Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00220 and MPMX19_00221 are separated by 144 nucleotides MPMX19_00221 and MPMX19_00222 are separated by 21 nucleotides MPMX19_00222 and MPMX19_00223 are separated by 241 nucleotides
MPMX19_00220: MPMX19_00220 - Transcriptional regulatory protein FixJ, at 222,366 to 223,079
_00220
MPMX19_00221: MPMX19_00221 - hypothetical protein, at 223,224 to 224,441
_00221
MPMX19_00222: MPMX19_00222 - hypothetical protein, at 224,463 to 224,732
_00222
MPMX19_00223: MPMX19_00223 - Zinc-type alcohol dehydrogenase-like protein, at 224,974 to 225,999
_00223
Position (kb) 223
224
225 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 222.275 kb on - strand at 223.179 kb on - strand at 223.179 kb on - strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.223 kb on + strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.224 kb on - strand at 223.374 kb on + strand, within MPMX19_00221 at 223.374 kb on + strand, within MPMX19_00221 at 223.374 kb on + strand, within MPMX19_00221 at 223.374 kb on + strand, within MPMX19_00221 at 223.374 kb on + strand, within MPMX19_00221 at 223.374 kb on + strand, within MPMX19_00221 at 223.374 kb on + strand, within MPMX19_00221 at 223.374 kb on + strand, within MPMX19_00221 at 223.375 kb on - strand, within MPMX19_00221 at 223.375 kb on - strand, within MPMX19_00221 at 223.375 kb on - strand, within MPMX19_00221 at 223.375 kb on - strand, within MPMX19_00221 at 223.449 kb on + strand, within MPMX19_00221 at 223.449 kb on + strand, within MPMX19_00221 at 223.449 kb on + strand, within MPMX19_00221 at 223.449 kb on + strand, within MPMX19_00221 at 223.449 kb on + strand, within MPMX19_00221 at 223.449 kb on + strand, within MPMX19_00221 at 223.449 kb on + strand, within MPMX19_00221 at 223.450 kb on - strand, within MPMX19_00221 at 223.450 kb on - strand, within MPMX19_00221 at 223.450 kb on - strand, within MPMX19_00221 at 223.450 kb on - strand, within MPMX19_00221 at 223.450 kb on - strand, within MPMX19_00221 at 223.450 kb on - strand, within MPMX19_00221 at 224.121 kb on + strand, within MPMX19_00221 at 224.122 kb on - strand, within MPMX19_00221 at 224.268 kb on + strand, within MPMX19_00221 at 224.268 kb on + strand, within MPMX19_00221 at 224.268 kb on + strand, within MPMX19_00221 at 224.268 kb on + strand, within MPMX19_00221 at 224.269 kb on - strand, within MPMX19_00221 at 224.269 kb on - strand, within MPMX19_00221 at 224.269 kb on - strand, within MPMX19_00221 at 224.558 kb on - strand, within MPMX19_00222 at 224.558 kb on - strand, within MPMX19_00222 at 224.560 kb on + strand, within MPMX19_00222 at 224.561 kb on - strand, within MPMX19_00222 at 224.561 kb on - strand, within MPMX19_00222 at 224.596 kb on + strand, within MPMX19_00222 at 224.596 kb on + strand, within MPMX19_00222 at 224.596 kb on + strand, within MPMX19_00222 at 224.596 kb on + strand, within MPMX19_00222 at 224.597 kb on - strand, within MPMX19_00222 at 224.597 kb on - strand, within MPMX19_00222 at 224.597 kb on - strand, within MPMX19_00222 at 224.632 kb on + strand, within MPMX19_00222 at 224.633 kb on - strand, within MPMX19_00222 at 224.633 kb on - strand, within MPMX19_00222 at 224.633 kb on - strand, within MPMX19_00222 at 224.641 kb on + strand, within MPMX19_00222 at 224.641 kb on + strand, within MPMX19_00222 at 224.641 kb on + strand, within MPMX19_00222 at 224.641 kb on + strand, within MPMX19_00222 at 224.642 kb on - strand, within MPMX19_00222 at 224.642 kb on - strand, within MPMX19_00222 at 224.642 kb on - strand, within MPMX19_00222 at 224.642 kb on - strand, within MPMX19_00222 at 224.644 kb on + strand, within MPMX19_00222 at 224.644 kb on + strand, within MPMX19_00222 at 224.644 kb on + strand, within MPMX19_00222 at 224.644 kb on + strand, within MPMX19_00222 at 224.644 kb on + strand, within MPMX19_00222 at 224.644 kb on + strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.645 kb on - strand, within MPMX19_00222 at 224.653 kb on + strand, within MPMX19_00222 at 224.653 kb on + strand, within MPMX19_00222 at 224.653 kb on + strand, within MPMX19_00222 at 224.654 kb on - strand, within MPMX19_00222 at 224.654 kb on - strand, within MPMX19_00222 at 224.654 kb on - strand, within MPMX19_00222 at 224.654 kb on - strand, within MPMX19_00222 at 224.788 kb on + strand at 224.788 kb on + strand at 224.788 kb on + strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.789 kb on - strand at 224.812 kb on + strand at 224.813 kb on - strand at 224.819 kb on + strand at 224.819 kb on + strand at 224.819 kb on + strand at 224.819 kb on + strand at 224.819 kb on + strand at 224.819 kb on + strand at 224.819 kb on + strand at 224.819 kb on + strand at 224.820 kb on - strand at 224.820 kb on - strand at 224.820 kb on - strand at 224.820 kb on - strand at 224.820 kb on - strand at 224.820 kb on - strand at 224.899 kb on + strand at 224.899 kb on + strand at 224.900 kb on - strand at 224.912 kb on + strand at 224.912 kb on + strand at 224.912 kb on + strand at 224.912 kb on + strand at 224.913 kb on - strand at 224.913 kb on - strand at 224.913 kb on - strand at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.238 kb on + strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.239 kb on - strand, within MPMX19_00223 at 225.277 kb on + strand, within MPMX19_00223 at 225.277 kb on + strand, within MPMX19_00223 at 225.277 kb on + strand, within MPMX19_00223 at 225.277 kb on + strand, within MPMX19_00223 at 225.277 kb on + strand, within MPMX19_00223 at 225.277 kb on + strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223 at 225.278 kb on - strand, within MPMX19_00223
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 222,275 - -1.4 223,179 - +0.0 223,179 - -1.3 223,223 + +0.3 223,223 + +0.7 223,223 + -1.3 223,223 + +0.3 223,223 + -0.3 223,223 + +0.3 223,223 + -0.4 223,223 + +1.3 223,223 + -1.3 223,223 + -1.0 223,223 + -1.0 223,223 + -2.8 223,223 + -0.4 223,223 + -0.3 223,223 + -0.7 223,223 + -0.4 223,223 + +1.7 223,223 + +0.5 223,223 + -0.7 223,223 + -1.3 223,223 + +0.2 223,223 + +0.5 223,223 + -1.2 223,223 + -1.1 223,223 + +0.6 223,224 - -1.3 223,224 - +0.7 223,224 - +2.8 223,224 - -2.0 223,224 - +1.7 223,224 - -0.4 223,224 - +0.0 223,224 - -0.4 223,224 - +0.0 223,224 - -1.3 223,224 - +0.7 223,224 - -1.3 223,224 - -1.7 223,224 - -0.7 223,224 - -1.7 223,224 - -0.9 223,224 - -1.1 223,224 - -1.0 223,224 - -2.3 223,224 - -1.1 223,224 - -0.5 223,374 + MPMX19_00221 0.12 -2.7 223,374 + MPMX19_00221 0.12 +0.7 223,374 + MPMX19_00221 0.12 -0.7 223,374 + MPMX19_00221 0.12 -2.3 223,374 + MPMX19_00221 0.12 -1.3 223,374 + MPMX19_00221 0.12 -1.7 223,374 + MPMX19_00221 0.12 -0.5 223,374 + MPMX19_00221 0.12 +0.3 223,375 - MPMX19_00221 0.12 +0.7 223,375 - MPMX19_00221 0.12 +2.9 223,375 - MPMX19_00221 0.12 -0.3 223,375 - MPMX19_00221 0.12 +0.7 223,449 + MPMX19_00221 0.18 -0.7 223,449 + MPMX19_00221 0.18 +1.0 223,449 + MPMX19_00221 0.18 -1.7 223,449 + MPMX19_00221 0.18 -0.1 223,449 + MPMX19_00221 0.18 -0.7 223,449 + MPMX19_00221 0.18 -1.3 223,449 + MPMX19_00221 0.18 +0.3 223,450 - MPMX19_00221 0.19 -1.7 223,450 - MPMX19_00221 0.19 -2.0 223,450 - MPMX19_00221 0.19 -1.7 223,450 - MPMX19_00221 0.19 -0.7 223,450 - MPMX19_00221 0.19 -1.3 223,450 - MPMX19_00221 0.19 -0.4 224,121 + MPMX19_00221 0.74 -0.2 224,122 - MPMX19_00221 0.74 -0.3 224,268 + MPMX19_00221 0.86 -0.4 224,268 + MPMX19_00221 0.86 -0.7 224,268 + MPMX19_00221 0.86 -0.5 224,268 + MPMX19_00221 0.86 -1.3 224,269 - MPMX19_00221 0.86 -0.3 224,269 - MPMX19_00221 0.86 -1.3 224,269 - MPMX19_00221 0.86 -0.7 224,558 - MPMX19_00222 0.35 +0.3 224,558 - MPMX19_00222 0.35 -1.8 224,560 + MPMX19_00222 0.36 +0.6 224,561 - MPMX19_00222 0.36 -0.7 224,561 - MPMX19_00222 0.36 +0.5 224,596 + MPMX19_00222 0.49 +0.9 224,596 + MPMX19_00222 0.49 -0.3 224,596 + MPMX19_00222 0.49 -0.2 224,596 + MPMX19_00222 0.49 -0.7 224,597 - MPMX19_00222 0.50 -0.1 224,597 - MPMX19_00222 0.50 +0.2 224,597 - MPMX19_00222 0.50 -1.3 224,632 + MPMX19_00222 0.63 -0.9 224,633 - MPMX19_00222 0.63 -0.7 224,633 - MPMX19_00222 0.63 +1.6 224,633 - MPMX19_00222 0.63 -0.3 224,641 + MPMX19_00222 0.66 -0.3 224,641 + MPMX19_00222 0.66 -0.6 224,641 + MPMX19_00222 0.66 -0.6 224,641 + MPMX19_00222 0.66 +1.1 224,642 - MPMX19_00222 0.66 -0.3 224,642 - MPMX19_00222 0.66 -0.4 224,642 - MPMX19_00222 0.66 -1.0 224,642 - MPMX19_00222 0.66 -1.1 224,644 + MPMX19_00222 0.67 +0.2 224,644 + MPMX19_00222 0.67 -0.3 224,644 + MPMX19_00222 0.67 -0.5 224,644 + MPMX19_00222 0.67 -0.1 224,644 + MPMX19_00222 0.67 +1.6 224,644 + MPMX19_00222 0.67 -0.1 224,645 - MPMX19_00222 0.67 -1.0 224,645 - MPMX19_00222 0.67 -1.3 224,645 - MPMX19_00222 0.67 +0.3 224,645 - MPMX19_00222 0.67 +1.5 224,645 - MPMX19_00222 0.67 -0.7 224,645 - MPMX19_00222 0.67 -1.4 224,645 - MPMX19_00222 0.67 -0.1 224,645 - MPMX19_00222 0.67 +1.3 224,645 - MPMX19_00222 0.67 -0.7 224,653 + MPMX19_00222 0.70 +0.9 224,653 + MPMX19_00222 0.70 -1.0 224,653 + MPMX19_00222 0.70 -1.4 224,654 - MPMX19_00222 0.71 -0.7 224,654 - MPMX19_00222 0.71 -1.3 224,654 - MPMX19_00222 0.71 -2.3 224,654 - MPMX19_00222 0.71 -0.4 224,788 + -1.5 224,788 + -1.7 224,788 + +1.1 224,789 - -1.7 224,789 - +0.7 224,789 - -1.7 224,789 - +2.3 224,789 - +1.1 224,789 - -0.7 224,789 - -0.9 224,789 - +0.1 224,789 - -0.7 224,812 + +0.1 224,813 - -0.7 224,819 + +0.4 224,819 + -1.5 224,819 + -0.3 224,819 + +1.3 224,819 + +0.7 224,819 + -0.3 224,819 + -0.8 224,819 + -1.1 224,820 - +0.6 224,820 - -0.3 224,820 - -0.3 224,820 - -1.7 224,820 - -0.1 224,820 - -0.1 224,899 + -0.1 224,899 + +0.3 224,900 - -0.4 224,912 + -0.3 224,912 + -0.7 224,912 + -0.9 224,912 + +1.1 224,913 - +0.3 224,913 - +1.0 224,913 - -0.3 225,238 + MPMX19_00223 0.26 -0.9 225,238 + MPMX19_00223 0.26 -0.8 225,238 + MPMX19_00223 0.26 -0.4 225,238 + MPMX19_00223 0.26 -1.7 225,238 + MPMX19_00223 0.26 -1.3 225,238 + MPMX19_00223 0.26 -0.3 225,238 + MPMX19_00223 0.26 +0.0 225,238 + MPMX19_00223 0.26 +0.8 225,238 + MPMX19_00223 0.26 -0.1 225,238 + MPMX19_00223 0.26 -1.5 225,239 - MPMX19_00223 0.26 -2.1 225,239 - MPMX19_00223 0.26 +0.7 225,239 - MPMX19_00223 0.26 +0.6 225,239 - MPMX19_00223 0.26 +1.3 225,239 - MPMX19_00223 0.26 -0.9 225,239 - MPMX19_00223 0.26 -0.3 225,239 - MPMX19_00223 0.26 -0.3 225,239 - MPMX19_00223 0.26 +0.6 225,239 - MPMX19_00223 0.26 +1.3 225,239 - MPMX19_00223 0.26 +0.1 225,277 + MPMX19_00223 0.30 -0.9 225,277 + MPMX19_00223 0.30 -0.7 225,277 + MPMX19_00223 0.30 +0.5 225,277 + MPMX19_00223 0.30 +1.7 225,277 + MPMX19_00223 0.30 -1.0 225,277 + MPMX19_00223 0.30 -0.8 225,278 - MPMX19_00223 0.30 +0.3 225,278 - MPMX19_00223 0.30 -0.4 225,278 - MPMX19_00223 0.30 +0.7 225,278 - MPMX19_00223 0.30 -0.2 225,278 - MPMX19_00223 0.30 +0.2 225,278 - MPMX19_00223 0.30 -0.7 225,278 - MPMX19_00223 0.30 -0.0 225,278 - MPMX19_00223 0.30 +0.1
Or see this region's nucleotide sequence