Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00937 and MPMX19_00938 are separated by 41 nucleotides MPMX19_00938 and MPMX19_00939 are separated by 188 nucleotides MPMX19_00939 and MPMX19_00940 are separated by 127 nucleotides
MPMX19_00937: MPMX19_00937 - Malonyl CoA-acyl carrier protein transacylase, at 974,072 to 975,013
_00937
MPMX19_00938: MPMX19_00938 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 975,055 to 975,792
_00938
MPMX19_00939: MPMX19_00939 - Acyl carrier protein, at 975,981 to 976,220
_00939
MPMX19_00940: MPMX19_00940 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 976,348 to 977,610
_00940
Position (kb) 975
976
977 Strain fitness (log2 ratio) -2
-1
0
1
2 at 975.017 kb on + strand at 975.017 kb on + strand at 975.017 kb on + strand at 975.017 kb on + strand at 975.017 kb on + strand at 975.017 kb on + strand at 975.017 kb on + strand at 975.031 kb on + strand at 975.031 kb on + strand at 975.031 kb on + strand at 975.031 kb on + strand at 975.031 kb on + strand at 975.031 kb on + strand at 976.319 kb on + strand at 976.319 kb on + strand at 976.319 kb on + strand at 976.319 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 975,017 + +0.1 975,017 + +0.0 975,017 + +0.3 975,017 + +1.9 975,017 + -0.4 975,017 + +0.2 975,017 + -0.6 975,031 + -0.7 975,031 + -0.8 975,031 + +1.1 975,031 + +0.5 975,031 + -0.2 975,031 + -2.3 976,319 + +0.2 976,319 + -0.1 976,319 + -1.8 976,319 + -1.8
Or see this region's nucleotide sequence