Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11755

Experiment: Tween 20 (C), 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11750 and A4249_RS11755 are separated by 8 nucleotidesA4249_RS11755 and A4249_RS11760 overlap by 1 nucleotides A4249_RS11750: A4249_RS11750 - CusA/CzcA family heavy metal efflux RND transporter, at 2,358,606 to 2,361,830 _RS11750 A4249_RS11755: A4249_RS11755 - efflux RND transporter periplasmic adaptor subunit, at 2,361,839 to 2,363,041 _RS11755 A4249_RS11760: A4249_RS11760 - TolC family protein, at 2,363,041 to 2,364,294 _RS11760 Position (kb) 2361 2362 2363 2364Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2361.079 kb on + strand, within A4249_RS11750at 2361.079 kb on + strand, within A4249_RS11750at 2361.079 kb on + strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.182 kb on - strand, within A4249_RS11750at 2361.193 kb on + strand, within A4249_RS11750at 2361.193 kb on + strand, within A4249_RS11750at 2361.194 kb on - strand, within A4249_RS11750at 2361.194 kb on - strand, within A4249_RS11750at 2361.277 kb on + strand, within A4249_RS11750at 2361.277 kb on + strand, within A4249_RS11750at 2361.277 kb on + strand, within A4249_RS11750at 2361.278 kb on - strand, within A4249_RS11750at 2361.278 kb on - strand, within A4249_RS11750at 2361.278 kb on - strand, within A4249_RS11750at 2361.328 kb on + strand, within A4249_RS11750at 2361.328 kb on + strand, within A4249_RS11750at 2361.329 kb on - strand, within A4249_RS11750at 2361.520 kb on + strandat 2361.520 kb on + strandat 2361.520 kb on + strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.605 kb on + strandat 2361.606 kb on - strandat 2361.632 kb on - strandat 2361.729 kb on + strandat 2361.729 kb on + strandat 2361.730 kb on - strandat 2361.730 kb on - strandat 2361.745 kb on + strandat 2361.745 kb on + strandat 2361.745 kb on + strandat 2361.746 kb on - strandat 2361.746 kb on - strandat 2361.746 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.840 kb on + strandat 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.746 kb on - strand, within A4249_RS11755at 2363.219 kb on + strand, within A4249_RS11760at 2363.472 kb on + strand, within A4249_RS11760at 2363.672 kb on + strand, within A4249_RS11760at 2363.672 kb on + strand, within A4249_RS11760at 2363.673 kb on - strand, within A4249_RS11760at 2363.673 kb on - strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.870 kb on + strand, within A4249_RS11760at 2363.871 kb on - strand, within A4249_RS11760at 2363.871 kb on - strand, within A4249_RS11760

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 30C
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2,361,079 + A4249_RS11750 0.77 +0.3
2,361,079 + A4249_RS11750 0.77 -0.1
2,361,079 + A4249_RS11750 0.77 +1.0
2,361,080 - A4249_RS11750 0.77 +0.2
2,361,080 - A4249_RS11750 0.77 -1.2
2,361,080 - A4249_RS11750 0.77 -0.7
2,361,080 - A4249_RS11750 0.77 +1.0
2,361,181 + A4249_RS11750 0.80 -0.7
2,361,181 + A4249_RS11750 0.80 -0.1
2,361,181 + A4249_RS11750 0.80 -0.6
2,361,181 + A4249_RS11750 0.80 +0.4
2,361,181 + A4249_RS11750 0.80 -0.2
2,361,181 + A4249_RS11750 0.80 +1.5
2,361,182 - A4249_RS11750 0.80 -3.1
2,361,193 + A4249_RS11750 0.80 +0.4
2,361,193 + A4249_RS11750 0.80 -0.9
2,361,194 - A4249_RS11750 0.80 -0.2
2,361,194 - A4249_RS11750 0.80 -0.2
2,361,277 + A4249_RS11750 0.83 +0.4
2,361,277 + A4249_RS11750 0.83 +1.1
2,361,277 + A4249_RS11750 0.83 -0.2
2,361,278 - A4249_RS11750 0.83 -0.4
2,361,278 - A4249_RS11750 0.83 +1.0
2,361,278 - A4249_RS11750 0.83 -0.3
2,361,328 + A4249_RS11750 0.84 +0.4
2,361,328 + A4249_RS11750 0.84 -0.6
2,361,329 - A4249_RS11750 0.84 -1.2
2,361,520 + -1.1
2,361,520 + -0.6
2,361,520 + +0.4
2,361,521 - +0.5
2,361,521 - -0.0
2,361,521 - -0.1
2,361,521 - +0.2
2,361,521 - +1.3
2,361,521 - -0.7
2,361,605 + +0.2
2,361,606 - -1.3
2,361,632 - +1.4
2,361,729 + -0.4
2,361,729 + +1.0
2,361,730 - +1.0
2,361,730 - +0.4
2,361,745 + -1.7
2,361,745 + +0.2
2,361,745 + -0.9
2,361,746 - +0.4
2,361,746 - -0.3
2,361,746 - -0.8
2,361,816 - -0.3
2,361,816 - -0.0
2,361,816 - -0.6
2,361,816 - +0.9
2,361,816 - -0.5
2,361,840 + -1.0
2,362,554 + A4249_RS11755 0.59 +2.5
2,362,554 + A4249_RS11755 0.59 +1.4
2,362,554 + A4249_RS11755 0.59 -0.6
2,362,554 + A4249_RS11755 0.59 +0.3
2,362,555 - A4249_RS11755 0.60 -1.4
2,362,555 - A4249_RS11755 0.60 -1.5
2,362,555 - A4249_RS11755 0.60 -1.7
2,362,555 - A4249_RS11755 0.60 -1.8
2,362,555 - A4249_RS11755 0.60 -0.3
2,362,555 - A4249_RS11755 0.60 +0.8
2,362,746 - A4249_RS11755 0.75 -1.3
2,363,219 + A4249_RS11760 0.14 +1.7
2,363,472 + A4249_RS11760 0.34 -0.3
2,363,672 + A4249_RS11760 0.50 -0.0
2,363,672 + A4249_RS11760 0.50 +1.0
2,363,673 - A4249_RS11760 0.50 +0.4
2,363,673 - A4249_RS11760 0.50 +0.1
2,363,870 + A4249_RS11760 0.66 +0.1
2,363,870 + A4249_RS11760 0.66 +0.7
2,363,870 + A4249_RS11760 0.66 +0.3
2,363,870 + A4249_RS11760 0.66 +1.8
2,363,871 - A4249_RS11760 0.66 +0.8
2,363,871 - A4249_RS11760 0.66 -0.4

Or see this region's nucleotide sequence