0.8
17,299	-		MPMX19_05345	0.12	-0.0
17,299	-		MPMX19_05345	0.12	-0.1
17,299	-		MPMX19_05345	0.12	-0.8
17,400	+		MPMX19_05345	0.27	+0.7
17,400	+		MPMX19_05345	0.27	+0.5
17,400	+		MPMX19_05345	0.27	-0.6
17,400	+		MPMX19_05345	0.27	-0.5
17,400	+		MPMX19_05345	0.27	-0.1
17,401	-		MPMX19_05345	0.27	-0.5
17,401	-		MPMX19_05345	0.27	+1.4
17,401	-		MPMX19_05345	0.27	-0.0
17,401	-		MPMX19_05345	0.27	+1.2
17,401	-		MPMX19_05345	0.27	+0.3
17,401	-		MPMX19_05345	0.27	-0.1
17,401	-		MPMX19_05345	0.27	-1.2
17,493	+		MPMX19_05345	0.40	-0.1
17,493	+		MPMX19_05345	0.40	-0.5
17,493	+		MPMX19_05345	0.40	+0.2
17,493	+		MPMX19_05345	0.40	-1.5
17,493	+		MPMX19_05345	0.40	+0.5
17,493	+		MPMX19_05345	0.40	+0.5
17,494	-		MPMX19_05345	0.40	+0.5
17,494	-		MPMX19_05345	0.40	-0.5
17,494	-		MPMX19_05345	0.40	+0.4
17,494	-		MPMX19_05345	0.40	+0.1
17,530	+		MPMX19_05345	0.45	-0.6
17,530	+		MPMX19_05345	0.45	-0.2
17,530	+		MPMX19_05345	0.45	+0.5
17,530	+		MPMX19_05345	0.45	-0.5
17,531	-		MPMX19_05345	0.45	-0.5
17,531	-		MPMX19_05345	0.45	-1.1
17,535	+		MPMX19_05345	0.46	-1.5
17,536	-		MPMX19_05345	0.46	+0.3
17,536	-		MPMX19_05345	0.46	-0.8
17,640	+		MPMX19_05345	0.60	-0.1
17,640	+		MPMX19_05345	0.60	+0.2
17,640	+		MPMX19_05345	0.60	-1.1
17,640	+		MPMX19_05345	0.60	+0.1
17,640	+		MPMX19_05345	0.60	+0.3
17,640	+		MPMX19_05345	0.60	-0.6
17,640	+		MPMX19_05345	0.60	-0.1
17,640	+		MPMX19_05345	0.60	-0.5
17,640	+		MPMX19_05345	0.60	+0.8
17,640	+		MPMX19_05345	0.60	+0.7
17,641	-		MPMX19_05345	0.60	-1.8
17,641	-		MPMX19_05345	0.60	-1.5
17,641	-		MPMX19_05345	0.60	+0.8
17,641	-		MPMX19_05345	0.60	-1.8
17,641	-		MPMX19_05345	0.60	+0.2
17,641	-		MPMX19_05345	0.60	-0.7
17,641	-		MPMX19_05345	0.60	+0.3
17,641	-		MPMX19_05345	0.60	-0.1
17,641	-		MPMX19_05345	0.60	-0.9
17,641	-		MPMX19_05345	0.60	-1.1
17,641	-		MPMX19_05345	0.60	+0.4
17,641	-		MPMX19_05345	0.60	-0.6
17,641	-		MPMX19_05345	0.60	-0.1
17,871	+				-0.8
17,871	+				-0.8
17,871	+				-0.8
17,871	+				-0.3
17,872	-				-1.1
17,872	-				-0.8
17,872	-				-1.1
17,872	-				-1.2
17,913	+				+0.1
17,986	-				+0.5
18,196	+		MPMX19_05346	0.27	+0.6
18,197	-		MPMX19_05346	0.28	-0.7
18,197	-		MPMX19_05346	0.28	-1.3
18,197	-		MPMX19_05346	0.28	-0.1
18,197	-		MPMX19_05346	0.28	+1.5