Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00908 and MPMX19_00909 are separated by 203 nucleotides MPMX19_00909 and MPMX19_00910 are separated by 47 nucleotides MPMX19_00910 and MPMX19_00911 are separated by 160 nucleotides MPMX19_00911 and MPMX19_00912 are separated by 216 nucleotides
MPMX19_00908: MPMX19_00908 - DNA mismatch repair protein MutS, at 942,363 to 945,044
_00908
MPMX19_00909: MPMX19_00909 - hypothetical protein, at 945,248 to 945,778
_00909
MPMX19_00910: MPMX19_00910 - hypothetical protein, at 945,826 to 946,191
_00910
MPMX19_00911: MPMX19_00911 - hypothetical protein, at 946,352 to 946,714
_00911
MPMX19_00912: MPMX19_00912 - Bifunctional uridylyltransferase/uridylyl-removing enzyme, at 946,931 to 949,774
_00912
Position (kb) 945
946
947 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.944 kb on + strand at 944.945 kb on - strand at 944.945 kb on - strand at 944.986 kb on + strand at 944.986 kb on + strand at 944.986 kb on + strand at 944.986 kb on + strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 945.091 kb on + strand at 945.091 kb on + strand at 945.091 kb on + strand at 945.091 kb on + strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.101 kb on + strand at 945.102 kb on - strand at 945.102 kb on - strand at 945.210 kb on + strand at 945.210 kb on + strand at 945.210 kb on + strand at 945.210 kb on + strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.232 kb on + strand at 945.446 kb on + strand, within MPMX19_00909 at 945.446 kb on + strand, within MPMX19_00909 at 945.446 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.598 kb on + strand, within MPMX19_00909 at 945.598 kb on + strand, within MPMX19_00909 at 945.599 kb on - strand, within MPMX19_00909 at 945.599 kb on - strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.798 kb on + strand at 945.798 kb on + strand at 945.799 kb on - strand at 945.799 kb on - strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.124 kb on + strand, within MPMX19_00910 at 946.125 kb on - strand, within MPMX19_00910 at 946.133 kb on + strand, within MPMX19_00910 at 946.133 kb on + strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.413 kb on + strand, within MPMX19_00911 at 946.414 kb on - strand, within MPMX19_00911 at 946.842 kb on + strand at 946.842 kb on + strand at 946.842 kb on + strand at 946.842 kb on + strand at 946.842 kb on + strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.855 kb on + strand at 946.855 kb on + strand at 946.855 kb on + strand at 946.856 kb on - strand at 946.856 kb on - strand at 946.856 kb on - strand at 946.861 kb on + strand at 946.861 kb on + strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.906 kb on + strand at 946.906 kb on + strand at 946.906 kb on + strand at 946.906 kb on + strand at 946.907 kb on - strand at 946.907 kb on - strand at 946.907 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 944,926 + +0.7 944,926 + +0.2 944,926 + +0.5 944,927 - -0.5 944,927 - -1.8 944,927 - -3.1 944,927 - +0.1 944,944 + -0.9 944,945 - -0.9 944,945 - -2.3 944,986 + -1.8 944,986 + -1.2 944,986 + +0.4 944,986 + -0.8 944,987 - -0.1 944,987 - -0.3 944,987 - -0.2 944,987 - -0.3 944,987 - -0.0 944,987 - -0.7 945,091 + +0.0 945,091 + +1.0 945,091 + +0.5 945,091 + +1.2 945,092 - +1.9 945,092 - -1.8 945,092 - -0.3 945,092 - +0.4 945,092 - +0.8 945,092 - -0.8 945,092 - +0.9 945,092 - +0.0 945,092 - -0.5 945,092 - -1.8 945,101 + +0.3 945,102 - +2.4 945,102 - -1.0 945,210 + +0.1 945,210 + -1.0 945,210 + -1.6 945,210 + -0.5 945,211 - +0.0 945,211 - +1.5 945,211 - -1.2 945,211 - +0.0 945,211 - -0.5 945,211 - +0.2 945,211 - -0.1 945,211 - -2.1 945,211 - +0.3 945,211 - -0.1 945,211 - +0.5 945,211 - -1.1 945,211 - +0.2 945,211 - -0.7 945,211 - -0.6 945,211 - +0.3 945,216 - -0.8 945,216 - -0.8 945,216 - +0.2 945,216 - -0.5 945,216 - +0.1 945,216 - -0.8 945,216 - -1.2 945,216 - -1.2 945,232 + -0.6 945,446 + MPMX19_00909 0.37 +1.0 945,446 + MPMX19_00909 0.37 +0.9 945,446 + MPMX19_00909 0.37 -0.7 945,494 + MPMX19_00909 0.46 +1.3 945,494 + MPMX19_00909 0.46 -0.5 945,494 + MPMX19_00909 0.46 -0.7 945,494 + MPMX19_00909 0.46 -1.7 945,494 + MPMX19_00909 0.46 -1.8 945,494 + MPMX19_00909 0.46 -1.1 945,495 - MPMX19_00909 0.47 -0.8 945,495 - MPMX19_00909 0.47 +0.3 945,495 - MPMX19_00909 0.47 +0.3 945,495 - MPMX19_00909 0.47 -0.8 945,495 - MPMX19_00909 0.47 -0.5 945,598 + MPMX19_00909 0.66 -0.8 945,598 + MPMX19_00909 0.66 +0.2 945,599 - MPMX19_00909 0.66 -2.1 945,599 - MPMX19_00909 0.66 -1.4 945,605 + MPMX19_00909 0.67 -1.1 945,605 + MPMX19_00909 0.67 -1.0 945,605 + MPMX19_00909 0.67 +0.4 945,605 + MPMX19_00909 0.67 -0.4 945,605 + MPMX19_00909 0.67 -0.9 945,606 - MPMX19_00909 0.67 +1.1 945,606 - MPMX19_00909 0.67 -1.8 945,606 - MPMX19_00909 0.67 -0.1 945,606 - MPMX19_00909 0.67 +0.5 945,606 - MPMX19_00909 0.67 -0.2 945,798 + +0.5 945,798 + -0.3 945,799 - -1.3 945,799 - -0.0 945,810 + +0.1 945,810 + +0.1 945,810 + +1.5 945,810 + -0.1 945,810 + +1.3 945,810 + -0.8 945,810 + -0.3 945,810 + -0.0 945,810 + -0.0 945,810 + -0.8 945,810 + -0.0 945,810 + -0.5 945,811 - -1.1 945,811 - -0.0 945,811 - -1.1 945,811 - +0.2 945,811 - -0.1 945,811 - -0.3 945,811 - +0.2 945,811 - -2.7 945,811 - -0.1 945,811 - +0.5 945,811 - -1.2 945,811 - +0.5 945,811 - -1.5 945,812 + -1.8 945,812 + +0.5 945,812 + +0.7 945,812 + -0.7 945,812 + +0.6 945,812 + -0.9 945,812 + +0.9 945,812 + -1.1 945,812 + +0.3 945,812 + +1.0 945,812 + +0.8 945,812 + +1.1 945,812 + -0.1 945,812 + -0.7 945,813 - -0.4 945,813 - +1.3 945,813 - +0.2 945,813 - +0.5 945,813 - +1.0 945,813 - -0.7 945,813 - -0.8 945,813 - +1.7 945,813 - +0.1 945,813 - -0.1 945,813 - -0.3 945,813 - -0.4 945,813 - +1.0 945,813 - +0.5 945,813 - -1.0 945,813 - +0.3 945,813 - -0.2 946,109 + MPMX19_00910 0.77 +0.1 946,109 + MPMX19_00910 0.77 +0.7 946,109 + MPMX19_00910 0.77 +2.1 946,109 + MPMX19_00910 0.77 +0.8 946,109 + MPMX19_00910 0.77 -0.3 946,109 + MPMX19_00910 0.77 +0.7 946,109 + MPMX19_00910 0.77 -0.2 946,109 + MPMX19_00910 0.77 -0.6 946,110 - MPMX19_00910 0.78 +0.1 946,110 - MPMX19_00910 0.78 -0.1 946,110 - MPMX19_00910 0.78 -0.8 946,110 - MPMX19_00910 0.78 -0.9 946,124 + MPMX19_00910 0.81 -0.9 946,125 - MPMX19_00910 0.82 -0.9 946,133 + MPMX19_00910 0.84 -0.3 946,133 + MPMX19_00910 0.84 -0.9 946,134 - MPMX19_00910 0.84 -0.8 946,134 - MPMX19_00910 0.84 -0.1 946,134 - MPMX19_00910 0.84 +1.1 946,134 - MPMX19_00910 0.84 -0.2 946,413 + MPMX19_00911 0.17 -1.6 946,414 - MPMX19_00911 0.17 +0.5 946,842 + -0.9 946,842 + -0.0 946,842 + -0.8 946,842 + -0.8 946,842 + +0.5 946,843 - +0.2 946,843 - +0.2 946,843 - -0.2 946,843 - -0.2 946,843 - +0.5 946,843 - -0.5 946,843 - -1.8 946,843 - -0.2 946,843 - -0.9 946,855 + -0.2 946,855 + +1.0 946,855 + +0.1 946,856 - -1.5 946,856 - +1.4 946,856 - -0.6 946,861 + +0.2 946,861 + +1.6 946,862 - +0.5 946,862 - -0.7 946,862 - +1.4 946,862 - +0.2 946,862 - -0.7 946,862 - +0.8 946,862 - -1.5 946,863 + -0.2 946,863 + +0.1 946,863 + -0.1 946,863 + +1.5 946,863 + -0.0 946,863 + -0.1 946,863 + +0.8 946,863 + +0.9 946,863 + -1.1 946,863 + +0.2 946,864 - -0.5 946,864 - +0.2 946,864 - -2.7 946,864 - +0.0 946,864 - +0.5 946,864 - +0.1 946,864 - -1.4 946,864 - -0.1 946,864 - +0.5 946,864 - -0.6 946,906 + +1.1 946,906 + +1.5 946,906 + -0.2 946,906 + +0.5 946,907 - +0.4 946,907 - +0.0 946,907 - -0.1
Or see this region's nucleotide sequence