Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13210

Experiment: Tween 20 (C), 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13200 and A4249_RS13205 are separated by 161 nucleotidesA4249_RS13205 and A4249_RS13210 are separated by 39 nucleotidesA4249_RS13210 and A4249_RS13215 are separated by 49 nucleotides A4249_RS13200: A4249_RS13200 - thiamine pyrophosphate-dependent enzyme, at 2,659,993 to 2,661,228 _RS13200 A4249_RS13205: A4249_RS13205 - Lrp/AsnC family transcriptional regulator, at 2,661,390 to 2,661,878 _RS13205 A4249_RS13210: A4249_RS13210 - pirin family protein, at 2,661,918 to 2,662,856 _RS13210 A4249_RS13215: A4249_RS13215 - hypothetical protein, at 2,662,906 to 2,663,871 _RS13215 Position (kb) 2661 2662 2663Strain fitness (log2 ratio) -2 -1 0 1 2at 2661.232 kb on - strandat 2661.295 kb on - strandat 2661.597 kb on + strand, within A4249_RS13205at 2661.597 kb on + strand, within A4249_RS13205at 2661.597 kb on + strand, within A4249_RS13205at 2661.597 kb on + strand, within A4249_RS13205at 2661.598 kb on - strand, within A4249_RS13205at 2661.598 kb on - strand, within A4249_RS13205at 2661.598 kb on - strand, within A4249_RS13205at 2661.613 kb on + strand, within A4249_RS13205at 2661.613 kb on + strand, within A4249_RS13205at 2661.613 kb on + strand, within A4249_RS13205at 2661.613 kb on + strand, within A4249_RS13205at 2661.614 kb on - strand, within A4249_RS13205at 2661.614 kb on - strand, within A4249_RS13205at 2661.614 kb on - strand, within A4249_RS13205at 2661.614 kb on - strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.711 kb on + strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.712 kb on - strand, within A4249_RS13205at 2661.826 kb on + strand, within A4249_RS13205at 2661.826 kb on + strand, within A4249_RS13205at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.113 kb on + strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.114 kb on - strand, within A4249_RS13210at 2662.269 kb on - strand, within A4249_RS13210at 2662.269 kb on - strand, within A4249_RS13210at 2662.353 kb on + strand, within A4249_RS13210at 2662.398 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.440 kb on + strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.441 kb on - strand, within A4249_RS13210at 2662.443 kb on - strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.524 kb on + strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.525 kb on - strand, within A4249_RS13210at 2662.546 kb on - strand, within A4249_RS13210at 2662.854 kb on + strandat 2662.855 kb on - strandat 2662.894 kb on + strandat 2662.894 kb on + strandat 2662.895 kb on - strandat 2662.895 kb on - strandat 2662.895 kb on - strandat 2662.905 kb on + strandat 2662.905 kb on + strandat 2662.905 kb on + strandat 2663.347 kb on + strand, within A4249_RS13215at 2663.348 kb on - strand, within A4249_RS13215at 2663.348 kb on - strand, within A4249_RS13215at 2663.644 kb on + strand, within A4249_RS13215

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 30C
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2,661,232 - -0.3
2,661,295 - -0.1
2,661,597 + A4249_RS13205 0.42 +0.0
2,661,597 + A4249_RS13205 0.42 +0.7
2,661,597 + A4249_RS13205 0.42 -0.0
2,661,597 + A4249_RS13205 0.42 -0.3
2,661,598 - A4249_RS13205 0.43 -1.1
2,661,598 - A4249_RS13205 0.43 +0.5
2,661,598 - A4249_RS13205 0.43 +0.9
2,661,613 + A4249_RS13205 0.46 -0.1
2,661,613 + A4249_RS13205 0.46 +0.5
2,661,613 + A4249_RS13205 0.46 +0.2
2,661,613 + A4249_RS13205 0.46 -0.0
2,661,614 - A4249_RS13205 0.46 -1.9
2,661,614 - A4249_RS13205 0.46 -1.4
2,661,614 - A4249_RS13205 0.46 -0.9
2,661,614 - A4249_RS13205 0.46 -0.5
2,661,711 + A4249_RS13205 0.66 -1.5
2,661,711 + A4249_RS13205 0.66 -0.6
2,661,711 + A4249_RS13205 0.66 +2.2
2,661,711 + A4249_RS13205 0.66 +0.5
2,661,711 + A4249_RS13205 0.66 -1.0
2,661,711 + A4249_RS13205 0.66 -1.1
2,661,711 + A4249_RS13205 0.66 +1.7
2,661,711 + A4249_RS13205 0.66 -2.3
2,661,711 + A4249_RS13205 0.66 +2.0
2,661,711 + A4249_RS13205 0.66 -1.1
2,661,711 + A4249_RS13205 0.66 +0.5
2,661,712 - A4249_RS13205 0.66 -1.3
2,661,712 - A4249_RS13205 0.66 -1.3
2,661,712 - A4249_RS13205 0.66 -0.1
2,661,712 - A4249_RS13205 0.66 -0.5
2,661,712 - A4249_RS13205 0.66 -0.3
2,661,712 - A4249_RS13205 0.66 -1.1
2,661,712 - A4249_RS13205 0.66 +0.5
2,661,712 - A4249_RS13205 0.66 +1.5
2,661,712 - A4249_RS13205 0.66 -0.1
2,661,712 - A4249_RS13205 0.66 -0.9
2,661,712 - A4249_RS13205 0.66 -2.3
2,661,712 - A4249_RS13205 0.66 -0.2
2,661,712 - A4249_RS13205 0.66 +0.2
2,661,712 - A4249_RS13205 0.66 -0.5
2,661,712 - A4249_RS13205 0.66 -0.3
2,661,826 + A4249_RS13205 0.89 -1.3
2,661,826 + A4249_RS13205 0.89 -2.4
2,662,113 + A4249_RS13210 0.21 -1.0
2,662,113 + A4249_RS13210 0.21 -0.6
2,662,113 + A4249_RS13210 0.21 +0.5
2,662,113 + A4249_RS13210 0.21 -0.1
2,662,113 + A4249_RS13210 0.21 -0.4
2,662,113 + A4249_RS13210 0.21 +0.0
2,662,113 + A4249_RS13210 0.21 +1.5
2,662,113 + A4249_RS13210 0.21 -1.0
2,662,113 + A4249_RS13210 0.21 -2.1
2,662,113 + A4249_RS13210 0.21 -1.1
2,662,113 + A4249_RS13210 0.21 +0.4
2,662,113 + A4249_RS13210 0.21 +0.9
2,662,113 + A4249_RS13210 0.21 +1.4
2,662,113 + A4249_RS13210 0.21 -0.6
2,662,113 + A4249_RS13210 0.21 +2.6
2,662,113 + A4249_RS13210 0.21 -1.1
2,662,113 + A4249_RS13210 0.21 -0.4
2,662,114 - A4249_RS13210 0.21 +0.0
2,662,114 - A4249_RS13210 0.21 +0.1
2,662,114 - A4249_RS13210 0.21 +0.5
2,662,114 - A4249_RS13210 0.21 -0.3
2,662,114 - A4249_RS13210 0.21 +0.7
2,662,114 - A4249_RS13210 0.21 +1.4
2,662,114 - A4249_RS13210 0.21 +0.5
2,662,114 - A4249_RS13210 0.21 +0.9
2,662,114 - A4249_RS13210 0.21 -0.1
2,662,114 - A4249_RS13210 0.21 -1.1
2,662,114 - A4249_RS13210 0.21 -0.2
2,662,114 - A4249_RS13210 0.21 +0.5
2,662,269 - A4249_RS13210 0.37 -0.6
2,662,269 - A4249_RS13210 0.37 +0.1
2,662,353 + A4249_RS13210 0.46 +1.1
2,662,398 + A4249_RS13210 0.51 -1.1
2,662,440 + A4249_RS13210 0.56 +0.8
2,662,440 + A4249_RS13210 0.56 +1.5
2,662,440 + A4249_RS13210 0.56 -1.3
2,662,440 + A4249_RS13210 0.56 +0.9
2,662,440 + A4249_RS13210 0.56 -0.0
2,662,440 + A4249_RS13210 0.56 -1.0
2,662,440 + A4249_RS13210 0.56 -1.4
2,662,440 + A4249_RS13210 0.56 -0.1
2,662,440 + A4249_RS13210 0.56 +1.5
2,662,440 + A4249_RS13210 0.56 -0.5
2,662,441 - A4249_RS13210 0.56 -0.3
2,662,441 - A4249_RS13210 0.56 +1.0
2,662,441 - A4249_RS13210 0.56 -0.2
2,662,441 - A4249_RS13210 0.56 -0.1
2,662,441 - A4249_RS13210 0.56 +0.8
2,662,441 - A4249_RS13210 0.56 +0.5
2,662,441 - A4249_RS13210 0.56 +0.9
2,662,441 - A4249_RS13210 0.56 +1.9
2,662,441 - A4249_RS13210 0.56 +0.6
2,662,441 - A4249_RS13210 0.56 -0.4
2,662,441 - A4249_RS13210 0.56 -0.1
2,662,441 - A4249_RS13210 0.56 +0.2
2,662,441 - A4249_RS13210 0.56 -0.4
2,662,441 - A4249_RS13210 0.56 +0.2
2,662,441 - A4249_RS13210 0.56 +0.1
2,662,441 - A4249_RS13210 0.56 -0.0
2,662,441 - A4249_RS13210 0.56 -1.0
2,662,441 - A4249_RS13210 0.56 +0.0
2,662,441 - A4249_RS13210 0.56 +0.0
2,662,441 - A4249_RS13210 0.56 -0.3
2,662,441 - A4249_RS13210 0.56 +1.5
2,662,441 - A4249_RS13210 0.56 -0.7
2,662,441 - A4249_RS13210 0.56 +0.1
2,662,441 - A4249_RS13210 0.56 +0.4
2,662,441 - A4249_RS13210 0.56 -0.5
2,662,443 - A4249_RS13210 0.56 +0.2
2,662,524 + A4249_RS13210 0.65 -0.3
2,662,524 + A4249_RS13210 0.65 -0.8
2,662,524 + A4249_RS13210 0.65 +0.1
2,662,524 + A4249_RS13210 0.65 -0.2
2,662,524 + A4249_RS13210 0.65 +1.0
2,662,524 + A4249_RS13210 0.65 +0.2
2,662,524 + A4249_RS13210 0.65 +0.0
2,662,524 + A4249_RS13210 0.65 +1.1
2,662,525 - A4249_RS13210 0.65 +0.2
2,662,525 - A4249_RS13210 0.65 -0.0
2,662,525 - A4249_RS13210 0.65 +0.5
2,662,525 - A4249_RS13210 0.65 +0.3
2,662,525 - A4249_RS13210 0.65 +1.2
2,662,525 - A4249_RS13210 0.65 +1.6
2,662,525 - A4249_RS13210 0.65 +0.3
2,662,525 - A4249_RS13210 0.65 +0.0
2,662,546 - A4249_RS13210 0.67 +1.3
2,662,854 + +1.2
2,662,855 - -0.9
2,662,894 + -0.6
2,662,894 + +0.2
2,662,895 - +0.0
2,662,895 - +1.8
2,662,895 - +0.3
2,662,905 + -0.1
2,662,905 + +1.7
2,662,905 + +0.2
2,663,347 + A4249_RS13215 0.46 +1.0
2,663,348 - A4249_RS13215 0.46 -1.1
2,663,348 - A4249_RS13215 0.46 +0.5
2,663,644 + A4249_RS13215 0.76 -1.5

Or see this region's nucleotide sequence