Experiment: Tween 20 (C), 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13820 and A4249_RS13825 are separated by 56 nucleotides A4249_RS13825 and A4249_RS13830 are separated by 81 nucleotides A4249_RS13830 and A4249_RS13835 overlap by 1 nucleotides A4249_RS13835 and A4249_RS13840 are separated by 37 nucleotides
A4249_RS13820: A4249_RS13820 - hypothetical protein, at 2,790,759 to 2,791,052
_RS13820
A4249_RS13825: A4249_RS13825 - zinc-finger domain-containing protein, at 2,791,109 to 2,791,348
_RS13825
A4249_RS13830: A4249_RS13830 - VOC family protein, at 2,791,430 to 2,791,870
_RS13830
A4249_RS13835: A4249_RS13835 - hypothetical protein, at 2,791,870 to 2,792,487
_RS13835
A4249_RS13840: A4249_RS13840 - DNA polymerase I, at 2,792,525 to 2,795,437
_RS13840
Position (kb)
2791
2792
2793 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2791.073 kb on - strand at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.220 kb on + strand, within A4249_RS13825 at 2791.221 kb on - strand, within A4249_RS13825 at 2791.221 kb on - strand, within A4249_RS13825 at 2791.221 kb on - strand, within A4249_RS13825 at 2791.221 kb on - strand, within A4249_RS13825 at 2791.221 kb on - strand, within A4249_RS13825 at 2791.221 kb on - strand, within A4249_RS13825 at 2791.221 kb on - strand, within A4249_RS13825 at 2791.222 kb on + strand, within A4249_RS13825 at 2791.222 kb on + strand, within A4249_RS13825 at 2791.222 kb on + strand, within A4249_RS13825 at 2791.222 kb on + strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.223 kb on - strand, within A4249_RS13825 at 2791.259 kb on + strand, within A4249_RS13825 at 2791.260 kb on - strand, within A4249_RS13825 at 2791.310 kb on + strand, within A4249_RS13825 at 2791.310 kb on + strand, within A4249_RS13825 at 2791.311 kb on - strand, within A4249_RS13825 at 2791.311 kb on - strand, within A4249_RS13825 at 2791.311 kb on - strand, within A4249_RS13825 at 2791.354 kb on + strand at 2791.392 kb on + strand at 2791.392 kb on + strand at 2791.392 kb on + strand at 2791.392 kb on + strand at 2791.393 kb on - strand at 2791.393 kb on - strand at 2791.393 kb on - strand at 2791.393 kb on - strand at 2791.393 kb on - strand at 2791.394 kb on + strand at 2791.394 kb on + strand at 2791.394 kb on + strand at 2791.394 kb on + strand at 2791.394 kb on + strand at 2791.395 kb on - strand at 2791.395 kb on - strand at 2791.395 kb on - strand at 2791.395 kb on - strand at 2791.395 kb on - strand at 2791.395 kb on - strand at 2791.436 kb on + strand at 2791.437 kb on - strand at 2791.487 kb on + strand, within A4249_RS13830 at 2791.487 kb on + strand, within A4249_RS13830 at 2791.487 kb on + strand, within A4249_RS13830 at 2791.487 kb on + strand, within A4249_RS13830 at 2791.487 kb on + strand, within A4249_RS13830 at 2791.488 kb on - strand, within A4249_RS13830 at 2791.488 kb on - strand, within A4249_RS13830 at 2791.488 kb on - strand, within A4249_RS13830 at 2791.488 kb on - strand, within A4249_RS13830 at 2791.488 kb on - strand, within A4249_RS13830 at 2791.488 kb on - strand, within A4249_RS13830 at 2791.676 kb on + strand, within A4249_RS13830 at 2791.676 kb on + strand, within A4249_RS13830 at 2791.676 kb on + strand, within A4249_RS13830 at 2791.676 kb on + strand, within A4249_RS13830 at 2791.677 kb on - strand, within A4249_RS13830 at 2791.677 kb on - strand, within A4249_RS13830 at 2791.677 kb on - strand, within A4249_RS13830 at 2791.677 kb on - strand, within A4249_RS13830 at 2791.678 kb on + strand, within A4249_RS13830 at 2791.678 kb on + strand, within A4249_RS13830 at 2791.678 kb on + strand, within A4249_RS13830 at 2791.679 kb on - strand, within A4249_RS13830 at 2791.679 kb on - strand, within A4249_RS13830 at 2791.679 kb on - strand, within A4249_RS13830 at 2791.679 kb on - strand, within A4249_RS13830 at 2791.679 kb on - strand, within A4249_RS13830 at 2791.679 kb on - strand, within A4249_RS13830 at 2791.694 kb on + strand, within A4249_RS13830 at 2791.694 kb on + strand, within A4249_RS13830 at 2791.694 kb on + strand, within A4249_RS13830 at 2791.694 kb on + strand, within A4249_RS13830 at 2791.694 kb on + strand, within A4249_RS13830 at 2791.695 kb on - strand, within A4249_RS13830 at 2791.695 kb on - strand, within A4249_RS13830 at 2791.695 kb on - strand, within A4249_RS13830 at 2791.695 kb on - strand, within A4249_RS13830 at 2792.059 kb on + strand, within A4249_RS13835 at 2792.059 kb on + strand, within A4249_RS13835 at 2792.059 kb on + strand, within A4249_RS13835 at 2792.059 kb on + strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.060 kb on - strand, within A4249_RS13835 at 2792.083 kb on + strand, within A4249_RS13835 at 2792.083 kb on + strand, within A4249_RS13835 at 2792.084 kb on - strand, within A4249_RS13835 at 2792.284 kb on + strand, within A4249_RS13835 at 2792.284 kb on + strand, within A4249_RS13835 at 2792.284 kb on + strand, within A4249_RS13835 at 2792.285 kb on - strand, within A4249_RS13835 at 2792.285 kb on - strand, within A4249_RS13835 at 2792.285 kb on - strand, within A4249_RS13835 at 2792.285 kb on - strand, within A4249_RS13835 at 2792.333 kb on - strand, within A4249_RS13835 at 2792.387 kb on - strand, within A4249_RS13835 at 2792.387 kb on - strand, within A4249_RS13835 at 2792.387 kb on - strand, within A4249_RS13835 at 2792.387 kb on - strand, within A4249_RS13835 at 2792.513 kb on + strand at 2792.513 kb on + strand at 2792.513 kb on + strand at 2792.513 kb on + strand at 2792.513 kb on + strand at 2792.513 kb on + strand at 2792.513 kb on + strand at 2792.513 kb on + strand at 2792.514 kb on - strand at 2792.514 kb on - strand at 2792.514 kb on - strand at 2792.514 kb on - strand at 2792.514 kb on - strand at 2792.514 kb on - strand at 2792.514 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 30C remove 2,791,073 - +0.2 2,791,220 + A4249_RS13825 0.46 -0.1 2,791,220 + A4249_RS13825 0.46 -1.1 2,791,220 + A4249_RS13825 0.46 -1.2 2,791,220 + A4249_RS13825 0.46 +0.5 2,791,220 + A4249_RS13825 0.46 -0.1 2,791,220 + A4249_RS13825 0.46 -1.6 2,791,220 + A4249_RS13825 0.46 -0.6 2,791,220 + A4249_RS13825 0.46 -1.9 2,791,220 + A4249_RS13825 0.46 -0.6 2,791,220 + A4249_RS13825 0.46 -0.6 2,791,220 + A4249_RS13825 0.46 -1.6 2,791,220 + A4249_RS13825 0.46 -1.5 2,791,220 + A4249_RS13825 0.46 +0.1 2,791,221 - A4249_RS13825 0.47 -1.3 2,791,221 - A4249_RS13825 0.47 -0.1 2,791,221 - A4249_RS13825 0.47 -0.8 2,791,221 - A4249_RS13825 0.47 -1.9 2,791,221 - A4249_RS13825 0.47 -0.7 2,791,221 - A4249_RS13825 0.47 +0.0 2,791,221 - A4249_RS13825 0.47 -1.2 2,791,222 + A4249_RS13825 0.47 -0.3 2,791,222 + A4249_RS13825 0.47 -0.6 2,791,222 + A4249_RS13825 0.47 -0.3 2,791,222 + A4249_RS13825 0.47 -0.3 2,791,223 - A4249_RS13825 0.47 -0.9 2,791,223 - A4249_RS13825 0.47 -0.9 2,791,223 - A4249_RS13825 0.47 -0.9 2,791,223 - A4249_RS13825 0.47 -0.9 2,791,223 - A4249_RS13825 0.47 -0.0 2,791,223 - A4249_RS13825 0.47 -0.1 2,791,223 - A4249_RS13825 0.47 +0.5 2,791,223 - A4249_RS13825 0.47 -0.6 2,791,223 - A4249_RS13825 0.47 -0.7 2,791,259 + A4249_RS13825 0.62 -0.3 2,791,260 - A4249_RS13825 0.63 +1.2 2,791,310 + A4249_RS13825 0.84 -0.2 2,791,310 + A4249_RS13825 0.84 +0.1 2,791,311 - A4249_RS13825 0.84 -0.1 2,791,311 - A4249_RS13825 0.84 -0.0 2,791,311 - A4249_RS13825 0.84 -0.4 2,791,354 + -0.3 2,791,392 + -0.0 2,791,392 + +0.1 2,791,392 + -0.7 2,791,392 + -0.9 2,791,393 - -0.2 2,791,393 - +0.3 2,791,393 - -0.3 2,791,393 - -0.4 2,791,393 - +2.1 2,791,394 + -0.5 2,791,394 + -0.2 2,791,394 + +0.6 2,791,394 + +0.5 2,791,394 + -1.3 2,791,395 - +0.5 2,791,395 - -0.1 2,791,395 - +0.0 2,791,395 - -1.0 2,791,395 - -0.4 2,791,395 - +1.1 2,791,436 + +0.1 2,791,437 - +1.2 2,791,487 + A4249_RS13830 0.13 -0.4 2,791,487 + A4249_RS13830 0.13 -0.3 2,791,487 + A4249_RS13830 0.13 -0.4 2,791,487 + A4249_RS13830 0.13 -0.1 2,791,487 + A4249_RS13830 0.13 -1.7 2,791,488 - A4249_RS13830 0.13 -0.5 2,791,488 - A4249_RS13830 0.13 -0.5 2,791,488 - A4249_RS13830 0.13 -0.8 2,791,488 - A4249_RS13830 0.13 +0.7 2,791,488 - A4249_RS13830 0.13 +0.2 2,791,488 - A4249_RS13830 0.13 -1.4 2,791,676 + A4249_RS13830 0.56 -0.2 2,791,676 + A4249_RS13830 0.56 -0.9 2,791,676 + A4249_RS13830 0.56 +0.2 2,791,676 + A4249_RS13830 0.56 -0.3 2,791,677 - A4249_RS13830 0.56 +1.3 2,791,677 - A4249_RS13830 0.56 -0.5 2,791,677 - A4249_RS13830 0.56 +0.1 2,791,677 - A4249_RS13830 0.56 +0.2 2,791,678 + A4249_RS13830 0.56 -1.0 2,791,678 + A4249_RS13830 0.56 +0.5 2,791,678 + A4249_RS13830 0.56 -0.2 2,791,679 - A4249_RS13830 0.56 +0.9 2,791,679 - A4249_RS13830 0.56 +0.9 2,791,679 - A4249_RS13830 0.56 -0.4 2,791,679 - A4249_RS13830 0.56 -0.4 2,791,679 - A4249_RS13830 0.56 -0.5 2,791,679 - A4249_RS13830 0.56 -3.7 2,791,694 + A4249_RS13830 0.60 +1.2 2,791,694 + A4249_RS13830 0.60 -0.3 2,791,694 + A4249_RS13830 0.60 -0.1 2,791,694 + A4249_RS13830 0.60 -0.4 2,791,694 + A4249_RS13830 0.60 +0.9 2,791,695 - A4249_RS13830 0.60 +2.8 2,791,695 - A4249_RS13830 0.60 +0.5 2,791,695 - A4249_RS13830 0.60 -0.2 2,791,695 - A4249_RS13830 0.60 -0.4 2,792,059 + A4249_RS13835 0.31 -0.3 2,792,059 + A4249_RS13835 0.31 -0.9 2,792,059 + A4249_RS13835 0.31 +0.5 2,792,059 + A4249_RS13835 0.31 +0.3 2,792,060 - A4249_RS13835 0.31 +1.0 2,792,060 - A4249_RS13835 0.31 -0.4 2,792,060 - A4249_RS13835 0.31 +0.5 2,792,060 - A4249_RS13835 0.31 +0.1 2,792,060 - A4249_RS13835 0.31 +2.1 2,792,060 - A4249_RS13835 0.31 -0.6 2,792,060 - A4249_RS13835 0.31 +0.5 2,792,060 - A4249_RS13835 0.31 +0.0 2,792,060 - A4249_RS13835 0.31 +0.5 2,792,060 - A4249_RS13835 0.31 -0.0 2,792,060 - A4249_RS13835 0.31 -0.7 2,792,083 + A4249_RS13835 0.34 +2.1 2,792,083 + A4249_RS13835 0.34 -2.1 2,792,084 - A4249_RS13835 0.35 +1.1 2,792,284 + A4249_RS13835 0.67 +1.7 2,792,284 + A4249_RS13835 0.67 -0.3 2,792,284 + A4249_RS13835 0.67 -0.3 2,792,285 - A4249_RS13835 0.67 -0.1 2,792,285 - A4249_RS13835 0.67 -2.5 2,792,285 - A4249_RS13835 0.67 +1.0 2,792,285 - A4249_RS13835 0.67 +0.1 2,792,333 - A4249_RS13835 0.75 -0.5 2,792,387 - A4249_RS13835 0.84 +0.9 2,792,387 - A4249_RS13835 0.84 -1.0 2,792,387 - A4249_RS13835 0.84 +0.3 2,792,387 - A4249_RS13835 0.84 -0.0 2,792,513 + -0.1 2,792,513 + -0.1 2,792,513 + -0.2 2,792,513 + -0.5 2,792,513 + +1.1 2,792,513 + -0.5 2,792,513 + +0.5 2,792,513 + +1.7 2,792,514 - +1.5 2,792,514 - +0.1 2,792,514 - -2.1 2,792,514 - -0.3 2,792,514 - -1.1 2,792,514 - -0.5 2,792,514 - -2.9
Or see this region's nucleotide sequence