Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14000

Experiment: Tween 20 (C), 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13995 and A4249_RS14000 are separated by 18 nucleotidesA4249_RS14000 and A4249_RS14005 are separated by 108 nucleotides A4249_RS13995: A4249_RS13995 - transcription termination factor NusA, at 2,821,374 to 2,823,107 _RS13995 A4249_RS14000: A4249_RS14000 - RNA-binding protein, at 2,823,126 to 2,823,785 _RS14000 A4249_RS14005: A4249_RS14005 - translation initiation factor IF-2, at 2,823,894 to 2,826,920 _RS14005 Position (kb) 2823 2824Strain fitness (log2 ratio) -2 -1 0 1at 2822.985 kb on + strandat 2823.018 kb on + strandat 2823.018 kb on + strandat 2823.019 kb on - strandat 2823.019 kb on - strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.125 kb on + strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.126 kb on - strandat 2823.847 kb on + strandat 2823.847 kb on + strandat 2823.850 kb on + strandat 2823.850 kb on + strandat 2823.850 kb on + strandat 2823.850 kb on + strandat 2823.850 kb on + strandat 2823.850 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 30C
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2,822,985 + -1.4
2,823,018 + -0.7
2,823,018 + +1.0
2,823,019 - -0.4
2,823,019 - +0.5
2,823,125 + -2.3
2,823,125 + -0.3
2,823,125 + -1.5
2,823,125 + -0.5
2,823,125 + -0.7
2,823,125 + +0.7
2,823,125 + -2.3
2,823,125 + -0.0
2,823,125 + +1.0
2,823,125 + -1.8
2,823,125 + +0.1
2,823,126 - +0.1
2,823,126 - +0.5
2,823,126 - +0.6
2,823,126 - -1.1
2,823,126 - -1.1
2,823,126 - -0.1
2,823,126 - +0.0
2,823,126 - +0.8
2,823,126 - -0.5
2,823,126 - +0.7
2,823,126 - +1.1
2,823,126 - -0.3
2,823,126 - -0.8
2,823,126 - -0.5
2,823,126 - -0.6
2,823,126 - -1.0
2,823,126 - +0.2
2,823,847 + +0.5
2,823,847 + -0.5
2,823,850 + -0.4
2,823,850 + +0.3
2,823,850 + +1.5
2,823,850 + +0.7
2,823,850 + +0.3
2,823,850 + +1.3

Or see this region's nucleotide sequence