Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05117 and MPMX19_05118 are separated by 238 nucleotides MPMX19_05118 and MPMX19_05119 are separated by 138 nucleotides
MPMX19_05117: MPMX19_05117 - HTH-type transcriptional regulator HexR, at 602,136 to 603,053
_05117
MPMX19_05118: MPMX19_05118 - Phosphogluconate dehydratase, at 603,292 to 605,130
_05118
MPMX19_05119: MPMX19_05119 - Glucose-6-phosphate 1-dehydrogenase, at 605,269 to 606,789
_05119
Position (kb) 603
604
605
606 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 602.746 kb on + strand, within MPMX19_05117 at 602.746 kb on + strand, within MPMX19_05117 at 602.746 kb on + strand, within MPMX19_05117 at 602.746 kb on + strand, within MPMX19_05117 at 602.746 kb on + strand, within MPMX19_05117 at 602.746 kb on + strand, within MPMX19_05117 at 602.747 kb on - strand, within MPMX19_05117 at 602.747 kb on - strand, within MPMX19_05117 at 602.747 kb on - strand, within MPMX19_05117 at 602.747 kb on - strand, within MPMX19_05117 at 602.747 kb on - strand, within MPMX19_05117 at 602.747 kb on - strand, within MPMX19_05117 at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.003 kb on + strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.004 kb on - strand at 603.005 kb on + strand at 603.005 kb on + strand at 603.006 kb on - strand at 603.006 kb on - strand at 603.006 kb on - strand at 603.017 kb on + strand at 603.017 kb on + strand at 603.017 kb on + strand at 603.018 kb on - strand at 603.018 kb on - strand at 603.058 kb on + strand at 603.058 kb on + strand at 603.058 kb on + strand at 603.058 kb on + strand at 603.059 kb on - strand at 603.059 kb on - strand at 603.059 kb on - strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.064 kb on + strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.065 kb on - strand at 603.151 kb on + strand at 603.151 kb on + strand at 603.152 kb on - strand at 603.152 kb on - strand at 603.152 kb on - strand at 603.152 kb on - strand at 603.203 kb on - strand at 603.203 kb on - strand at 603.203 kb on - strand at 603.203 kb on - strand at 603.241 kb on + strand at 603.241 kb on + strand at 603.241 kb on + strand at 603.526 kb on + strand, within MPMX19_05118 at 605.317 kb on + strand at 605.317 kb on + strand at 605.317 kb on + strand at 605.317 kb on + strand at 605.318 kb on - strand at 605.318 kb on - strand at 605.318 kb on - strand at 605.318 kb on - strand at 605.318 kb on - strand at 605.318 kb on - strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.319 kb on + strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.320 kb on - strand at 605.374 kb on + strand at 605.374 kb on + strand at 605.374 kb on + strand at 605.374 kb on + strand at 605.374 kb on + strand at 605.374 kb on + strand at 605.374 kb on + strand at 605.374 kb on + strand at 605.375 kb on - strand at 605.375 kb on - strand at 605.375 kb on - strand at 605.375 kb on - strand at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.548 kb on + strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.549 kb on - strand, within MPMX19_05119 at 605.647 kb on + strand, within MPMX19_05119 at 605.647 kb on + strand, within MPMX19_05119 at 605.647 kb on + strand, within MPMX19_05119 at 605.647 kb on + strand, within MPMX19_05119 at 605.648 kb on - strand, within MPMX19_05119 at 605.648 kb on - strand, within MPMX19_05119 at 605.648 kb on - strand, within MPMX19_05119 at 605.648 kb on - strand, within MPMX19_05119 at 605.818 kb on + strand, within MPMX19_05119 at 605.819 kb on - strand, within MPMX19_05119 at 605.833 kb on + strand, within MPMX19_05119 at 605.833 kb on + strand, within MPMX19_05119 at 605.833 kb on + strand, within MPMX19_05119 at 605.833 kb on + strand, within MPMX19_05119 at 605.833 kb on + strand, within MPMX19_05119 at 605.834 kb on - strand, within MPMX19_05119 at 605.834 kb on - strand, within MPMX19_05119 at 605.834 kb on - strand, within MPMX19_05119 at 605.834 kb on - strand, within MPMX19_05119 at 605.834 kb on - strand, within MPMX19_05119 at 605.834 kb on - strand, within MPMX19_05119 at 605.842 kb on - strand, within MPMX19_05119 at 605.974 kb on + strand, within MPMX19_05119 at 605.975 kb on - strand, within MPMX19_05119 at 605.975 kb on - strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.977 kb on + strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119 at 605.978 kb on - strand, within MPMX19_05119
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 602,746 + MPMX19_05117 0.66 -0.8 602,746 + MPMX19_05117 0.66 +1.3 602,746 + MPMX19_05117 0.66 +0.5 602,746 + MPMX19_05117 0.66 +0.8 602,746 + MPMX19_05117 0.66 -0.3 602,746 + MPMX19_05117 0.66 -0.1 602,747 - MPMX19_05117 0.67 -1.5 602,747 - MPMX19_05117 0.67 +1.9 602,747 - MPMX19_05117 0.67 +0.6 602,747 - MPMX19_05117 0.67 +0.6 602,747 - MPMX19_05117 0.67 -0.1 602,747 - MPMX19_05117 0.67 -2.2 603,003 + -0.4 603,003 + -0.2 603,003 + -0.4 603,003 + -0.8 603,003 + +0.7 603,003 + +0.7 603,003 + -1.0 603,003 + -1.0 603,003 + +0.3 603,003 + -0.8 603,003 + -0.2 603,004 - -0.2 603,004 - +0.8 603,004 - -0.6 603,004 - -0.6 603,004 - -1.0 603,004 - +0.8 603,004 - +1.1 603,004 - -0.8 603,004 - +0.6 603,004 - -2.2 603,004 - -0.6 603,005 + +0.3 603,005 + -0.0 603,006 - +0.1 603,006 - +1.2 603,006 - -1.0 603,017 + +0.6 603,017 + -0.3 603,017 + +0.2 603,018 - -0.2 603,018 - +0.6 603,058 + -0.6 603,058 + +0.7 603,058 + -1.0 603,058 + -2.0 603,059 - -1.6 603,059 - +0.4 603,059 - -0.3 603,064 + -1.0 603,064 + +1.0 603,064 + -0.8 603,064 + -0.8 603,064 + -1.0 603,064 + -1.0 603,064 + +0.5 603,064 + +0.2 603,064 + +0.3 603,064 + -0.4 603,064 + +0.2 603,064 + -0.3 603,064 + +1.2 603,064 + -1.1 603,064 + -0.3 603,064 + +2.2 603,064 + -1.0 603,064 + -0.1 603,064 + +1.2 603,064 + -0.1 603,064 + -0.4 603,065 - -0.3 603,065 - -0.4 603,065 - -0.8 603,065 - +0.2 603,065 - -1.4 603,065 - -0.2 603,065 - +1.3 603,065 - +0.6 603,065 - +0.1 603,065 - -1.0 603,065 - +0.6 603,065 - +0.2 603,065 - +0.6 603,065 - -1.8 603,065 - -0.4 603,065 - +0.4 603,065 - -0.9 603,065 - -1.2 603,065 - +0.1 603,065 - -1.2 603,065 - +0.5 603,065 - -0.4 603,151 + -1.0 603,151 + +1.0 603,152 - -0.6 603,152 - -0.7 603,152 - -1.0 603,152 - +0.6 603,203 - -0.8 603,203 - -0.7 603,203 - +0.6 603,203 - -1.4 603,241 + +0.2 603,241 + +1.2 603,241 + +0.2 603,526 + MPMX19_05118 0.13 +2.2 605,317 + -2.0 605,317 + -2.4 605,317 + -3.1 605,317 + -1.0 605,318 - -0.8 605,318 - -1.8 605,318 - -1.8 605,318 - -2.0 605,318 - -0.9 605,318 - -2.6 605,319 + -0.4 605,319 + -2.2 605,319 + +0.2 605,319 + +0.6 605,319 + -1.9 605,319 + -1.2 605,319 + -1.4 605,319 + -2.4 605,319 + -0.4 605,319 + -1.4 605,319 + -1.8 605,319 + -1.4 605,319 + -0.8 605,319 + -1.5 605,319 + -2.9 605,319 + -2.4 605,319 + +0.6 605,320 - -3.3 605,320 - +1.6 605,320 - -1.2 605,320 - -0.4 605,320 - -2.8 605,320 - -2.4 605,320 - -2.2 605,320 - -0.6 605,320 - -1.5 605,320 - -1.9 605,320 - -2.6 605,320 - -0.4 605,320 - -1.0 605,320 - -1.2 605,320 - +0.4 605,320 - -0.4 605,374 + -1.8 605,374 + +1.2 605,374 + -1.4 605,374 + -1.0 605,374 + -1.9 605,374 + -1.2 605,374 + -1.1 605,374 + -0.4 605,375 - -1.9 605,375 - -1.0 605,375 - -1.8 605,375 - -1.8 605,548 + MPMX19_05119 0.18 -1.8 605,548 + MPMX19_05119 0.18 -1.8 605,548 + MPMX19_05119 0.18 -1.6 605,548 + MPMX19_05119 0.18 -2.2 605,548 + MPMX19_05119 0.18 -1.8 605,548 + MPMX19_05119 0.18 -2.6 605,548 + MPMX19_05119 0.18 -1.8 605,548 + MPMX19_05119 0.18 -1.4 605,548 + MPMX19_05119 0.18 -0.4 605,548 + MPMX19_05119 0.18 -1.4 605,548 + MPMX19_05119 0.18 -2.8 605,548 + MPMX19_05119 0.18 +0.6 605,548 + MPMX19_05119 0.18 -2.0 605,548 + MPMX19_05119 0.18 -1.4 605,548 + MPMX19_05119 0.18 -0.4 605,548 + MPMX19_05119 0.18 -1.0 605,548 + MPMX19_05119 0.18 +0.2 605,548 + MPMX19_05119 0.18 -1.0 605,548 + MPMX19_05119 0.18 -1.0 605,549 - MPMX19_05119 0.18 -1.8 605,549 - MPMX19_05119 0.18 -0.0 605,549 - MPMX19_05119 0.18 -0.6 605,549 - MPMX19_05119 0.18 -2.0 605,549 - MPMX19_05119 0.18 -0.7 605,549 - MPMX19_05119 0.18 -0.8 605,549 - MPMX19_05119 0.18 -1.8 605,549 - MPMX19_05119 0.18 -2.0 605,549 - MPMX19_05119 0.18 -2.4 605,549 - MPMX19_05119 0.18 -1.4 605,647 + MPMX19_05119 0.25 -2.2 605,647 + MPMX19_05119 0.25 -1.4 605,647 + MPMX19_05119 0.25 -1.3 605,647 + MPMX19_05119 0.25 -1.2 605,648 - MPMX19_05119 0.25 -0.4 605,648 - MPMX19_05119 0.25 -1.0 605,648 - MPMX19_05119 0.25 -0.4 605,648 - MPMX19_05119 0.25 -0.8 605,818 + MPMX19_05119 0.36 -2.2 605,819 - MPMX19_05119 0.36 -0.3 605,833 + MPMX19_05119 0.37 -2.9 605,833 + MPMX19_05119 0.37 -2.2 605,833 + MPMX19_05119 0.37 -1.8 605,833 + MPMX19_05119 0.37 -0.1 605,833 + MPMX19_05119 0.37 -0.5 605,834 - MPMX19_05119 0.37 -1.0 605,834 - MPMX19_05119 0.37 -1.6 605,834 - MPMX19_05119 0.37 -2.0 605,834 - MPMX19_05119 0.37 -1.1 605,834 - MPMX19_05119 0.37 -1.4 605,834 - MPMX19_05119 0.37 -1.1 605,842 - MPMX19_05119 0.38 -1.8 605,974 + MPMX19_05119 0.46 -0.4 605,975 - MPMX19_05119 0.46 -1.8 605,975 - MPMX19_05119 0.46 -0.8 605,977 + MPMX19_05119 0.47 -2.8 605,977 + MPMX19_05119 0.47 +0.1 605,977 + MPMX19_05119 0.47 +0.6 605,977 + MPMX19_05119 0.47 -0.8 605,977 + MPMX19_05119 0.47 -1.4 605,977 + MPMX19_05119 0.47 -0.1 605,977 + MPMX19_05119 0.47 -2.0 605,977 + MPMX19_05119 0.47 -1.2 605,977 + MPMX19_05119 0.47 -0.8 605,977 + MPMX19_05119 0.47 -0.6 605,977 + MPMX19_05119 0.47 +0.6 605,977 + MPMX19_05119 0.47 -0.8 605,977 + MPMX19_05119 0.47 -0.4 605,977 + MPMX19_05119 0.47 -0.8 605,977 + MPMX19_05119 0.47 -1.4 605,977 + MPMX19_05119 0.47 -2.2 605,978 - MPMX19_05119 0.47 -0.7 605,978 - MPMX19_05119 0.47 -1.4 605,978 - MPMX19_05119 0.47 -1.2 605,978 - MPMX19_05119 0.47 -1.8 605,978 - MPMX19_05119 0.47 -0.2 605,978 - MPMX19_05119 0.47 -0.2 605,978 - MPMX19_05119 0.47 -1.8 605,978 - MPMX19_05119 0.47 +0.6 605,978 - MPMX19_05119 0.47 -1.4 605,978 - MPMX19_05119 0.47 -2.0 605,978 - MPMX19_05119 0.47 -0.4 605,978 - MPMX19_05119 0.47 +0.2 605,978 - MPMX19_05119 0.47 -1.4 605,978 - MPMX19_05119 0.47 -2.2 605,978 - MPMX19_05119 0.47 -1.6 605,978 - MPMX19_05119 0.47 -0.7 605,978 - MPMX19_05119 0.47 -1.6 605,978 - MPMX19_05119 0.47 -2.2 605,978 - MPMX19_05119 0.47 -0.8
Or see this region's nucleotide sequence