Experiment: Tween 20 (C), 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15425 and A4249_RS15430 are separated by 171 nucleotides A4249_RS15430 and A4249_RS15435 are separated by 41 nucleotides A4249_RS15435 and A4249_RS15440 overlap by 4 nucleotides A4249_RS15440 and A4249_RS15445 overlap by 2 nucleotides
A4249_RS15425: A4249_RS15425 - helix-turn-helix transcriptional regulator, at 3,125,852 to 3,126,205
_RS15425
A4249_RS15430: A4249_RS15430 - tRNA-Thr, at 3,126,377 to 3,126,452
_RS15430
A4249_RS15435: A4249_RS15435 - uroporphyrinogen-III synthase, at 3,126,494 to 3,127,201
_RS15435
A4249_RS15440: A4249_RS15440 - hydroxymethylbilane synthase, at 3,127,198 to 3,128,163
_RS15440
A4249_RS15445: A4249_RS15445 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 3,128,162 to 3,129,349
_RS15445
Position (kb)
3127
3128
3129 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3126.221 kb on + strand at 3126.221 kb on + strand at 3126.221 kb on + strand at 3126.221 kb on + strand at 3126.222 kb on - strand at 3126.222 kb on - strand at 3126.222 kb on - strand at 3126.222 kb on - strand at 3126.222 kb on - strand at 3126.222 kb on - strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.225 kb on + strand at 3126.226 kb on - strand at 3126.226 kb on - strand at 3126.226 kb on - strand at 3126.226 kb on - strand at 3126.226 kb on - strand at 3126.276 kb on + strand at 3126.276 kb on + strand at 3126.276 kb on + strand at 3126.276 kb on + strand at 3126.276 kb on + strand at 3126.276 kb on + strand at 3126.276 kb on + strand at 3126.277 kb on - strand at 3126.277 kb on - strand at 3126.277 kb on - strand at 3126.277 kb on - strand at 3126.277 kb on - strand at 3126.277 kb on - strand at 3126.277 kb on - strand at 3126.280 kb on + strand at 3126.280 kb on + strand at 3126.290 kb on + strand at 3126.290 kb on + strand at 3126.290 kb on + strand at 3126.291 kb on - strand at 3126.327 kb on + strand at 3126.340 kb on + strand at 3126.340 kb on + strand at 3126.341 kb on - strand at 3126.341 kb on - strand at 3126.341 kb on - strand at 3126.341 kb on - strand at 3128.224 kb on + strand at 3128.224 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 30C remove 3,126,221 + -1.2 3,126,221 + -1.0 3,126,221 + -0.4 3,126,221 + +0.4 3,126,222 - -0.7 3,126,222 - +0.5 3,126,222 - -0.8 3,126,222 - -0.4 3,126,222 - -1.6 3,126,222 - +0.5 3,126,225 + -0.9 3,126,225 + -0.4 3,126,225 + -0.9 3,126,225 + -0.7 3,126,225 + -1.3 3,126,225 + +0.4 3,126,225 + -2.4 3,126,225 + -0.6 3,126,225 + +0.1 3,126,226 - -1.0 3,126,226 - -1.2 3,126,226 - +1.4 3,126,226 - -2.0 3,126,226 - -1.9 3,126,276 + +0.4 3,126,276 + +1.7 3,126,276 + -0.7 3,126,276 + +2.0 3,126,276 + -1.6 3,126,276 + -0.5 3,126,276 + -0.5 3,126,277 - -1.2 3,126,277 - -0.7 3,126,277 - -0.5 3,126,277 - +0.9 3,126,277 - -0.4 3,126,277 - +1.4 3,126,277 - -0.2 3,126,280 + +1.6 3,126,280 + -1.6 3,126,290 + +0.4 3,126,290 + +0.5 3,126,290 + -0.3 3,126,291 - -1.6 3,126,327 + -0.2 3,126,340 + -0.2 3,126,340 + -1.6 3,126,341 - -0.4 3,126,341 - +0.1 3,126,341 - -0.4 3,126,341 - +0.7 3,128,224 + -2.6 3,128,224 + +0.7
Or see this region's nucleotide sequence